RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 PANK2Q9BZ23 570 aa16.64■□□□□ 0.25
COMMD4-221ENST00000567935 LAD1O00515 517 aa16.63■□□□□ 0.25
COMMD4-221ENST00000567935 CTGFP29279 349 aa16.63■□□□□ 0.25
COMMD4-221ENST00000567935 ATP2C1P98194 919 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-221ENST00000567935 ATP2B2Q01814 1243 aa16.63■□□□□ 0.25
COMMD4-221ENST00000567935 MAP3K10Q02779 954 aa16.63■□□□□ 0.25
COMMD4-221ENST00000567935 SEPT2Q15019 361 aa16.63■□□□□ 0.25
COMMD4-221ENST00000567935 STX1AQ16623 288 aa16.63■□□□□ 0.25
COMMD4-221ENST00000567935 SLFN13Q68D06 897 aa16.63■□□□□ 0.25
COMMD4-221ENST00000567935 PIK3AP1Q6ZUJ8 805 aa16.63■□□□□ 0.25
COMMD4-221ENST00000567935 PIGSQ96S52 555 aa16.63■□□□□ 0.25
COMMD4-221ENST00000567935 SH2D4AQ9H788 454 aa16.63■□□□□ 0.25
COMMD4-221ENST00000567935 ARHGEF10LQ9HCE6 1279 aa16.63■□□□□ 0.25
COMMD4-221ENST00000567935 ANO10Q9NW15 660 aa16.63■□□□□ 0.25
COMMD4-221ENST00000567935 PPP2R3BQ9Y5P8 575 aa16.63■□□□□ 0.25
COMMD4-221ENST00000567935 SLC1A4P43007 532 aa16.62■□□□□ 0.25
COMMD4-221ENST00000567935 PRMT2P55345 433 aa16.62■□□□□ 0.25
COMMD4-221ENST00000567935 TRAF1Q13077 416 aa16.62■□□□□ 0.25
COMMD4-221ENST00000567935 KIF22Q14807 665 aa16.62■□□□□ 0.25
COMMD4-221ENST00000567935 MCTP2Q6DN12 878 aa16.62■□□□□ 0.25
COMMD4-221ENST00000567935 KANK3Q6NY19 840 aa16.62■□□□□ 0.25
COMMD4-221ENST00000567935 HOMER1Q86YM7 354 aa16.62■□□□□ 0.25
COMMD4-221ENST00000567935 CKAP2LQ8IYA6 745 aa16.62■□□□□ 0.25
COMMD4-221ENST00000567935 GDF15Q99988 308 aa16.62■□□□□ 0.25
COMMD4-221ENST00000567935 RNF208Q9H0X6 261 aa16.62■□□□□ 0.25
COMMD4-221ENST00000567935 VEZTQ9HBM0 779 aa16.62■□□□□ 0.25
COMMD4-221ENST00000567935 USP25Q9UHP3 1055 aa16.62■□□□□ 0.25
COMMD4-221ENST00000567935 KCNH3Q9ULD8 1083 aa16.62■□□□□ 0.25
COMMD4-221ENST00000567935 PCDHA6Q9UN73 950 aa16.62■□□□□ 0.25
COMMD4-221ENST00000567935 PCDHA8Q9Y5H6 950 aa16.62■□□□□ 0.25
COMMD4-221ENST00000567935 MRVI1Q9Y6F6 885 aa16.62■□□□□ 0.25
COMMD4-221ENST00000567935 FRMPD2Q68DX3 1309 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-221ENST00000567935 SMCO2A6NFE2 343 aa16.61■□□□□ 0.25
COMMD4-221ENST00000567935 FAM196BA6NMK8 535 aa16.61■□□□□ 0.25
COMMD4-221ENST00000567935 ZBTB5O15062 677 aa16.61■□□□□ 0.25
COMMD4-221ENST00000567935 TLR2O60603 784 aa16.61■□□□□ 0.25
COMMD4-221ENST00000567935 GH2P01242 217 aa16.61■□□□□ 0.25
COMMD4-221ENST00000567935 NONOQ15233 471 aaKnown RBP eCLIP16.61■□□□□ 0.25
COMMD4-221ENST00000567935 ZRSR1Q15695 479 aaKnown RBP16.61■□□□□ 0.25
COMMD4-221ENST00000567935 SUPT20HL1Q3ZLR7 823 aa16.61■□□□□ 0.25
COMMD4-221ENST00000567935 EARS2Q5JPH6 523 aaKnown RBP16.61■□□□□ 0.25
COMMD4-221ENST00000567935 TYW1BQ6NUM6 668 aa16.61■□□□□ 0.25
COMMD4-221ENST00000567935 ADGRF4Q8IZF3 695 aa16.61■□□□□ 0.25
COMMD4-221ENST00000567935 RNF214Q8ND24 703 aa16.61■□□□□ 0.25
COMMD4-221ENST00000567935 U2AF1L4Q8WU68 220 aaKnown RBP16.61■□□□□ 0.25
COMMD4-221ENST00000567935 UBA5Q9GZZ9 404 aa16.61■□□□□ 0.25
COMMD4-221ENST00000567935 JMJD4Q9H9V9 463 aa16.61■□□□□ 0.25
COMMD4-221ENST00000567935 GPCPD1Q9NPB8 672 aa16.61■□□□□ 0.25
COMMD4-221ENST00000567935 GDF11O95390 407 aa16.6■□□□□ 0.25
COMMD4-221ENST00000567935 GNRH1P01148 92 aa16.6■□□□□ 0.25
COMMD4-221ENST00000567935 ATP2B1P20020 1258 aa16.6■□□□□ 0.25
COMMD4-221ENST00000567935 GRK4P32298 578 aa16.6■□□□□ 0.25
COMMD4-221ENST00000567935 BMP8BP34820 402 aa16.6■□□□□ 0.25
COMMD4-221ENST00000567935 ADCY7P51828 1080 aa16.6■□□□□ 0.25
COMMD4-221ENST00000567935 CLEC10AQ8IUN9 316 aa16.6■□□□□ 0.25
COMMD4-221ENST00000567935 REXO1Q8N1G1 1221 aaKnown RBP16.6■□□□□ 0.25
COMMD4-221ENST00000567935 HOOK2Q96ED9 719 aa16.6■□□□□ 0.25
COMMD4-221ENST00000567935 NAT10Q9H0A0 1025 aaKnown RBP16.6■□□□□ 0.25
COMMD4-221ENST00000567935 VAT1LQ9HCJ6 419 aa16.6■□□□□ 0.25
COMMD4-221ENST00000567935 GOPCQ9HD26 462 aa16.6■□□□□ 0.25
COMMD4-221ENST00000567935 KIAA1468Q9P260 1216 aa16.6■□□□□ 0.25
COMMD4-221ENST00000567935 SRRDQ9UH36 339 aa16.6■□□□□ 0.25
COMMD4-221ENST00000567935 FAM205CA6NFA0 338 aa16.59■□□□□ 0.25
COMMD4-221ENST00000567935 F5H6K3 240 aa16.59■□□□□ 0.25
COMMD4-221ENST00000567935 PRPHP41219 470 aa16.59■□□□□ 0.25
COMMD4-221ENST00000567935 MRPL12P52815 198 aaKnown RBP16.59■□□□□ 0.25
COMMD4-221ENST00000567935 KLRC3Q07444 240 aa16.59■□□□□ 0.25
COMMD4-221ENST00000567935 PTGDRQ13258 359 aa16.59■□□□□ 0.25
COMMD4-221ENST00000567935 LRIT3Q3SXY7 679 aa16.59■□□□□ 0.25
COMMD4-221ENST00000567935 BTNL9Q6UXG8 535 aa16.59■□□□□ 0.25
COMMD4-221ENST00000567935 RASGRP2Q7LDG7 609 aa16.59■□□□□ 0.25
COMMD4-221ENST00000567935 SIAH1Q8IUQ4 282 aa16.59■□□□□ 0.25
COMMD4-221ENST00000567935 PDLIM2Q96JY6 352 aa16.59■□□□□ 0.25
COMMD4-221ENST00000567935 CLIC6Q96NY7 704 aa16.59■□□□□ 0.25
COMMD4-221ENST00000567935 NAP1L4Q99733 375 aaKnown RBP16.59■□□□□ 0.25
COMMD4-221ENST00000567935 ZBTB21Q9ULJ3 1066 aa16.59■□□□□ 0.25
COMMD4-221ENST00000567935 ALPK3Q96L96 1907 aa16.58■□□□□ 0.25
COMMD4-221ENST00000567935 NDUFB10O96000 172 aa16.58■□□□□ 0.24
COMMD4-221ENST00000567935 ASNSP08243 561 aa16.58■□□□□ 0.24
COMMD4-221ENST00000567935 BMP3P12645 472 aa16.58■□□□□ 0.24
COMMD4-221ENST00000567935 OSBPP22059 807 aa16.58■□□□□ 0.24
COMMD4-221ENST00000567935 LONP1P36776 959 aaKnown RBP16.58■□□□□ 0.24
COMMD4-221ENST00000567935 GTF2A2P52657 109 aa16.58■□□□□ 0.24
COMMD4-221ENST00000567935 ZNF174Q15697 407 aa16.58■□□□□ 0.24
COMMD4-221ENST00000567935 ANO6Q4KMQ2 910 aa16.58■□□□□ 0.24
COMMD4-221ENST00000567935 KRBA2Q6ZNG9 492 aa16.58■□□□□ 0.24
COMMD4-221ENST00000567935 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-221ENST00000567935 CEP57L1Q8IYX8 460 aa16.58■□□□□ 0.24
COMMD4-221ENST00000567935 CNNM3Q8NE01 707 aa16.58■□□□□ 0.24
COMMD4-221ENST00000567935 RAET1EQ8TD07 263 aa16.58■□□□□ 0.24
COMMD4-221ENST00000567935 TRIM47Q96LD4 638 aa16.58■□□□□ 0.24
COMMD4-221ENST00000567935 CPVLQ9H3G5 476 aa16.58■□□□□ 0.24
COMMD4-221ENST00000567935 RIC8AQ9NPQ8 531 aa16.58■□□□□ 0.24
COMMD4-221ENST00000567935 TMX2Q9Y320 296 aa16.58■□□□□ 0.24
COMMD4-221ENST00000567935 PLA2G6O60733 806 aa16.57■□□□□ 0.24
COMMD4-221ENST00000567935 COL9A1P20849 921 aa16.57■□□□□ 0.24
COMMD4-221ENST00000567935 CAP2P40123 477 aa16.57■□□□□ 0.24
COMMD4-221ENST00000567935 TXLNAP40222 546 aa16.57■□□□□ 0.24
COMMD4-221ENST00000567935 ZNF165P49910 485 aa16.57■□□□□ 0.24
COMMD4-221ENST00000567935 HS1BP3Q53T59 392 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms