RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 ARID4AP29374 1257 aaPredicted RBP11.74□□□□□ -0.53
CAPN3-216ENST00000567071 LTBRP36941 435 aa11.74□□□□□ -0.53
CAPN3-216ENST00000567071 ICA1Q05084 483 aa11.74□□□□□ -0.53
CAPN3-216ENST00000567071 ACAP1Q15027 740 aa11.74□□□□□ -0.53
CAPN3-216ENST00000567071 EPC2Q52LR7 807 aa11.74□□□□□ -0.53
CAPN3-216ENST00000567071 KIAA1755Q5JYT7 1200 aa11.74□□□□□ -0.53
CAPN3-216ENST00000567071 ZBTB33Q86T24 672 aa11.74□□□□□ -0.53
CAPN3-216ENST00000567071 KCNG4Q8TDN1 519 aa11.74□□□□□ -0.53
CAPN3-216ENST00000567071 ASIC4Q96FT7 647 aa11.74□□□□□ -0.53
CAPN3-216ENST00000567071 FBXO28Q9NVF7 368 aa11.74□□□□□ -0.53
CAPN3-216ENST00000567071 FBXO40Q9UH90 709 aa11.74□□□□□ -0.53
CAPN3-216ENST00000567071 GNEQ9Y223 722 aaKnown RBP11.74□□□□□ -0.53
CAPN3-216ENST00000567071 SSUH2Q9Y2M2 353 aa11.74□□□□□ -0.53
CAPN3-216ENST00000567071 TMX2Q9Y320 296 aa11.74□□□□□ -0.53
CAPN3-216ENST00000567071 Q9Y3F1 56 aa11.74□□□□□ -0.53
CAPN3-216ENST00000567071 ASB14A6NK59 587 aa11.73□□□□□ -0.53
CAPN3-216ENST00000567071 RAD21O60216 631 aa11.73□□□□□ -0.53
CAPN3-216ENST00000567071 IKBKEQ14164 716 aa11.73□□□□□ -0.53
CAPN3-216ENST00000567071 CTC1Q2NKJ3 1217 aa11.73□□□□□ -0.53
CAPN3-216ENST00000567071 BRDTQ58F21 947 aaPredicted RBP11.73□□□□□ -0.53
CAPN3-216ENST00000567071 WDR63Q8IWG1 891 aa11.73□□□□□ -0.53
CAPN3-216ENST00000567071 CAGE1Q8TC20 777 aa11.73□□□□□ -0.53
CAPN3-216ENST00000567071 AFAP1L1Q8TED9 768 aa11.73□□□□□ -0.53
CAPN3-216ENST00000567071 USP24Q9UPU5 2620 aa11.73□□□□□ -0.53
CAPN3-216ENST00000567071 PA2G4Q9UQ80 394 aaKnown RBP11.73□□□□□ -0.53
CAPN3-216ENST00000567071 HDAC5Q9UQL6 1122 aa11.73□□□□□ -0.53
CAPN3-216ENST00000567071 DNAH14Q0VDD8 3507 aa11.73□□□□□ -0.53
CAPN3-216ENST00000567071 MYH8P13535 1937 aa11.72□□□□□ -0.53
CAPN3-216ENST00000567071 LOC730098B7Z3J9 87 aa11.72□□□□□ -0.53
CAPN3-216ENST00000567071 UBTFL1P0CB47 393 aaPredicted RBP11.72□□□□□ -0.53
CAPN3-216ENST00000567071 NDUFV1P49821 464 aa11.72□□□□□ -0.53
CAPN3-216ENST00000567071 DYNLL1P63167 89 aaKnown RBP11.72□□□□□ -0.53
CAPN3-216ENST00000567071 SLFN5Q08AF3 891 aa11.72□□□□□ -0.53
CAPN3-216ENST00000567071 IQSEC1Q6DN90 963 aa11.72□□□□□ -0.53
CAPN3-216ENST00000567071 ADGRA1Q86SQ6 560 aa11.72□□□□□ -0.53
CAPN3-216ENST00000567071 PPP2R3CQ969Q6 453 aa11.72□□□□□ -0.53
CAPN3-216ENST00000567071 RIPOR3Q96MK2 946 aa11.72□□□□□ -0.53
CAPN3-216ENST00000567071 MTG1Q9BT17 334 aaPredicted RBP11.72□□□□□ -0.53
CAPN3-216ENST00000567071 GOPCQ9HD26 462 aa11.72□□□□□ -0.53
CAPN3-216ENST00000567071 E9PSI1 815 aa11.71□□□□□ -0.53
CAPN3-216ENST00000567071 MYL3P08590 195 aa11.71□□□□□ -0.53
CAPN3-216ENST00000567071 SMPD1P17405 629 aa11.71□□□□□ -0.53
CAPN3-216ENST00000567071 CYP7A1P22680 504 aa11.71□□□□□ -0.53
CAPN3-216ENST00000567071 CPT1AP50416 773 aa11.71□□□□□ -0.53
CAPN3-216ENST00000567071 PTPN11Q06124 597 aaPredicted RBP11.71□□□□□ -0.53
CAPN3-216ENST00000567071 TFCP2Q12800 502 aa11.71□□□□□ -0.53
CAPN3-216ENST00000567071 CBX2Q14781 532 aaPredicted RBP11.71□□□□□ -0.53
CAPN3-216ENST00000567071 NFRKBQ6P4R8 1299 aa11.71□□□□□ -0.53
CAPN3-216ENST00000567071 KIAA2013Q8IYS2 634 aa11.71□□□□□ -0.53
CAPN3-216ENST00000567071 REPS2Q8NFH8 660 aa11.71□□□□□ -0.53
CAPN3-216ENST00000567071 HINFPQ9BQA5 517 aa11.71□□□□□ -0.53
CAPN3-216ENST00000567071 KATNBL1Q9H079 304 aa11.71□□□□□ -0.53
CAPN3-216ENST00000567071 COPRSQ9NQ92 184 aa11.71□□□□□ -0.53
CAPN3-216ENST00000567071 NLRC5Q86WI3 1866 aa11.71□□□□□ -0.53
CAPN3-216ENST00000567071 RAD50Q92878 1312 aa11.7□□□□□ -0.54
CAPN3-216ENST00000567071 ZBED4O75132 1171 aa11.7□□□□□ -0.54
CAPN3-216ENST00000567071 AMHP03971 560 aa11.7□□□□□ -0.54
CAPN3-216ENST00000567071 SELPP16109 830 aa11.7□□□□□ -0.54
CAPN3-216ENST00000567071 ICAM3P32942 547 aa11.7□□□□□ -0.54
CAPN3-216ENST00000567071 PLCD1P51178 756 aa11.7□□□□□ -0.54
CAPN3-216ENST00000567071 PURAQ00577 322 aaKnown RBP11.7□□□□□ -0.54
CAPN3-216ENST00000567071 DLX2Q07687 328 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-216ENST00000567071 HYAL1Q12794 435 aa11.7□□□□□ -0.54
CAPN3-216ENST00000567071 PTPN21Q16825 1174 aa11.7□□□□□ -0.54
CAPN3-216ENST00000567071 LRRC8DQ7L1W4 858 aa11.7□□□□□ -0.54
CAPN3-216ENST00000567071 CPXCR1Q8N123 301 aa11.7□□□□□ -0.54
CAPN3-216ENST00000567071 CHST13Q8NET6 341 aa11.7□□□□□ -0.54
CAPN3-216ENST00000567071 YME1L1Q96TA2 773 aa11.7□□□□□ -0.54
CAPN3-216ENST00000567071 SLF1Q9BQI6 1058 aa11.7□□□□□ -0.54
CAPN3-216ENST00000567071 LMAN2LQ9H0V9 348 aa11.7□□□□□ -0.54
CAPN3-216ENST00000567071 IGFLR1Q9H665 355 aa11.7□□□□□ -0.54
CAPN3-216ENST00000567071 MICAL3Q7RTP6 2002 aa11.7□□□□□ -0.54
CAPN3-216ENST00000567071 SCN10AQ9Y5Y9 1956 aa11.69□□□□□ -0.54
CAPN3-216ENST00000567071 USP17L12C9JPN9 530 aa11.69□□□□□ -0.54
CAPN3-216ENST00000567071 USP17L21D6R901 530 aa11.69□□□□□ -0.54
CAPN3-216ENST00000567071 TBX10O75333 385 aa11.69□□□□□ -0.54
CAPN3-216ENST00000567071 EYA4O95677 639 aa11.69□□□□□ -0.54
CAPN3-216ENST00000567071 TTC39AQ5SRH9 613 aa11.69□□□□□ -0.54
CAPN3-216ENST00000567071 FAM83BQ5T0W9 1011 aa11.69□□□□□ -0.54
CAPN3-216ENST00000567071 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.69□□□□□ -0.54
CAPN3-216ENST00000567071 FBXO11Q86XK2 927 aa11.69□□□□□ -0.54
CAPN3-216ENST00000567071 TMEM192Q8IY95 271 aa11.69□□□□□ -0.54
CAPN3-216ENST00000567071 MYOCDQ8IZQ8 938 aa11.69□□□□□ -0.54
CAPN3-216ENST00000567071 MIGA1Q8NAN2 632 aa11.69□□□□□ -0.54
CAPN3-216ENST00000567071 SP7Q8TDD2 431 aaPredicted RBP11.69□□□□□ -0.54
CAPN3-216ENST00000567071 CHAMP1Q96JM3 812 aa11.69□□□□□ -0.54
CAPN3-216ENST00000567071 RPGRIP1Q96KN7 1286 aa11.69□□□□□ -0.54
CAPN3-216ENST00000567071 FGD4Q96M96 766 aa11.69□□□□□ -0.54
CAPN3-216ENST00000567071 PHF7Q9BWX1 381 aaPredicted RBP11.69□□□□□ -0.54
CAPN3-216ENST00000567071 SEMA4AQ9H3S1 761 aa11.69□□□□□ -0.54
CAPN3-216ENST00000567071 SNRKQ9NRH2 765 aa11.69□□□□□ -0.54
CAPN3-216ENST00000567071 RALGAPA2Q2PPJ7 1873 aa11.69□□□□□ -0.54
CAPN3-216ENST00000567071 NAV1Q8NEY1 1877 aa11.68□□□□□ -0.54
CAPN3-216ENST00000567071 PTPRCP08575 1304 aa11.68□□□□□ -0.54
CAPN3-216ENST00000567071 ATP2A1O14983 1001 aa11.68□□□□□ -0.54
CAPN3-216ENST00000567071 KPNA6O60684 536 aa11.68□□□□□ -0.54
CAPN3-216ENST00000567071 LMNAP02545 664 aaKnown RBP11.68□□□□□ -0.54
CAPN3-216ENST00000567071 SDHBP21912 280 aa11.68□□□□□ -0.54
CAPN3-216ENST00000567071 GABPAQ06546 454 aa11.68□□□□□ -0.54
CAPN3-216ENST00000567071 KIAA1211Q6ZU35 1233 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms