RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 ZNF236Q9UL36 1845 aa19.31■□□□□ 0.68
CLN6-208ENST00000567060 COL6A1P12109 1028 aa19.31■□□□□ 0.68
CLN6-208ENST00000567060 ADD1P35611 737 aaKnown RBP19.31■□□□□ 0.68
CLN6-208ENST00000567060 AKAP17AQ02040 695 aaKnown RBP19.31■□□□□ 0.68
CLN6-208ENST00000567060 NTRK3Q16288 839 aa19.31■□□□□ 0.68
CLN6-208ENST00000567060 CCDC174Q6PII3 467 aa19.31■□□□□ 0.68
CLN6-208ENST00000567060 GPR142Q7Z601 462 aa19.31■□□□□ 0.68
CLN6-208ENST00000567060 NCAPG2Q86XI2 1143 aa19.31■□□□□ 0.68
CLN6-208ENST00000567060 TRIM22Q8IYM9 498 aa19.31■□□□□ 0.68
CLN6-208ENST00000567060 RGS22Q8NE09 1264 aa19.31■□□□□ 0.68
CLN6-208ENST00000567060 GTF3C6Q969F1 213 aa19.31■□□□□ 0.68
CLN6-208ENST00000567060 PORCNQ9H237 461 aa19.31■□□□□ 0.68
CLN6-208ENST00000567060 ACAD9Q9H845 621 aa19.31■□□□□ 0.68
CLN6-208ENST00000567060 VAT1LQ9HCJ6 419 aa19.31■□□□□ 0.68
CLN6-208ENST00000567060 MAP3K20Q9NYL2 800 aaKnown RBP19.31■□□□□ 0.68
CLN6-208ENST00000567060 MRPL11Q9Y3B7 192 aaKnown RBP19.31■□□□□ 0.68
CLN6-208ENST00000567060 BAZ2BQ9UIF8 2168 aaKnown RBP19.3■□□□□ 0.68
CLN6-208ENST00000567060 SLC15A5A6NIM6 579 aa19.3■□□□□ 0.68
CLN6-208ENST00000567060 PRPF3O43395 683 aaKnown RBP19.3■□□□□ 0.68
CLN6-208ENST00000567060 FCER1AP12319 257 aa19.3■□□□□ 0.68
CLN6-208ENST00000567060 SCRN1Q12765 414 aa19.3■□□□□ 0.68
CLN6-208ENST00000567060 ME3Q16798 604 aa19.3■□□□□ 0.68
CLN6-208ENST00000567060 SLC35G1Q2M3R5 365 aa19.3■□□□□ 0.68
CLN6-208ENST00000567060 RAB11FIP4Q86YS3 637 aa19.3■□□□□ 0.68
CLN6-208ENST00000567060 PIGSQ96S52 555 aa19.3■□□□□ 0.68
CLN6-208ENST00000567060 CPVLQ9H3G5 476 aa19.3■□□□□ 0.68
CLN6-208ENST00000567060 SLC5A4Q9NY91 659 aa19.3■□□□□ 0.68
CLN6-208ENST00000567060 XRCC5P13010 732 aaKnown RBP19.29■□□□□ 0.68
CLN6-208ENST00000567060 PRKAR2AP13861 404 aaKnown RBP19.29■□□□□ 0.68
CLN6-208ENST00000567060 PTPREP23469 700 aa19.29■□□□□ 0.68
CLN6-208ENST00000567060 CCT2P78371 535 aaKnown RBP19.29■□□□□ 0.68
CLN6-208ENST00000567060 GRB14Q14449 540 aa19.29■□□□□ 0.68
CLN6-208ENST00000567060 KCTD2Q14681 263 aa19.29■□□□□ 0.68
CLN6-208ENST00000567060 LHX8Q68G74 356 aa19.29■□□□□ 0.68
CLN6-208ENST00000567060 HOMER1Q86YM7 354 aa19.29■□□□□ 0.68
CLN6-208ENST00000567060 MCF2L2Q86YR7 1114 aa19.29■□□□□ 0.68
CLN6-208ENST00000567060 USP6NLQ92738 828 aa19.29■□□□□ 0.68
CLN6-208ENST00000567060 AGBL1Q96MI9 1066 aa19.29■□□□□ 0.68
CLN6-208ENST00000567060 TRERF1Q96PN7 1200 aa19.29■□□□□ 0.68
CLN6-208ENST00000567060 NUDT12Q9BQG2 462 aa19.29■□□□□ 0.68
CLN6-208ENST00000567060 LLPHQ9BRT6 129 aaKnown RBP19.29■□□□□ 0.68
CLN6-208ENST00000567060 UBE2OQ9C0C9 1292 aaKnown RBP19.29■□□□□ 0.68
CLN6-208ENST00000567060 RNF146Q9NTX7 359 aa19.29■□□□□ 0.68
CLN6-208ENST00000567060 STK36Q9NRP7 1315 aa19.28■□□□□ 0.68
CLN6-208ENST00000567060 ALAS1P13196 640 aa19.28■□□□□ 0.68
CLN6-208ENST00000567060 CACNB2Q08289 660 aaPredicted RBP19.28■□□□□ 0.68
CLN6-208ENST00000567060 PPP1R18Q6NYC8 613 aa19.28■□□□□ 0.68
CLN6-208ENST00000567060 GLT8D2Q9H1C3 349 aa19.28■□□□□ 0.68
CLN6-208ENST00000567060 RIPK3Q9Y572 518 aa19.28■□□□□ 0.68
CLN6-208ENST00000567060 PCDHA1Q9Y5I3 950 aa19.28■□□□□ 0.68
CLN6-208ENST00000567060 SPTBN5Q9NRC6 3674 aaKnown RBP19.27■□□□□ 0.68
CLN6-208ENST00000567060 DEXIO95424 95 aa19.27■□□□□ 0.68
CLN6-208ENST00000567060 HOXC6P09630 235 aa19.27■□□□□ 0.68
CLN6-208ENST00000567060 GHRHRQ02643 423 aa19.27■□□□□ 0.68
CLN6-208ENST00000567060 SSRP1Q08945 709 aaKnown RBP19.27■□□□□ 0.68
CLN6-208ENST00000567060 STK3Q13188 491 aa19.27■□□□□ 0.68
CLN6-208ENST00000567060 PFKFB3Q16875 520 aaPredicted RBP19.27■□□□□ 0.68
CLN6-208ENST00000567060 MORN1Q5T089 497 aa19.27■□□□□ 0.68
CLN6-208ENST00000567060 WDR78Q5VTH9 848 aa19.27■□□□□ 0.68
CLN6-208ENST00000567060 TRMT44Q8IYL2 757 aaKnown RBP19.27■□□□□ 0.68
CLN6-208ENST00000567060 CCDC12Q8WUD4 166 aaPredicted RBP19.27■□□□□ 0.68
CLN6-208ENST00000567060 WASF1Q92558 559 aa19.27■□□□□ 0.68
CLN6-208ENST00000567060 SNX21Q969T3 373 aa19.27■□□□□ 0.68
CLN6-208ENST00000567060 MMP19Q99542 508 aa19.27■□□□□ 0.68
CLN6-208ENST00000567060 NCOA5Q9HCD5 579 aaKnown RBP19.27■□□□□ 0.68
CLN6-208ENST00000567060 DIS3Q9Y2L1 958 aaKnown RBP19.27■□□□□ 0.68
CLN6-208ENST00000567060 V9GY48 417 aaPredicted RBP19.27■□□□□ 0.68
CLN6-208ENST00000567060 LOC102724159A0A0B4J2E5 919 aa19.26■□□□□ 0.67
CLN6-208ENST00000567060 CCND3P30281 292 aaPredicted RBP19.26■□□□□ 0.67
CLN6-208ENST00000567060 RGS2P41220 211 aa19.26■□□□□ 0.67
CLN6-208ENST00000567060 SNAP25P60880 206 aa19.26■□□□□ 0.67
CLN6-208ENST00000567060 PWP2Q15269 919 aaKnown RBP19.26■□□□□ 0.67
CLN6-208ENST00000567060 CCL14Q16627 93 aa19.26■□□□□ 0.67
CLN6-208ENST00000567060 LRRC26Q2I0M4 334 aa19.26■□□□□ 0.67
CLN6-208ENST00000567060 CMTR1Q8N1G2 835 aaKnown RBP19.26■□□□□ 0.67
CLN6-208ENST00000567060 CCDC82Q8N4S0 544 aa19.26■□□□□ 0.67
CLN6-208ENST00000567060 LARP6Q9BRS8 491 aaKnown RBP19.26■□□□□ 0.67
CLN6-208ENST00000567060 PRUNE2Q8WUY3 3088 aa19.26■□□□□ 0.67
CLN6-208ENST00000567060 SCG2P13521 617 aa19.25■□□□□ 0.67
CLN6-208ENST00000567060 HMGN5P82970 282 aaKnown RBP19.25■□□□□ 0.67
CLN6-208ENST00000567060 MAP2K5Q13163 448 aa19.25■□□□□ 0.67
CLN6-208ENST00000567060 USH1GQ495M9 461 aa19.25■□□□□ 0.67
CLN6-208ENST00000567060 NOL8Q76FK4 1167 aaKnown RBP19.25■□□□□ 0.67
CLN6-208ENST00000567060 ANKRD35Q8N283 1001 aa19.25■□□□□ 0.67
CLN6-208ENST00000567060 CLEC4DQ8WXI8 215 aa19.25■□□□□ 0.67
CLN6-208ENST00000567060 COL25A1Q9BXS0 654 aaPredicted RBP19.25■□□□□ 0.67
CLN6-208ENST00000567060 SH3GLB2Q9NR46 395 aa19.25■□□□□ 0.67
CLN6-208ENST00000567060 POTEB2H3BUK9 544 aa19.24■□□□□ 0.67
CLN6-208ENST00000567060 PPP1R11O60927 126 aaPredicted RBP19.24■□□□□ 0.67
CLN6-208ENST00000567060 ADORA2AP29274 412 aa19.24■□□□□ 0.67
CLN6-208ENST00000567060 MDM2Q00987 491 aaPredicted RBP19.24■□□□□ 0.67
CLN6-208ENST00000567060 MSL3Q8N5Y2 521 aaKnown RBP19.24■□□□□ 0.67
CLN6-208ENST00000567060 CCDC148Q8NFR7 591 aa19.24■□□□□ 0.67
CLN6-208ENST00000567060 DDX11Q96FC9 970 aa19.24■□□□□ 0.67
CLN6-208ENST00000567060 TMX3Q96JJ7 454 aa19.24■□□□□ 0.67
CLN6-208ENST00000567060 APBA2Q99767 749 aa19.24■□□□□ 0.67
CLN6-208ENST00000567060 SLC26A6Q9BXS9 759 aa19.24■□□□□ 0.67
CLN6-208ENST00000567060 BARHL2Q9NY43 387 aa19.24■□□□□ 0.67
CLN6-208ENST00000567060 SMCHD1A6NHR9 2005 aa19.24■□□□□ 0.67
CLN6-208ENST00000567060 ZNFX1Q9P2E3 1918 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms