RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 ATXN8OSP0DMR3 200 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 FCER1AP12319 257 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 FLT3LGP49771 235 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 RPS6P62753 249 aaKnown RBP9.42□□□□□ -0.9
CDH13-208ENST00000566333 CNTN2Q02246 1040 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 SSRP1Q08945 709 aaKnown RBP9.42□□□□□ -0.9
CDH13-208ENST00000566333 MAP2K5Q13163 448 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 IRF5Q13568 498 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 KIF22Q14807 665 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 CPLX2Q6PUV4 134 aaKnown RBP9.42□□□□□ -0.9
CDH13-208ENST00000566333 CTU1Q7Z7A3 348 aaKnown RBP9.42□□□□□ -0.9
CDH13-208ENST00000566333 TRIM22Q8IYM9 498 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 NPLOC4Q8TAT6 608 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 PURBQ96QR8 312 aaKnown RBP9.42□□□□□ -0.9
CDH13-208ENST00000566333 LLPHQ9BRT6 129 aaKnown RBP9.42□□□□□ -0.9
CDH13-208ENST00000566333 VPS54Q9P1Q0 977 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 ORC3Q9UBD5 711 aaPredicted RBP9.42□□□□□ -0.9
CDH13-208ENST00000566333 MRPL11Q9Y3B7 192 aaKnown RBP9.42□□□□□ -0.9
CDH13-208ENST00000566333 TRIM17Q9Y577 477 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 PTCH2Q9Y6C5 1203 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 IVNS1ABPQ9Y6Y0 642 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 DNAH12Q6ZR08 3092 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 MKI67P46013 3256 aaKnown RBP9.41□□□□□ -0.9
CDH13-208ENST00000566333 MEIS2O14770 477 aa9.41□□□□□ -0.9
CDH13-208ENST00000566333 HOXA13P31271 388 aaPredicted RBP9.41□□□□□ -0.9
CDH13-208ENST00000566333 RGS2P41220 211 aa9.41□□□□□ -0.9
CDH13-208ENST00000566333 NAPAP54920 295 aa9.41□□□□□ -0.9
CDH13-208ENST00000566333 BAATQ14032 418 aaPredicted RBP9.41□□□□□ -0.9
CDH13-208ENST00000566333 KCTD2Q14681 263 aa9.41□□□□□ -0.9
CDH13-208ENST00000566333 CCL14Q16627 93 aa9.41□□□□□ -0.9
CDH13-208ENST00000566333 ZNF792Q3KQV3 632 aa9.41□□□□□ -0.9
CDH13-208ENST00000566333 NSMFQ6X4W1 530 aa9.41□□□□□ -0.9
CDH13-208ENST00000566333 CCAR1Q8IX12 1150 aaKnown RBP9.41□□□□□ -0.9
CDH13-208ENST00000566333 ANKRD35Q8N283 1001 aa9.41□□□□□ -0.9
CDH13-208ENST00000566333 RGS22Q8NE09 1264 aa9.41□□□□□ -0.9
CDH13-208ENST00000566333 SYTL5Q8TDW5 730 aaPredicted RBP9.41□□□□□ -0.9
CDH13-208ENST00000566333 TRIB2Q92519 343 aa9.41□□□□□ -0.9
CDH13-208ENST00000566333 DDX11Q96FC9 970 aa9.41□□□□□ -0.9
CDH13-208ENST00000566333 NUDT12Q9BQG2 462 aa9.41□□□□□ -0.9
CDH13-208ENST00000566333 ZMYND12Q9H0C1 365 aa9.41□□□□□ -0.9
CDH13-208ENST00000566333 GJB4Q9NTQ9 266 aa9.41□□□□□ -0.9
CDH13-208ENST00000566333 FLRT1Q9NZU1 646 aa9.41□□□□□ -0.9
CDH13-208ENST00000566333 RPTORQ8N122 1335 aa9.4□□□□□ -0.9
CDH13-208ENST00000566333 SOWAHBA6NEL2 793 aa9.4□□□□□ -0.9
CDH13-208ENST00000566333 PIK3CDO00329 1044 aa9.4□□□□□ -0.9
CDH13-208ENST00000566333 CFBP00751 764 aa9.4□□□□□ -0.9
CDH13-208ENST00000566333 XRCC5P13010 732 aaKnown RBP9.4□□□□□ -0.9
CDH13-208ENST00000566333 ELNP15502 786 aa9.4□□□□□ -0.9
CDH13-208ENST00000566333 CYP2B6P20813 491 aa9.4□□□□□ -0.9
CDH13-208ENST00000566333 CLK2P49760 499 aaKnown RBP9.4□□□□□ -0.9
CDH13-208ENST00000566333 PRMT2P55345 433 aa9.4□□□□□ -0.9
CDH13-208ENST00000566333 TRAF1Q13077 416 aa9.4□□□□□ -0.9
CDH13-208ENST00000566333 UBE2SQ16763 222 aa9.4□□□□□ -0.9
CDH13-208ENST00000566333 USP17L6PQ6QN14 398 aa9.4□□□□□ -0.9
CDH13-208ENST00000566333 RNF207Q6ZRF8 634 aa9.4□□□□□ -0.9
CDH13-208ENST00000566333 MAML3Q96JK9 1138 aa9.4□□□□□ -0.9
CDH13-208ENST00000566333 ALG1Q9BT22 464 aa9.4□□□□□ -0.9
CDH13-208ENST00000566333 MAF1Q9H063 256 aa9.4□□□□□ -0.9
CDH13-208ENST00000566333 CWC22Q9HCG8 908 aaKnown RBP9.4□□□□□ -0.9
CDH13-208ENST00000566333 RIC8AQ9NPQ8 531 aa9.4□□□□□ -0.9
CDH13-208ENST00000566333 SH3GLB2Q9NR46 395 aa9.4□□□□□ -0.9
CDH13-208ENST00000566333 PTPN22Q9Y2R2 807 aa9.4□□□□□ -0.9
CDH13-208ENST00000566333 DDX49Q9Y6V7 483 aaKnown RBP9.4□□□□□ -0.9
CDH13-208ENST00000566333 POTEB2H3BUK9 544 aa9.39□□□□□ -0.91
CDH13-208ENST00000566333 M0R2N6 131 aa9.39□□□□□ -0.91
CDH13-208ENST00000566333 EDNRBP24530 442 aa9.39□□□□□ -0.91
CDH13-208ENST00000566333 CALML3P27482 149 aa9.39□□□□□ -0.91
CDH13-208ENST00000566333 ALDH5A1P51649 535 aaPredicted RBP9.39□□□□□ -0.91
CDH13-208ENST00000566333 ADCY7P51828 1080 aa9.39□□□□□ -0.91
CDH13-208ENST00000566333 HMGN5P82970 282 aaKnown RBP9.39□□□□□ -0.91
CDH13-208ENST00000566333 AKAP17AQ02040 695 aaKnown RBP9.39□□□□□ -0.91
CDH13-208ENST00000566333 OLFML2BQ68BL8 750 aa9.39□□□□□ -0.91
CDH13-208ENST00000566333 ZNF467Q7Z7K2 595 aaPredicted RBP9.39□□□□□ -0.91
CDH13-208ENST00000566333 MCF2L2Q86YR7 1114 aa9.39□□□□□ -0.91
CDH13-208ENST00000566333 HSCBQ8IWL3 235 aa9.39□□□□□ -0.91
CDH13-208ENST00000566333 FAM177A1Q8N128 213 aaPredicted RBP9.39□□□□□ -0.91
CDH13-208ENST00000566333 SAMD3Q8N6K7 520 aa9.39□□□□□ -0.91
CDH13-208ENST00000566333 DAGLBQ8NCG7 672 aa9.39□□□□□ -0.91
CDH13-208ENST00000566333 CCDC148Q8NFR7 591 aa9.39□□□□□ -0.91
CDH13-208ENST00000566333 IL31RAQ8NI17 732 aa9.39□□□□□ -0.91
CDH13-208ENST00000566333 CUL5Q93034 780 aa9.39□□□□□ -0.91
CDH13-208ENST00000566333 PHF20Q9BVI0 1012 aa9.39□□□□□ -0.91
CDH13-208ENST00000566333 PSTPIP2Q9H939 334 aa9.39□□□□□ -0.91
CDH13-208ENST00000566333 DIS3Q9Y2L1 958 aaKnown RBP9.39□□□□□ -0.91
CDH13-208ENST00000566333 SYNGAP1Q96PV0 1343 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 SMCO2A6NFE2 343 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 GCOM1H8Y6P7 765 aaPredicted RBP9.38□□□□□ -0.91
CDH13-208ENST00000566333 ADCY3O60266 1144 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 HMGCRP04035 888 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 POLR2MP0CAP2 368 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 HOXD10P28358 340 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 GJB2P29033 226 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 FOSBP53539 338 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 TRIM32Q13049 653 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 ARHGEF6Q15052 776 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 MAP3K21Q5TCX8 1036 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 FBXO46Q6PJ61 603 aaPredicted RBP9.38□□□□□ -0.91
CDH13-208ENST00000566333 MAMDC4Q6UXC1 1216 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 DPP9Q86TI2 863 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 TEX2Q8IWB9 1127 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms