RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 MC3RP41968 323 aa5.68□□□□□ -1.5
CDH1-211ENST00000567320 SLURP1P55000 103 aa5.68□□□□□ -1.5
CDH1-211ENST00000567320 PLP2Q04941 152 aa5.68□□□□□ -1.5
CDH1-211ENST00000567320 COL9A2Q14055 689 aaPredicted RBP5.68□□□□□ -1.5
CDH1-211ENST00000567320 SKOR2Q2VWA4 1001 aaPredicted RBP5.68□□□□□ -1.5
CDH1-211ENST00000567320 RCSD1Q6JBY9 416 aa5.68□□□□□ -1.5
CDH1-211ENST00000567320 FRMD5Q7Z6J6 570 aa5.68□□□□□ -1.5
CDH1-211ENST00000567320 TP53I13Q8NBR0 393 aaPredicted RBP5.68□□□□□ -1.5
CDH1-211ENST00000567320 CPLX3Q8WVH0 158 aa5.68□□□□□ -1.5
CDH1-211ENST00000567320 TEPSINQ96N21 525 aa5.68□□□□□ -1.5
CDH1-211ENST00000567320 BDH2Q9BUT1 245 aa5.68□□□□□ -1.5
CDH1-211ENST00000567320 NUDT5Q9UKK9 219 aa5.68□□□□□ -1.5
CDH1-211ENST00000567320 C2orf71A6NGG8 1288 aa5.67□□□□□ -1.5
CDH1-211ENST00000567320 SCAMP3O14828 347 aaKnown RBP5.67□□□□□ -1.5
CDH1-211ENST00000567320 AURKAO14965 403 aa5.67□□□□□ -1.5
CDH1-211ENST00000567320 EPHX1P07099 455 aa5.67□□□□□ -1.5
CDH1-211ENST00000567320 ATF2P15336 505 aa5.67□□□□□ -1.5
CDH1-211ENST00000567320 AMPD2Q01433 879 aa5.67□□□□□ -1.5
CDH1-211ENST00000567320 CPNE8Q86YQ8 564 aa5.67□□□□□ -1.5
CDH1-211ENST00000567320 FNIP1Q8TF40 1166 aa5.67□□□□□ -1.5
CDH1-211ENST00000567320 SPATA32Q96LK8 384 aa5.67□□□□□ -1.5
CDH1-211ENST00000567320 RNF38Q9H0F5 515 aa5.67□□□□□ -1.5
CDH1-211ENST00000567320 GULP1Q9UBP9 304 aa5.67□□□□□ -1.5
CDH1-211ENST00000567320 BACE2Q9Y5Z0 518 aa5.67□□□□□ -1.5
CDH1-211ENST00000567320 NPHP3-ACAD11A0A0J9YXS1 232 aa5.66□□□□□ -1.5
CDH1-211ENST00000567320 ASGR2P07307 311 aa5.66□□□□□ -1.5
CDH1-211ENST00000567320 GLI4P10075 376 aa5.66□□□□□ -1.5
CDH1-211ENST00000567320 PAMP19021 973 aa5.66□□□□□ -1.5
CDH1-211ENST00000567320 MFAP1P55081 439 aaKnown RBP5.66□□□□□ -1.5
CDH1-211ENST00000567320 UBXN11Q5T124 520 aa5.66□□□□□ -1.5
CDH1-211ENST00000567320 NT5DC1Q5TFE4 455 aa5.66□□□□□ -1.5
CDH1-211ENST00000567320 DBX2Q6ZNG2 339 aa5.66□□□□□ -1.5
CDH1-211ENST00000567320 NLGN2Q8NFZ4 835 aa5.66□□□□□ -1.5
CDH1-211ENST00000567320 PPP1R14AQ96A00 147 aa5.66□□□□□ -1.5
CDH1-211ENST00000567320 GPRASP2Q96D09 838 aa5.66□□□□□ -1.5
CDH1-211ENST00000567320 SPATA25Q9BR10 227 aa5.66□□□□□ -1.5
CDH1-211ENST00000567320 MCMBPQ9BTE3 642 aa5.66□□□□□ -1.5
CDH1-211ENST00000567320 KLHL25Q9H0H3 589 aa5.66□□□□□ -1.5
CDH1-211ENST00000567320 CGGBP1Q9UFW8 167 aaPredicted RBP5.66□□□□□ -1.5
CDH1-211ENST00000567320 A0A1W2PQH9 124 aa5.65□□□□□ -1.5
CDH1-211ENST00000567320 PLA2G1BP04054 148 aaKnown RBP5.65□□□□□ -1.5
CDH1-211ENST00000567320 PMLP29590 882 aa5.65□□□□□ -1.5
CDH1-211ENST00000567320 LIPIQ6XZB0 460 aa5.65□□□□□ -1.5
CDH1-211ENST00000567320 OR6P1Q8NGX9 317 aa5.65□□□□□ -1.5
CDH1-211ENST00000567320 ZNF526Q8TF50 670 aaPredicted RBP5.65□□□□□ -1.5
CDH1-211ENST00000567320 PEX11GQ96HA9 241 aa5.65□□□□□ -1.5
CDH1-211ENST00000567320 KRTAP9-3Q9BYQ3 159 aa5.65□□□□□ -1.5
CDH1-211ENST00000567320 FUCA1P04066 466 aa5.64□□□□□ -1.51
CDH1-211ENST00000567320 FBLN1P23142 703 aa5.64□□□□□ -1.51
CDH1-211ENST00000567320 SOX9P48436 509 aa5.64□□□□□ -1.51
CDH1-211ENST00000567320 GIPRP48546 466 aa5.64□□□□□ -1.51
CDH1-211ENST00000567320 RTP5Q14D33 572 aa5.64□□□□□ -1.51
CDH1-211ENST00000567320 C9orf131Q5VYM1 1079 aa5.64□□□□□ -1.51
CDH1-211ENST00000567320 KIAA1211LQ6NV74 962 aa5.64□□□□□ -1.51
CDH1-211ENST00000567320 FERMT3Q86UX7 667 aa5.64□□□□□ -1.51
CDH1-211ENST00000567320 SMARCC2Q8TAQ2 1214 aa5.64□□□□□ -1.51
CDH1-211ENST00000567320 BTG4Q9NY30 223 aa5.64□□□□□ -1.51
CDH1-211ENST00000567320 AKT3Q9Y243 479 aa5.64□□□□□ -1.51
CDH1-211ENST00000567320 TRBV23OR9-2A0A075B6M9 112 aa5.63□□□□□ -1.51
CDH1-211ENST00000567320 PRICKLE3O43900 615 aaPredicted RBP5.63□□□□□ -1.51
CDH1-211ENST00000567320 NPHS1O60500 1241 aa5.63□□□□□ -1.51
CDH1-211ENST00000567320 NASPP49321 788 aaPredicted RBP5.63□□□□□ -1.51
CDH1-211ENST00000567320 CAP1Q01518 475 aa5.63□□□□□ -1.51
CDH1-211ENST00000567320 SLC9A5Q14940 896 aa5.63□□□□□ -1.51
CDH1-211ENST00000567320 VWA3BQ502W6 1294 aa5.63□□□□□ -1.51
CDH1-211ENST00000567320 VHLLQ6RSH7 139 aa5.63□□□□□ -1.51
CDH1-211ENST00000567320 B3GNT8Q7Z7M8 397 aa5.63□□□□□ -1.51
CDH1-211ENST00000567320 SAPCD2Q86UD0 394 aa5.63□□□□□ -1.51
CDH1-211ENST00000567320 C19orf47Q8N9M1 422 aaKnown RBP5.63□□□□□ -1.51
CDH1-211ENST00000567320 DDX1Q92499 740 aaKnown RBP5.63□□□□□ -1.51
CDH1-211ENST00000567320 TSPAN17Q96FV3 270 aa5.63□□□□□ -1.51
CDH1-211ENST00000567320 CLEC1BQ9P126 229 aa5.63□□□□□ -1.51
CDH1-211ENST00000567320 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.63□□□□□ -1.51
CDH1-211ENST00000567320 KCNH1O95259 989 aa5.62□□□□□ -1.51
CDH1-211ENST00000567320 ZBTB7AO95365 584 aa5.62□□□□□ -1.51
CDH1-211ENST00000567320 RECKO95980 971 aa5.62□□□□□ -1.51
CDH1-211ENST00000567320 NTRK1P04629 796 aa5.62□□□□□ -1.51
CDH1-211ENST00000567320 GJA9P57773 515 aa5.62□□□□□ -1.51
CDH1-211ENST00000567320 TRIM26Q12899 539 aaPredicted RBP5.62□□□□□ -1.51
CDH1-211ENST00000567320 GRB10Q13322 594 aa5.62□□□□□ -1.51
CDH1-211ENST00000567320 WWC2Q6AWC2 1192 aa5.62□□□□□ -1.51
CDH1-211ENST00000567320 TTLL7Q6ZT98 887 aa5.62□□□□□ -1.51
CDH1-211ENST00000567320 NT5DC4Q86YG4 428 aa5.62□□□□□ -1.51
CDH1-211ENST00000567320 ARHGEF39Q8N4T4 335 aa5.62□□□□□ -1.51
CDH1-211ENST00000567320 NETO2Q8NC67 525 aa5.62□□□□□ -1.51
CDH1-211ENST00000567320 KLHL6Q8WZ60 621 aa5.62□□□□□ -1.51
CDH1-211ENST00000567320 ZBTB8AQ96BR9 441 aa5.62□□□□□ -1.51
CDH1-211ENST00000567320 FBLN5Q9UBX5 448 aa5.62□□□□□ -1.51
CDH1-211ENST00000567320 SIT1Q9Y3P8 196 aa5.62□□□□□ -1.51
CDH1-211ENST00000567320 C7orf72A4D263 438 aa5.61□□□□□ -1.51
CDH1-211ENST00000567320 ANKRD34BA5PLL1 514 aa5.61□□□□□ -1.51
CDH1-211ENST00000567320 K7ESM1 405 aa5.61□□□□□ -1.51
CDH1-211ENST00000567320 NOP56O00567 594 aaKnown RBP5.61□□□□□ -1.51
CDH1-211ENST00000567320 SMARCA5O60264 1052 aaPredicted RBP5.61□□□□□ -1.51
CDH1-211ENST00000567320 PPP1R11O60927 126 aaPredicted RBP5.61□□□□□ -1.51
CDH1-211ENST00000567320 ADRB1P08588 477 aa5.61□□□□□ -1.51
CDH1-211ENST00000567320 SMAD4Q13485 552 aaKnown RBP5.61□□□□□ -1.51
CDH1-211ENST00000567320 SPATS1Q496A3 300 aa5.61□□□□□ -1.51
CDH1-211ENST00000567320 POMZP3Q6PJE2 187 aa5.61□□□□□ -1.51
CDH1-211ENST00000567320 CARFQ8N187 725 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms