RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 FKTNO75072 461 aa13.25□□□□□ -0.29
KARS-207ENST00000566560 FMNL1O95466 1100 aaPredicted RBP13.25□□□□□ -0.29
KARS-207ENST00000566560 CTDNEP1O95476 244 aa13.25□□□□□ -0.29
KARS-207ENST00000566560 SLC25A27O95847 323 aa13.25□□□□□ -0.29
KARS-207ENST00000566560 HSPA8P11142 646 aaKnown RBP13.25□□□□□ -0.29
KARS-207ENST00000566560 MAPK4P31152 587 aa13.25□□□□□ -0.29
KARS-207ENST00000566560 FCGRTP55899 365 aa13.25□□□□□ -0.29
KARS-207ENST00000566560 SSRP1Q08945 709 aaKnown RBP13.25□□□□□ -0.29
KARS-207ENST00000566560 KIF22Q14807 665 aa13.25□□□□□ -0.29
KARS-207ENST00000566560 TKFCQ3LXA3 575 aa13.25□□□□□ -0.29
KARS-207ENST00000566560 HEATR3Q7Z4Q2 680 aa13.25□□□□□ -0.29
KARS-207ENST00000566560 SLAIN1Q8ND83 568 aa13.25□□□□□ -0.29
KARS-207ENST00000566560 NSUN7Q8NE18 718 aaKnown RBP13.25□□□□□ -0.29
KARS-207ENST00000566560 GPKOWQ92917 476 aaPredicted RBP eCLIP13.25□□□□□ -0.29
KARS-207ENST00000566560 ERO1AQ96HE7 468 aa13.25□□□□□ -0.29
KARS-207ENST00000566560 ACAD9Q9H845 621 aa13.25□□□□□ -0.29
KARS-207ENST00000566560 EFCC1Q9HA90 598 aa13.25□□□□□ -0.29
KARS-207ENST00000566560 V9GY48 417 aaPredicted RBP13.25□□□□□ -0.29
KARS-207ENST00000566560 LCTP09848 1927 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 hCG_1984214I3L0E3 225 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 TNPO2O14787 897 aaKnown RBP13.24□□□□□ -0.29
KARS-207ENST00000566560 PRPF3O43395 683 aaKnown RBP13.24□□□□□ -0.29
KARS-207ENST00000566560 JAK2O60674 1132 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 DEXIO95424 95 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 SCG2P13521 617 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 CTCFP49711 727 aaPredicted RBP13.24□□□□□ -0.29
KARS-207ENST00000566560 TRAF1Q13077 416 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 PFKFB3Q16875 520 aaPredicted RBP13.24□□□□□ -0.29
KARS-207ENST00000566560 LHX8Q68G74 356 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 WWC2Q6AWC2 1192 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 GPR142Q7Z601 462 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 ZNF713Q8N859 430 aaPredicted RBP13.24□□□□□ -0.29
KARS-207ENST00000566560 CHST13Q8NET6 341 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 CD99L2Q8TCZ2 262 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 TRERF1Q96PN7 1200 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 ARHGAP39Q9C0H5 1083 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 MROH8Q9H579 483 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 FBXO40Q9UH90 709 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 RIPK3Q9Y572 518 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 PCDHA1Q9Y5I3 950 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 IVNS1ABPQ9Y6Y0 642 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 PLXNA1Q9UIW2 1896 aa13.24□□□□□ -0.29
KARS-207ENST00000566560 PCNTO95613 3336 aa13.23□□□□□ -0.29
KARS-207ENST00000566560 DTNBO60941 627 aa13.23□□□□□ -0.29
KARS-207ENST00000566560 CTGFP29279 349 aa13.23□□□□□ -0.29
KARS-207ENST00000566560 NAPAP54920 295 aa13.23□□□□□ -0.29
KARS-207ENST00000566560 PPP1R18Q6NYC8 613 aa13.23□□□□□ -0.29
KARS-207ENST00000566560 COA7Q96BR5 231 aa13.23□□□□□ -0.29
KARS-207ENST00000566560 DDX11Q96FC9 970 aa13.23□□□□□ -0.29
KARS-207ENST00000566560 LLPHQ9BRT6 129 aaKnown RBP13.23□□□□□ -0.29
KARS-207ENST00000566560 ORC3Q9UBD5 711 aaPredicted RBP13.23□□□□□ -0.29
KARS-207ENST00000566560 MRPL11Q9Y3B7 192 aaKnown RBP13.23□□□□□ -0.29
KARS-207ENST00000566560 ZNFX1Q9P2E3 1918 aaKnown RBP13.22□□□□□ -0.29
KARS-207ENST00000566560 NFIBO00712 420 aa13.22□□□□□ -0.29
KARS-207ENST00000566560 PSMC4P43686 418 aa13.22□□□□□ -0.29
KARS-207ENST00000566560 LBX1P52954 281 aa13.22□□□□□ -0.29
KARS-207ENST00000566560 HMGN5P82970 282 aaKnown RBP13.22□□□□□ -0.29
KARS-207ENST00000566560 KCTD2Q14681 263 aa13.22□□□□□ -0.29
KARS-207ENST00000566560 PKN1Q16512 942 aa13.22□□□□□ -0.29
KARS-207ENST00000566560 MUM1L1Q5H9M0 696 aa13.22□□□□□ -0.29
KARS-207ENST00000566560 PLEKHH3Q7Z736 793 aa13.22□□□□□ -0.29
KARS-207ENST00000566560 SOCS4Q8WXH5 440 aa13.22□□□□□ -0.29
KARS-207ENST00000566560 TRIM47Q96LD4 638 aa13.22□□□□□ -0.29
KARS-207ENST00000566560 MMP19Q99542 508 aa13.22□□□□□ -0.29
KARS-207ENST00000566560 BARHL2Q9NY43 387 aa13.22□□□□□ -0.29
KARS-207ENST00000566560 PFASO15067 1338 aa13.21□□□□□ -0.29
KARS-207ENST00000566560 STXBP3O00186 592 aa13.21□□□□□ -0.29
KARS-207ENST00000566560 FCER1AP12319 257 aa13.21□□□□□ -0.29
KARS-207ENST00000566560 GRB14Q14449 540 aa13.21□□□□□ -0.29
KARS-207ENST00000566560 TYW1BQ6NUM6 668 aa13.21□□□□□ -0.29
KARS-207ENST00000566560 NSMFQ6X4W1 530 aa13.21□□□□□ -0.29
KARS-207ENST00000566560 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.21□□□□□ -0.29
KARS-207ENST00000566560 ANKRD35Q8N283 1001 aa13.21□□□□□ -0.29
KARS-207ENST00000566560 CCDC148Q8NFR7 591 aa13.21□□□□□ -0.29
KARS-207ENST00000566560 SMARCC2Q8TAQ2 1214 aa13.21□□□□□ -0.29
KARS-207ENST00000566560 CCDC12Q8WUD4 166 aaPredicted RBP13.21□□□□□ -0.29
KARS-207ENST00000566560 CLEC4DQ8WXI8 215 aa13.21□□□□□ -0.29
KARS-207ENST00000566560 WASF1Q92558 559 aa13.21□□□□□ -0.29
KARS-207ENST00000566560 A1CFQ9NQ94 594 aaKnown RBP13.21□□□□□ -0.29
KARS-207ENST00000566560 VPS54Q9P1Q0 977 aa13.21□□□□□ -0.29
KARS-207ENST00000566560 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.21□□□□□ -0.29
KARS-207ENST00000566560 LRRC37A2A6NM11 1700 aa13.2□□□□□ -0.3
KARS-207ENST00000566560 OPLAHO14841 1288 aa13.2□□□□□ -0.3
KARS-207ENST00000566560 PTPREP23469 700 aa13.2□□□□□ -0.3
KARS-207ENST00000566560 ADORA2AP29274 412 aa13.2□□□□□ -0.3
KARS-207ENST00000566560 CAP1Q01518 475 aa13.2□□□□□ -0.3
KARS-207ENST00000566560 CUL4AQ13619 759 aa13.2□□□□□ -0.3
KARS-207ENST00000566560 ARHGEF6Q15052 776 aa13.2□□□□□ -0.3
KARS-207ENST00000566560 SLC30A10Q6XR72 485 aa13.2□□□□□ -0.3
KARS-207ENST00000566560 MCF2L2Q86YR7 1114 aa13.2□□□□□ -0.3
KARS-207ENST00000566560 ABRAQ8N0Z2 381 aa13.2□□□□□ -0.3
KARS-207ENST00000566560 FAM184AQ8NB25 1140 aa13.2□□□□□ -0.3
KARS-207ENST00000566560 AIFM3Q96NN9 605 aa13.2□□□□□ -0.3
KARS-207ENST00000566560 ALG1Q9BT22 464 aa13.2□□□□□ -0.3
KARS-207ENST00000566560 ESYT2A0FGR8 921 aa13.19□□□□□ -0.3
KARS-207ENST00000566560 SLC15A5A6NIM6 579 aa13.19□□□□□ -0.3
KARS-207ENST00000566560 STRNO43815 780 aa13.19□□□□□ -0.3
KARS-207ENST00000566560 SLC34A2O95436 690 aa13.19□□□□□ -0.3
KARS-207ENST00000566560 CFBP00751 764 aa13.19□□□□□ -0.3
KARS-207ENST00000566560 GNRH1P01148 92 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms