RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 PWP2Q15269 919 aaKnown RBP22.12■■□□□ 1.13
GTF3C1-207ENST00000567806 DUSP28Q4G0W2 176 aa22.12■■□□□ 1.13
GTF3C1-207ENST00000567806 B4GALNT3Q6L9W6 998 aa22.12■■□□□ 1.13
GTF3C1-207ENST00000567806 MPHOSPH6Q99547 160 aaKnown RBP22.12■■□□□ 1.13
GTF3C1-207ENST00000567806 WDR11Q9BZH6 1224 aa22.12■■□□□ 1.13
GTF3C1-207ENST00000567806 ZNF576Q9H609 170 aa22.12■■□□□ 1.13
GTF3C1-207ENST00000567806 FGBP02675 491 aa22.11■■□□□ 1.13
GTF3C1-207ENST00000567806 CALML3P27482 149 aa22.11■■□□□ 1.13
GTF3C1-207ENST00000567806 TMEM63BQ5T3F8 832 aa22.11■■□□□ 1.13
GTF3C1-207ENST00000567806 RNF207Q6ZRF8 634 aa22.11■■□□□ 1.13
GTF3C1-207ENST00000567806 ESR2Q92731 530 aa22.11■■□□□ 1.13
GTF3C1-207ENST00000567806 TRPV6Q9H1D0 765 aa22.11■■□□□ 1.13
GTF3C1-207ENST00000567806 MTIF3Q9H2K0 278 aaKnown RBP22.11■■□□□ 1.13
GTF3C1-207ENST00000567806 UNC80Q8N2C7 3258 aa22.11■■□□□ 1.13
GTF3C1-207ENST00000567806 GRIN2DO15399 1336 aa22.1■■□□□ 1.13
GTF3C1-207ENST00000567806 GRXCR1A8MXD5 290 aa22.1■■□□□ 1.13
GTF3C1-207ENST00000567806 ZNF213O14771 459 aa22.1■■□□□ 1.13
GTF3C1-207ENST00000567806 SDSP20132 328 aa22.1■■□□□ 1.13
GTF3C1-207ENST00000567806 PSMC6P62333 389 aa22.1■■□□□ 1.13
GTF3C1-207ENST00000567806 ZNF543Q08ER8 600 aa22.1■■□□□ 1.13
GTF3C1-207ENST00000567806 RASIP1Q5U651 963 aa22.1■■□□□ 1.13
GTF3C1-207ENST00000567806 POLR3EQ9NVU0 708 aa22.1■■□□□ 1.13
GTF3C1-207ENST00000567806 B4DLN1 442 aa22.09■■□□□ 1.13
GTF3C1-207ENST00000567806 MRPL12P52815 198 aaKnown RBP22.09■■□□□ 1.13
GTF3C1-207ENST00000567806 PDE4DQ08499 809 aa22.09■■□□□ 1.13
GTF3C1-207ENST00000567806 CLEC4DQ8WXI8 215 aa22.09■■□□□ 1.13
GTF3C1-207ENST00000567806 HERVK_113Q902F9 699 aa22.09■■□□□ 1.13
GTF3C1-207ENST00000567806 GPHNQ9NQX3 736 aaPredicted RBP22.09■■□□□ 1.13
GTF3C1-207ENST00000567806 B4GALT4O60513 344 aa22.08■■□□□ 1.13
GTF3C1-207ENST00000567806 CPT1AP50416 773 aa22.08■■□□□ 1.13
GTF3C1-207ENST00000567806 CCL23P55773 120 aa22.08■■□□□ 1.13
GTF3C1-207ENST00000567806 BRDTQ58F21 947 aaPredicted RBP22.08■■□□□ 1.13
GTF3C1-207ENST00000567806 CCDC178Q5BJE1 867 aa22.08■■□□□ 1.13
GTF3C1-207ENST00000567806 GPATCH4Q5T3I0 446 aaKnown RBP22.08■■□□□ 1.13
GTF3C1-207ENST00000567806 SLC30A10Q6XR72 485 aa22.08■■□□□ 1.13
GTF3C1-207ENST00000567806 TBC1D10CQ8IV04 446 aa22.08■■□□□ 1.13
GTF3C1-207ENST00000567806 SMC5Q8IY18 1101 aa22.08■■□□□ 1.13
GTF3C1-207ENST00000567806 RPUSD2Q8IZ73 545 aaKnown RBP22.08■■□□□ 1.13
GTF3C1-207ENST00000567806 PBX4Q9BYU1 374 aa22.08■■□□□ 1.13
GTF3C1-207ENST00000567806 MSRAQ9UJ68 235 aa22.08■■□□□ 1.13
GTF3C1-207ENST00000567806 RBM47A0AV96 593 aaKnown RBP22.07■■□□□ 1.12
GTF3C1-207ENST00000567806 MYL3P08590 195 aa22.07■■□□□ 1.12
GTF3C1-207ENST00000567806 SUPT20HL2P0C7V6 817 aa22.07■■□□□ 1.12
GTF3C1-207ENST00000567806 SNHG28P0DPA3 235 aa22.07■■□□□ 1.12
GTF3C1-207ENST00000567806 PBX2P40425 430 aa22.07■■□□□ 1.12
GTF3C1-207ENST00000567806 RPS6P62753 249 aaKnown RBP22.07■■□□□ 1.12
GTF3C1-207ENST00000567806 CHD1LQ86WJ1 897 aa22.07■■□□□ 1.12
GTF3C1-207ENST00000567806 DGKHQ86XP1 1220 aa22.07■■□□□ 1.12
GTF3C1-207ENST00000567806 OR6J1Q8NGC5 347 aa22.07■■□□□ 1.12
GTF3C1-207ENST00000567806 ZKSCAN3Q9BRR0 538 aa22.07■■□□□ 1.12
GTF3C1-207ENST00000567806 NOC4LQ9BVI4 516 aaKnown RBP22.07■■□□□ 1.12
GTF3C1-207ENST00000567806 UMODL1Q5DID0 1318 aa22.06■■□□□ 1.12
GTF3C1-207ENST00000567806 WDR19Q8NEZ3 1342 aa22.06■■□□□ 1.12
GTF3C1-207ENST00000567806 NT5C2P49902 561 aa22.06■■□□□ 1.12
GTF3C1-207ENST00000567806 RAB30Q15771 203 aa22.06■■□□□ 1.12
GTF3C1-207ENST00000567806 OTOP2Q7RTS6 562 aa22.06■■□□□ 1.12
GTF3C1-207ENST00000567806 IQCA1Q86XH1 822 aa22.06■■□□□ 1.12
GTF3C1-207ENST00000567806 DNERQ8NFT8 737 aa22.06■■□□□ 1.12
GTF3C1-207ENST00000567806 GAS2L1Q99501 681 aaPredicted RBP22.06■■□□□ 1.12
GTF3C1-207ENST00000567806 ALDH8A1Q9H2A2 487 aaPredicted RBP22.06■■□□□ 1.12
GTF3C1-207ENST00000567806 DIAPH3Q9NSV4 1193 aa22.06■■□□□ 1.12
GTF3C1-207ENST00000567806 NKRFO15226 690 aaKnown RBP eCLIP22.05■■□□□ 1.12
GTF3C1-207ENST00000567806 GOLGA8HP0CJ92 632 aa22.05■■□□□ 1.12
GTF3C1-207ENST00000567806 CWC27Q6UX04 472 aaKnown RBP22.05■■□□□ 1.12
GTF3C1-207ENST00000567806 PLEKHM2Q8IWE5 1019 aa22.05■■□□□ 1.12
GTF3C1-207ENST00000567806 SCFD2Q8WU76 684 aa22.05■■□□□ 1.12
GTF3C1-207ENST00000567806 MTG1Q9BT17 334 aaPredicted RBP22.05■■□□□ 1.12
GTF3C1-207ENST00000567806 UBA5Q9GZZ9 404 aa22.05■■□□□ 1.12
GTF3C1-207ENST00000567806 OSBPL3Q9H4L5 887 aa22.05■■□□□ 1.12
GTF3C1-207ENST00000567806 CXXC1Q9P0U4 656 aaPredicted RBP22.05■■□□□ 1.12
GTF3C1-207ENST00000567806 RAD50Q92878 1312 aa22.05■■□□□ 1.12
GTF3C1-207ENST00000567806 HIP1O00291 1037 aa22.04■■□□□ 1.12
GTF3C1-207ENST00000567806 KPNA6O60684 536 aa22.04■■□□□ 1.12
GTF3C1-207ENST00000567806 PURAQ00577 322 aaKnown RBP22.04■■□□□ 1.12
GTF3C1-207ENST00000567806 PPP2R5BQ15173 497 aa22.04■■□□□ 1.12
GTF3C1-207ENST00000567806 USH1GQ495M9 461 aa22.04■■□□□ 1.12
GTF3C1-207ENST00000567806 RGS22Q8NE09 1264 aa22.04■■□□□ 1.12
GTF3C1-207ENST00000567806 KAT14Q9H8E8 782 aa22.04■■□□□ 1.12
GTF3C1-207ENST00000567806 NEDD4P46934 1319 aa22.04■■□□□ 1.12
GTF3C1-207ENST00000567806 KDM4AO75164 1064 aa22.03■■□□□ 1.12
GTF3C1-207ENST00000567806 NUCB1Q02818 461 aa22.03■■□□□ 1.12
GTF3C1-207ENST00000567806 PNMA1Q8ND90 353 aa22.03■■□□□ 1.12
GTF3C1-207ENST00000567806 SYMPKQ92797 1274 aaKnown RBP22.03■■□□□ 1.12
GTF3C1-207ENST00000567806 TRMT13Q9NUP7 481 aaKnown RBP22.03■■□□□ 1.12
GTF3C1-207ENST00000567806 IGHDP01880 384 aa22.02■■□□□ 1.12
GTF3C1-207ENST00000567806 TXNP10599 105 aaKnown RBP22.02■■□□□ 1.12
GTF3C1-207ENST00000567806 EDNRBP24530 442 aa22.02■■□□□ 1.12
GTF3C1-207ENST00000567806 FAM47CQ5HY64 1035 aa22.02■■□□□ 1.12
GTF3C1-207ENST00000567806 SCLYQ96I15 445 aa22.02■■□□□ 1.12
GTF3C1-207ENST00000567806 WNT8AQ9H1J5 351 aa22.02■■□□□ 1.12
GTF3C1-207ENST00000567806 CPVLQ9H3G5 476 aa22.02■■□□□ 1.12
GTF3C1-207ENST00000567806 PRDM12Q9H4Q4 367 aa22.02■■□□□ 1.12
GTF3C1-207ENST00000567806 SLC28A3Q9HAS3 691 aa22.02■■□□□ 1.12
GTF3C1-207ENST00000567806 CTNNA3Q9UI47 895 aa22.02■■□□□ 1.12
GTF3C1-207ENST00000567806 SLC4A7Q9Y6M7 1214 aa22.02■■□□□ 1.12
GTF3C1-207ENST00000567806 TNKSO95271 1327 aa22.02■■□□□ 1.12
GTF3C1-207ENST00000567806 LRRC37A2A6NM11 1700 aa22.01■■□□□ 1.11
GTF3C1-207ENST00000567806 EYSQ5T1H1 3165 aa22.01■■□□□ 1.11
GTF3C1-207ENST00000567806 ZBBXA8MT70 800 aa22.01■■□□□ 1.11
GTF3C1-207ENST00000567806 CYP2C9P11712 490 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms