RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 RBM8AQ9Y5S9 174 aaKnown RBP8.07□□□□□ -1.12
SF3B3-209ENST00000567635 TRIP12Q14669 1992 aaPredicted RBP8.07□□□□□ -1.12
SF3B3-209ENST00000567635 KAT6AQ92794 2004 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 ELP1O95163 1332 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 ABCB11O95342 1321 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 LTBP2Q14767 1821 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-209ENST00000567635 PALM3A6NDB9 673 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-209ENST00000567635 MYADML2A6NDP7 307 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 SPDYE4A6NLX3 237 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 DCDC2CA8MYV0 355 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 CTAGE5O15320 804 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 DYNC1LI2O43237 492 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-209ENST00000567635 ASGR1P07306 291 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 SMPD1P17405 629 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 ALDH5A1P51649 535 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-209ENST00000567635 RPS6P62753 249 aaKnown RBP8.06□□□□□ -1.12
SF3B3-209ENST00000567635 IRX5P78411 483 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-209ENST00000567635 PDE4DQ08499 809 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 WTAPQ15007 396 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 CDC37Q16543 378 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-209ENST00000567635 QRICH1Q2TAL8 776 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 BMP2KLQ5H9B9 411 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 TMEM67Q5HYA8 995 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 SLC30A10Q6XR72 485 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 FBXO11Q86XK2 927 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 MCF2L2Q86YR7 1114 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 STAG2Q8N3U4 1231 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 DNERQ8NFT8 737 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 IGDCC4Q8TDY8 1250 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 GLT1D1Q96MS3 346 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 TOX2Q96NM4 488 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 ESYT1Q9BSJ8 1104 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 WDR11Q9BZH6 1224 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 JMJD4Q9H9V9 463 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 PRDM5Q9NQX1 630 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-209ENST00000567635 STARD7Q9NQZ5 370 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 PDGFCQ9NRA1 345 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 MAD2L2Q9UI95 211 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 GNEQ9Y223 722 aaKnown RBP8.06□□□□□ -1.12
SF3B3-209ENST00000567635 MRPL11Q9Y3B7 192 aaKnown RBP8.06□□□□□ -1.12
SF3B3-209ENST00000567635 TAF6LQ9Y6J9 622 aa8.06□□□□□ -1.12
SF3B3-209ENST00000567635 DDX49Q9Y6V7 483 aaKnown RBP8.06□□□□□ -1.12
SF3B3-209ENST00000567635 RBM47A0AV96 593 aaKnown RBP8.05□□□□□ -1.12
SF3B3-209ENST00000567635 TRIM43BA6NCK2 446 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 ZEB2O60315 1214 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 CABYRO75952 493 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 CDK7P50613 346 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 BEX3Q00994 111 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 TRAF1Q13077 416 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 GRM4Q14833 912 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 FSCN1Q16658 493 aaKnown RBP8.05□□□□□ -1.12
SF3B3-209ENST00000567635 LRIT3Q3SXY7 679 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 DUSP28Q4G0W2 176 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 STOX1Q6ZVD7 989 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 CHST3Q7LGC8 479 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 ANKRD33Q7Z3H0 272 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 SH3RF1Q7Z6J0 888 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 CATIPQ7Z7H3 387 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 TLK2Q86UE8 772 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 FBXO16Q8IX29 292 aaPredicted RBP8.05□□□□□ -1.12
SF3B3-209ENST00000567635 TDHQ8IZJ6 230 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 TMTC2Q8N394 836 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 TBC1D5Q92609 795 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 TRIM43Q96BQ3 446 aaPredicted RBP8.05□□□□□ -1.12
SF3B3-209ENST00000567635 AMNQ9BXJ7 453 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 LSG1Q9H089 658 aaKnown RBP8.05□□□□□ -1.12
SF3B3-209ENST00000567635 PDLIM7Q9NR12 457 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 TMEM39AQ9NV64 488 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 RANBP2P49792 3224 aaKnown RBP8.05□□□□□ -1.12
SF3B3-209ENST00000567635 LRRC37A2A6NM11 1700 aa8.05□□□□□ -1.12
SF3B3-209ENST00000567635 A0A0U1RQG5 324 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-209ENST00000567635 ARVCFO00192 962 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 SOX1O00570 391 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-209ENST00000567635 SLC27A2O14975 620 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 ZBTB5O15062 677 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 KIAA0355O15063 1070 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 PQBP1O60828 265 aaKnown RBP8.04□□□□□ -1.12
SF3B3-209ENST00000567635 CLTBP09497 229 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 EDNRBP24530 442 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 MCM5P33992 734 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 ANTXR2P58335 489 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 FAAP100Q0VG06 881 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 TROAPQ12815 778 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 NECTIN1Q15223 517 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 TMEM63BQ5T3F8 832 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 CASC1Q6TDU7 716 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 CXCL17Q6UXB2 119 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 SKAP1Q86WV1 359 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 MB21D2Q8IYB1 491 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-209ENST00000567635 SYTL5Q8TDW5 730 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-209ENST00000567635 NSUN6Q8TEA1 469 aaKnown RBP8.04□□□□□ -1.12
SF3B3-209ENST00000567635 BADQ92934 168 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 MTMR8Q96EF0 704 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 CCDC136Q96JN2 1154 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 TAAR1Q96RJ0 339 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 IWS1Q96ST2 819 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 MAP3K14Q99558 947 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 MTA3Q9BTC8 594 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 RIOX1Q9H6W3 641 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms