RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 HOXC10Q9NYD6 342 aa13.62□□□□□ -0.23
TMEM170A-205ENST00000568559 DNM3Q9UQ16 869 aa13.62□□□□□ -0.23
TMEM170A-205ENST00000568559 ZNF541Q9H0D2 1346 aa13.62□□□□□ -0.23
TMEM170A-205ENST00000568559 TNNT1P13805 278 aa13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 MTIF2P46199 727 aaKnown RBP13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 TCERG1LQ5VWI1 586 aa13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 SCYL3Q8IZE3 742 aa13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 C2orf69Q8N8R5 385 aa13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 RIC8AQ9NPQ8 531 aa13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 WDR46O15213 610 aaKnown RBP13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 MYCP01106 439 aaPredicted RBP13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 EIF2AK2P19525 551 aaKnown RBP13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 KCNA3P22001 575 aa13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 NLRP12P59046 1061 aa13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 CYP4A11Q02928 519 aa13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 GRAMD1CQ8IYS0 662 aa13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 TRPM4Q8TD43 1214 aa13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 GOLPH3LQ9H4A5 285 aa13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 PCDHA5Q9Y5H7 936 aa13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 TAF1P21675 1872 aa13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 AP3B2Q13367 1082 aa13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 LONRF3Q496Y0 759 aa13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 NOM1Q5C9Z4 860 aaKnown RBP13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 SNRNP48Q6IEG0 339 aaKnown RBP13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 NLRX1Q86UT6 975 aa13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 TMX2Q9Y320 296 aa13.61□□□□□ -0.23
TMEM170A-205ENST00000568559 FAM13AO94988 1023 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 FGFR1OPO95684 399 aaKnown RBP13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 OSBPP22059 807 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 UBASH3AP57075 661 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 GABPAQ06546 454 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 ARL6IP4Q66PJ3 421 aaKnown RBP13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 MAEAQ7L5Y9 396 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 SYCP3Q8IZU3 236 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 C10orf71Q711Q0 1435 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 NPM3O75607 178 aaKnown RBP13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 SHROOM1Q2M3G4 852 aaPredicted RBP13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 PPP4R3AQ6IN85 833 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 PNMA8AQ86V59 439 aaPredicted RBP13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 ZMYND12Q9H0C1 365 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 NT5C3AQ9H0P0 336 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 MYL5Q02045 173 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 TDP2O95551 362 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 ARHGAP4P98171 946 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 CCDC40Q4G0X9 1142 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 LRCH2Q5VUJ6 765 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 RNF207Q6ZRF8 634 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 TMC6Q7Z403 805 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 CCDC65Q8IXS2 484 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 GINS2Q9Y248 185 aa13.6□□□□□ -0.23
TMEM170A-205ENST00000568559 RESP18Q5W5W9 173 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 STXBP4Q6ZWJ1 553 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 SH3BP5LQ7L8J4 393 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 AK8Q96MA6 479 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 TRERF1Q96PN7 1200 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 C19orf81C9J6K1 198 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 N4BP3O15049 544 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 CYTH3O43739 400 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 GNPTABQ3T906 1256 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 MIER3Q7Z3K6 550 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 MLKLQ8NB16 471 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 ZNF577Q9BSK1 485 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 RNF146Q9NTX7 359 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 ADM5C9JUS6 153 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 KCTD2Q14681 263 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 COG2Q14746 738 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 POTEDQ86YR6 584 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 DEF6Q9H4E7 631 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 KIAA1024Q9UPX6 916 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 ABCB11O95342 1321 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 SCN7AQ01118 1682 aa13.59□□□□□ -0.23
TMEM170A-205ENST00000568559 SHC4Q6S5L8 630 aa13.58□□□□□ -0.23
TMEM170A-205ENST00000568559 RBM46Q8TBY0 533 aaKnown RBP13.58□□□□□ -0.23
TMEM170A-205ENST00000568559 RIOX1Q9H6W3 641 aa13.58□□□□□ -0.23
TMEM170A-205ENST00000568559 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.58□□□□□ -0.23
TMEM170A-205ENST00000568559 N4BP2Q86UW6 1770 aaPredicted RBP13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 HERC4Q5GLZ8 1057 aaPredicted RBP13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 FKBP15Q5T1M5 1219 aa13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 GMCL1P1Q8NEA9 526 aa13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 GMCL1Q96IK5 515 aa13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 TIGD1Q96MW7 591 aa13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 TEKT3Q9BXF9 490 aa13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 TBC1D7Q9P0N9 293 aa13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 CTNND2Q9UQB3 1225 aa13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 BRWD3Q6RI45 1802 aa13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 ARHGEF35A5YM69 484 aa13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 SLFN14P0C7P3 912 aa13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 VEGFAP15692 232 aaPredicted RBP13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 SFPQP23246 707 aaKnown RBP eCLIP13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 USP8P40818 1118 aa13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 CDAN1Q8IWY9 1227 aa13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 STK24Q9Y6E0 443 aa13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 ASTN2O75129 1339 aaPredicted RBP13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 KDM3AQ9Y4C1 1321 aa13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 TRMT44Q8IYL2 757 aaKnown RBP13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 ZNHIT6Q9NWK9 470 aaKnown RBP13.58□□□□□ -0.24
TMEM170A-205ENST00000568559 ATP2C1P98194 919 aaPredicted RBP13.57□□□□□ -0.24
TMEM170A-205ENST00000568559 ANKRD13AQ8IZ07 590 aa13.57□□□□□ -0.24
TMEM170A-205ENST00000568559 FMR1NBQ8N0W7 255 aaPredicted RBP13.57□□□□□ -0.24
TMEM170A-205ENST00000568559 RMDN3Q96TC7 470 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms