RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 MAGEB6P1A0A0J9YX57 407 aa17.45■□□□□ 0.38
COMMD4-215ENST00000566843 BCAMP50895 628 aa17.45■□□□□ 0.38
COMMD4-215ENST00000566843 GLE1Q53GS7 698 aaKnown RBP17.45■□□□□ 0.38
COMMD4-215ENST00000566843 P2RX5Q93086 422 aa17.45■□□□□ 0.38
COMMD4-215ENST00000566843 CNOT6LQ96LI5 555 aaKnown RBP17.45■□□□□ 0.38
COMMD4-215ENST00000566843 TMOD3Q9NYL9 352 aa17.45■□□□□ 0.38
COMMD4-215ENST00000566843 PLAGL2Q9UPG8 496 aa17.45■□□□□ 0.38
COMMD4-215ENST00000566843 BICDL2A1A5D9 508 aa17.44■□□□□ 0.38
COMMD4-215ENST00000566843 CALML3P27482 149 aa17.44■□□□□ 0.38
COMMD4-215ENST00000566843 APBA1Q02410 837 aa17.44■□□□□ 0.38
COMMD4-215ENST00000566843 CCDC96Q2M329 555 aa17.44■□□□□ 0.38
COMMD4-215ENST00000566843 SMCR8Q8TEV9 937 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-215ENST00000566843 RIOK1Q9BRS2 568 aaKnown RBP17.44■□□□□ 0.38
COMMD4-215ENST00000566843 BRIP1Q9BX63 1249 aa17.44■□□□□ 0.38
COMMD4-215ENST00000566843 FSBPO95073 299 aa17.44■□□□□ 0.38
COMMD4-215ENST00000566843 FBXW10Q5XX13 1052 aa17.44■□□□□ 0.38
COMMD4-215ENST00000566843 KRT26Q7Z3Y9 468 aa17.44■□□□□ 0.38
COMMD4-215ENST00000566843 CCDC155Q8N6L0 562 aa17.44■□□□□ 0.38
COMMD4-215ENST00000566843 WNK3Q9BYP7 1800 aa17.44■□□□□ 0.38
COMMD4-215ENST00000566843 MLXIPQ9HAP2 919 aa17.44■□□□□ 0.38
COMMD4-215ENST00000566843 PJA2O43164 708 aa17.43■□□□□ 0.38
COMMD4-215ENST00000566843 PPP1R2P41236 205 aa17.43■□□□□ 0.38
COMMD4-215ENST00000566843 KDM7AQ6ZMT4 941 aa17.43■□□□□ 0.38
COMMD4-215ENST00000566843 MARCH10Q8NA82 808 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-215ENST00000566843 RUFY1Q96T51 708 aa17.43■□□□□ 0.38
COMMD4-215ENST00000566843 IFIH1Q9BYX4 1025 aaKnown RBP17.43■□□□□ 0.38
COMMD4-215ENST00000566843 ARHGAP20Q9P2F6 1191 aa17.43■□□□□ 0.38
COMMD4-215ENST00000566843 MOCS3O95396 460 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 BRD2P25440 801 aaKnown RBP17.42■□□□□ 0.38
COMMD4-215ENST00000566843 SLC7A5Q01650 507 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 ANKRD40Q6AI12 368 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 DTHD1Q6ZMT9 781 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 CD302Q8IX05 232 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 BLIDQ8IZY5 108 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 IQCKQ8N0W5 287 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 C1orf131Q8NDD1 294 aaKnown RBP17.42■□□□□ 0.38
COMMD4-215ENST00000566843 PIGBQ92521 554 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 ZIM3Q96PE6 472 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 HINFPQ9BQA5 517 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 NOC4LQ9BVI4 516 aaKnown RBP17.42■□□□□ 0.38
COMMD4-215ENST00000566843 CUEDC2Q9H467 287 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 MAGEF1Q9HAY2 307 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 ASAP1Q9ULH1 1129 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.42■□□□□ 0.38
COMMD4-215ENST00000566843 SAMM50Q9Y512 469 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 ERVV-1B6SEH8 477 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 NDUFAB1O14561 156 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 PLEKP08567 350 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-215ENST00000566843 VEGFAP15692 232 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-215ENST00000566843 PDCLQ13371 301 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 COBLL1Q53SF7 1204 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 NFRKBQ6P4R8 1299 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 YTHDF3Q7Z739 585 aaKnown RBP17.42■□□□□ 0.38
COMMD4-215ENST00000566843 ZNF34Q8IZ26 560 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 ALS2CR12Q96Q35 445 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 GDF3Q9NR23 364 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 SH3GLB2Q9NR46 395 aa17.42■□□□□ 0.38
COMMD4-215ENST00000566843 CICQ96RK0 1608 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-215ENST00000566843 FAM205AQ6ZU69 1335 aa17.41■□□□□ 0.38
COMMD4-215ENST00000566843 LOC102724159A0A0B4J2E5 919 aa17.41■□□□□ 0.38
COMMD4-215ENST00000566843 MEFVO15553 781 aaPredicted RBP17.41■□□□□ 0.38
COMMD4-215ENST00000566843 MTIF2P46199 727 aaKnown RBP17.41■□□□□ 0.38
COMMD4-215ENST00000566843 KIF11P52732 1056 aa17.41■□□□□ 0.38
COMMD4-215ENST00000566843 PWP2Q15269 919 aaKnown RBP17.41■□□□□ 0.38
COMMD4-215ENST00000566843 FKBP15Q5T1M5 1219 aa17.41■□□□□ 0.38
COMMD4-215ENST00000566843 TTC19Q6DKK2 380 aaPredicted RBP17.41■□□□□ 0.38
COMMD4-215ENST00000566843 MREGQ8N565 214 aa17.41■□□□□ 0.38
COMMD4-215ENST00000566843 LRRC15Q8TF66 581 aa17.41■□□□□ 0.38
COMMD4-215ENST00000566843 ACSBG1Q96GR2 724 aa17.41■□□□□ 0.38
COMMD4-215ENST00000566843 PCMTD1Q96MG8 357 aaPredicted RBP17.41■□□□□ 0.38
COMMD4-215ENST00000566843 RABEP2Q9H5N1 569 aa17.41■□□□□ 0.38
COMMD4-215ENST00000566843 A1CFQ9NQ94 594 aaKnown RBP17.41■□□□□ 0.38
COMMD4-215ENST00000566843 CACNA1SQ13698 1873 aa17.41■□□□□ 0.38
COMMD4-215ENST00000566843 CYP2D7A0A087X1C5 515 aa17.41■□□□□ 0.38
COMMD4-215ENST00000566843 M0R2N6 131 aa17.41■□□□□ 0.38
COMMD4-215ENST00000566843 ORC4O43929 436 aa17.41■□□□□ 0.38
COMMD4-215ENST00000566843 PAFAH1B1P43034 410 aa17.41■□□□□ 0.38
COMMD4-215ENST00000566843 PCDHA4Q9UN74 947 aa17.41■□□□□ 0.38
COMMD4-215ENST00000566843 SIK3Q9Y2K2 1263 aa17.41■□□□□ 0.38
COMMD4-215ENST00000566843 BAZ2AQ9UIF9 1905 aaKnown RBP17.41■□□□□ 0.38
COMMD4-215ENST00000566843 MYH10P35580 1976 aa17.4■□□□□ 0.38
COMMD4-215ENST00000566843 SRRM3A6NNA2 597 aaPredicted RBP17.4■□□□□ 0.38
COMMD4-215ENST00000566843 PP2D1A8MPX8 630 aa17.4■□□□□ 0.38
COMMD4-215ENST00000566843 DDR1Q08345 913 aa17.4■□□□□ 0.38
COMMD4-215ENST00000566843 CCDC181Q5TID7 509 aa17.4■□□□□ 0.38
COMMD4-215ENST00000566843 C8orf74Q6P047 294 aa17.4■□□□□ 0.38
COMMD4-215ENST00000566843 EPN3Q9H201 632 aa17.4■□□□□ 0.38
COMMD4-215ENST00000566843 RNF14Q9UBS8 474 aa17.4■□□□□ 0.38
COMMD4-215ENST00000566843 CAPN7Q9Y6W3 813 aa17.4■□□□□ 0.38
COMMD4-215ENST00000566843 EIF4A3P38919 411 aaKnown RBP17.4■□□□□ 0.38
COMMD4-215ENST00000566843 UBA7P41226 1012 aa17.4■□□□□ 0.38
COMMD4-215ENST00000566843 MNAT1P51948 309 aa17.4■□□□□ 0.38
COMMD4-215ENST00000566843 TYW1BQ6NUM6 668 aa17.4■□□□□ 0.38
COMMD4-215ENST00000566843 IFT20Q8IY31 132 aa17.4■□□□□ 0.38
COMMD4-215ENST00000566843 CCDC47Q96A33 483 aaKnown RBP17.4■□□□□ 0.38
COMMD4-215ENST00000566843 C7orf25Q9BPX7 421 aa17.4■□□□□ 0.38
COMMD4-215ENST00000566843 TLR10Q9BXR5 811 aa17.4■□□□□ 0.38
COMMD4-215ENST00000566843 TMEM60Q9H2L4 133 aa17.4■□□□□ 0.38
COMMD4-215ENST00000566843 RBM12Q9NTZ6 932 aaKnown RBP17.4■□□□□ 0.38
COMMD4-215ENST00000566843 GGA2Q9UJY4 613 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms