RNA–Protein interactions for RNA: ENST00000566827.5

CDH11-212, Transcript of cadherin 11, humanhuman

TSL 2 BASIC

Gene CDH11, Length 2,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-212ENST00000566827 SNHG28P0DPA3 235 aa12.69□□□□□ -0.38
CDH11-212ENST00000566827 ERCC5P28715 1186 aaPredicted RBP12.69□□□□□ -0.38
CDH11-212ENST00000566827 NFXL1Q6ZNB6 911 aa12.69□□□□□ -0.38
CDH11-212ENST00000566827 DGKHQ86XP1 1220 aa12.69□□□□□ -0.38
CDH11-212ENST00000566827 NME8Q8N427 588 aa12.69□□□□□ -0.38
CDH11-212ENST00000566827 BRF1Q92994 677 aa12.69□□□□□ -0.38
CDH11-212ENST00000566827 MCM5P33992 734 aa12.68□□□□□ -0.38
CDH11-212ENST00000566827 MNX1P50219 401 aaPredicted RBP12.68□□□□□ -0.38
CDH11-212ENST00000566827 KIF22Q14807 665 aa12.68□□□□□ -0.38
CDH11-212ENST00000566827 KLRF2D3W0D1 207 aa12.67□□□□□ -0.38
CDH11-212ENST00000566827 ADAMTS3O15072 1205 aa12.67□□□□□ -0.38
CDH11-212ENST00000566827 ADCY3O60266 1144 aa12.67□□□□□ -0.38
CDH11-212ENST00000566827 EXOSC10Q01780 885 aaKnown RBP12.67□□□□□ -0.38
CDH11-212ENST00000566827 STK3Q13188 491 aa12.67□□□□□ -0.38
CDH11-212ENST00000566827 Q6ZUG5 572 aa12.67□□□□□ -0.38
CDH11-212ENST00000566827 NOP9Q86U38 636 aaKnown RBP12.67□□□□□ -0.38
CDH11-212ENST00000566827 ZNF654Q8IZM8 581 aa12.67□□□□□ -0.38
CDH11-212ENST00000566827 PMM1Q92871 262 aa12.67□□□□□ -0.38
CDH11-212ENST00000566827 LCTP09848 1927 aa12.67□□□□□ -0.38
CDH11-212ENST00000566827 TLDC2A0PJX2 215 aa12.67□□□□□ -0.38
CDH11-212ENST00000566827 PPFIA4O75335 1185 aa12.67□□□□□ -0.38
CDH11-212ENST00000566827 REC8O95072 547 aa12.67□□□□□ -0.38
CDH11-212ENST00000566827 VAMP1P23763 118 aa12.67□□□□□ -0.38
CDH11-212ENST00000566827 CDC27P30260 824 aa12.67□□□□□ -0.38
CDH11-212ENST00000566827 MCCD1P59942 119 aaPredicted RBP12.67□□□□□ -0.38
CDH11-212ENST00000566827 CCT2P78371 535 aaKnown RBP12.67□□□□□ -0.38
CDH11-212ENST00000566827 SYDE2Q5VT97 1194 aa12.67□□□□□ -0.38
CDH11-212ENST00000566827 FBXO46Q6PJ61 603 aaPredicted RBP12.67□□□□□ -0.38
CDH11-212ENST00000566827 PIGSQ96S52 555 aa12.67□□□□□ -0.38
CDH11-212ENST00000566827 JMJD4Q9H9V9 463 aa12.67□□□□□ -0.38
CDH11-212ENST00000566827 GRXCR2A6NFK2 248 aa12.66□□□□□ -0.38
CDH11-212ENST00000566827 ZKSCAN1P17029 563 aaPredicted RBP12.66□□□□□ -0.38
CDH11-212ENST00000566827 EN2P19622 333 aaPredicted RBP12.66□□□□□ -0.38
CDH11-212ENST00000566827 ADD1P35611 737 aaKnown RBP12.66□□□□□ -0.38
CDH11-212ENST00000566827 PDAP1Q13442 181 aaKnown RBP12.66□□□□□ -0.38
CDH11-212ENST00000566827 HIC1Q14526 733 aa12.66□□□□□ -0.38
CDH11-212ENST00000566827 EEPD1Q7L9B9 569 aa12.66□□□□□ -0.38
CDH11-212ENST00000566827 PLEKHH3Q7Z736 793 aa12.66□□□□□ -0.38
CDH11-212ENST00000566827 TTC14Q96N46 770 aa12.66□□□□□ -0.38
CDH11-212ENST00000566827 TMUB1Q9BVT8 246 aa12.66□□□□□ -0.38
CDH11-212ENST00000566827 UNC93B1Q9H1C4 597 aa12.66□□□□□ -0.38
CDH11-212ENST00000566827 GABBR1Q9UBS5 961 aa12.66□□□□□ -0.38
CDH11-212ENST00000566827 FEM1BQ9UK73 627 aa12.66□□□□□ -0.38
CDH11-212ENST00000566827 PLXNA1Q9UIW2 1896 aa12.66□□□□□ -0.38
CDH11-212ENST00000566827 CCDC194A0A1B0GVG4 234 aa12.66□□□□□ -0.38
CDH11-212ENST00000566827 PARP1P09874 1014 aaKnown RBP12.66□□□□□ -0.38
CDH11-212ENST00000566827 PCP11498 1178 aaKnown RBP12.66□□□□□ -0.38
CDH11-212ENST00000566827 CCND3P30281 292 aaPredicted RBP12.66□□□□□ -0.38
CDH11-212ENST00000566827 GRK4P32298 578 aa12.66□□□□□ -0.38
CDH11-212ENST00000566827 GLIPR1L2Q4G1C9 344 aa12.66□□□□□ -0.38
CDH11-212ENST00000566827 NSMFQ6X4W1 530 aa12.66□□□□□ -0.38
CDH11-212ENST00000566827 DHX32Q7L7V1 743 aaKnown RBP12.66□□□□□ -0.38
CDH11-212ENST00000566827 SRBD1Q8N5C6 995 aaKnown RBP12.66□□□□□ -0.38
CDH11-212ENST00000566827 COA7Q96BR5 231 aa12.66□□□□□ -0.38
CDH11-212ENST00000566827 TEX13BQ9BXU2 312 aa12.66□□□□□ -0.38
CDH11-212ENST00000566827 CCPG1Q9ULG6 757 aa12.66□□□□□ -0.38
CDH11-212ENST00000566827 hCG_2014768A0A024R1R8 64 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 KLF18A0A0U1RQI7 1052 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 ATG7O95352 703 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 LARGE1O95461 756 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 INHAP05111 366 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 TOB2Q14106 344 aaPredicted RBP12.65□□□□□ -0.38
CDH11-212ENST00000566827 CDC37Q16543 378 aaPredicted RBP12.65□□□□□ -0.38
CDH11-212ENST00000566827 PTPROQ16827 1216 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 QRICH1Q2TAL8 776 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 MORN1Q5T089 497 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 RNF20Q5VTR2 975 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 APOA5Q6Q788 366 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 METTL14Q9HCE5 456 aaKnown RBP12.65□□□□□ -0.38
CDH11-212ENST00000566827 PCDHB8Q9UN66 801 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 FARP1Q9Y4F1 1045 aaPredicted RBP12.65□□□□□ -0.38
CDH11-212ENST00000566827 PCDHB13Q9Y5F0 798 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 ERICH2A1L162 156 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 PTPREP23469 700 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 SSTR3P32745 418 aaPredicted RBP12.65□□□□□ -0.38
CDH11-212ENST00000566827 MARSP56192 900 aaKnown RBP12.65□□□□□ -0.38
CDH11-212ENST00000566827 SLC30A10Q6XR72 485 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 EFCAB3Q8N7B9 438 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 DHX38Q92620 1227 aaKnown RBP12.65□□□□□ -0.38
CDH11-212ENST00000566827 GPKOWQ92917 476 aaPredicted RBP eCLIP12.65□□□□□ -0.38
CDH11-212ENST00000566827 FGD4Q96M96 766 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 TRERF1Q96PN7 1200 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 A1CFQ9NQ94 594 aaKnown RBP12.65□□□□□ -0.38
CDH11-212ENST00000566827 RNF146Q9NTX7 359 aa12.65□□□□□ -0.38
CDH11-212ENST00000566827 FAM217BQ9NTX9 383 aaPredicted RBP12.65□□□□□ -0.38
CDH11-212ENST00000566827 XIRP2A4UGR9 3374 aa12.65□□□□□ -0.39
CDH11-212ENST00000566827 OPLAHO14841 1288 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 ADCY6O43306 1168 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 HOXA13P31271 388 aaPredicted RBP12.64□□□□□ -0.39
CDH11-212ENST00000566827 UBXN2AP68543 259 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 BLOC1S2Q6QNY1 142 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 DPP9Q86TI2 863 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 DCAF4Q8WV16 495 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 ANKS1AQ92625 1134 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 PHKBQ93100 1093 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 KIF2CQ99661 725 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 NUDT12Q9BQG2 462 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 CCDC69A6NI79 296 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 RPS6KB1P23443 525 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 IGBP1P78318 339 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms