RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 MDFIQ99750 246 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 RIOK1Q9BRS2 568 aaKnown RBP6.78□□□□□ -1.32
SF3B3-210ENST00000567654 ALDH8A1Q9H2A2 487 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-210ENST00000567654 LRP2BPQ9P2M1 347 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 POLLQ9UGP5 575 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 DCTN4Q9UJW0 460 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 LIMCH1Q9UPQ0 1083 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 ARFGEF1Q9Y6D6 1849 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 COL4A5P29400 1685 aa6.77□□□□□ -1.32
SF3B3-210ENST00000567654 NEDD4P46934 1319 aa6.77□□□□□ -1.32
SF3B3-210ENST00000567654 PDS5AQ29RF7 1337 aaKnown RBP6.77□□□□□ -1.32
SF3B3-210ENST00000567654 C10orf71Q711Q0 1435 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 BAZ2BQ9UIF8 2168 aaKnown RBP6.77□□□□□ -1.33
SF3B3-210ENST00000567654 MAP3K6O95382 1288 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 PSAPP07602 524 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 ACPPP15309 386 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 PSMA5P28066 241 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 CHRNA5P30532 468 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 MECOMQ03112 1051 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 PLAURQ03405 335 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 APOBRQ0VD83 1088 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 STK3Q13188 491 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 KRT32Q14532 448 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 LRRFIP1Q32MZ4 808 aaKnown RBP6.77□□□□□ -1.33
SF3B3-210ENST00000567654 PDE12Q6L8Q7 609 aaKnown RBP6.77□□□□□ -1.33
SF3B3-210ENST00000567654 C15orf52Q6ZUT6 534 aaKnown RBP6.77□□□□□ -1.33
SF3B3-210ENST00000567654 CHSY3Q70JA7 882 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 CYB5R4Q7L1T6 521 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 TMC7Q7Z402 723 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 FAM35AQ86V20 835 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 MB21D2Q8IYB1 491 aaPredicted RBP6.77□□□□□ -1.33
SF3B3-210ENST00000567654 IFNL3Q8IZI9 196 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 FLAD1Q8NFF5 587 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 TDRD7Q8NHU6 1098 aaKnown RBP6.77□□□□□ -1.33
SF3B3-210ENST00000567654 SDR42E1Q8WUS8 393 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 NUDT8Q8WV74 236 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 FOXD4L4Q8WXT5 416 aaPredicted RBP6.77□□□□□ -1.33
SF3B3-210ENST00000567654 INTS4Q96HW7 963 aaKnown RBP6.77□□□□□ -1.33
SF3B3-210ENST00000567654 BTBD6Q96KE9 485 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 BRIP1Q9BX63 1249 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 AGXT2Q9BYV1 514 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 NIF3L1Q9GZT8 377 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 CHRDQ9H2X0 955 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 RRAGCQ9HB90 399 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 STK32BQ9NY57 414 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 PODXL2Q9NZ53 605 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 RAI14Q9P0K7 980 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 LEMD3Q9Y2U8 911 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 STARD13Q9Y3M8 1113 aa6.77□□□□□ -1.33
SF3B3-210ENST00000567654 GREB1LQ9C091 1923 aaPredicted RBP6.77□□□□□ -1.33
SF3B3-210ENST00000567654 ZMYM6O95789 1325 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 CYP2D7A0A087X1C5 515 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 ADARB2-AS1A8MUL3 147 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 EREGO14944 169 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 JAK2O60674 1132 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 TNFRSF21O75509 655 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 BBOX1O75936 387 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 BAG4O95429 457 aaKnown RBP6.76□□□□□ -1.33
SF3B3-210ENST00000567654 IGHA2P01877 340 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 ALBP02768 609 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 POLR3DP05423 398 aaPredicted RBP6.76□□□□□ -1.33
SF3B3-210ENST00000567654 USP5P45974 858 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 MARSP56192 900 aaKnown RBP6.76□□□□□ -1.33
SF3B3-210ENST00000567654 SNRPNP63162 240 aaKnown RBP6.76□□□□□ -1.33
SF3B3-210ENST00000567654 ALX1Q15699 326 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 IMMTQ16891 758 aaKnown RBP6.76□□□□□ -1.33
SF3B3-210ENST00000567654 NAA16Q6N069 864 aaPredicted RBP6.76□□□□□ -1.33
SF3B3-210ENST00000567654 VPS37DQ86XT2 251 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 OR13H1Q8NG92 308 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 BRF1Q92994 677 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 FAM129BQ96TA1 746 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 CWC22Q9HCG8 908 aaKnown RBP6.76□□□□□ -1.33
SF3B3-210ENST00000567654 CD209Q9NNX6 404 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 C11orf16Q9NQ32 467 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 GNL3LQ9NVN8 582 aaKnown RBP6.76□□□□□ -1.33
SF3B3-210ENST00000567654 ATP6V0A2Q9Y487 856 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 SLC4A4Q9Y6R1 1079 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 SALL1Q9NSC2 1324 aa6.76□□□□□ -1.33
SF3B3-210ENST00000567654 B4E1Z4 1266 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 ZNF213O14771 459 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 PRC1O43663 620 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 TRPA1O75762 1119 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 CTDNEP1O95476 244 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 APPP05067 770 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 RPLP1P05386 114 aaKnown RBP6.75□□□□□ -1.33
SF3B3-210ENST00000567654 IL1R1P14778 569 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 NPR1P16066 1061 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 HOXB4P17483 251 aaPredicted RBP6.75□□□□□ -1.33
SF3B3-210ENST00000567654 EIF2AK2P19525 551 aaKnown RBP6.75□□□□□ -1.33
SF3B3-210ENST00000567654 GJB2P29033 226 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 SCRN1Q12765 414 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 PERM1Q5SV97 790 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 XKR5Q6UX68 686 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 CLEC17AQ6ZS10 378 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 RAB11FIP4Q86YS3 637 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 C2CD5Q86YS7 1000 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 SP8Q8IXZ3 490 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 STK11IPQ8N1F8 1099 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 TRPM4Q8TD43 1214 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 GTF3C6Q969F1 213 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms