RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 JAG1P78504 1218 aa19.11■□□□□ 0.65
RAB40C-210ENST00000566290 SHROOM1Q2M3G4 852 aaPredicted RBP19.11■□□□□ 0.65
RAB40C-210ENST00000566290 TYW1BQ6NUM6 668 aa19.11■□□□□ 0.65
RAB40C-210ENST00000566290 CKAP2LQ8IYA6 745 aa19.11■□□□□ 0.65
RAB40C-210ENST00000566290 CCDC34Q96HJ3 373 aa19.11■□□□□ 0.65
RAB40C-210ENST00000566290 SDF4Q9BRK5 362 aa19.11■□□□□ 0.65
RAB40C-210ENST00000566290 ARHGAP39Q9C0H5 1083 aa19.11■□□□□ 0.65
RAB40C-210ENST00000566290 GINM1Q9NU53 330 aa19.11■□□□□ 0.65
RAB40C-210ENST00000566290 CLIP2Q9UDT6 1046 aa19.11■□□□□ 0.65
RAB40C-210ENST00000566290 KCNH3Q9ULD8 1083 aa19.11■□□□□ 0.65
RAB40C-210ENST00000566290 hCG_1642624A0A1W2PR95 340 aa19.1■□□□□ 0.65
RAB40C-210ENST00000566290 MOGSQ13724 837 aa19.1■□□□□ 0.65
RAB40C-210ENST00000566290 ARHGEF6Q15052 776 aa19.1■□□□□ 0.65
RAB40C-210ENST00000566290 MTFR1Q15390 333 aa19.1■□□□□ 0.65
RAB40C-210ENST00000566290 EARS2Q5JPH6 523 aaKnown RBP19.1■□□□□ 0.65
RAB40C-210ENST00000566290 USP17L2Q6R6M4 530 aa19.1■□□□□ 0.65
RAB40C-210ENST00000566290 RNF214Q8ND24 703 aa19.1■□□□□ 0.65
RAB40C-210ENST00000566290 KCNH4Q9UQ05 1017 aa19.1■□□□□ 0.65
RAB40C-210ENST00000566290 LAMA3Q16787 3333 aa19.1■□□□□ 0.65
RAB40C-210ENST00000566290 DOCK1Q14185 1865 aa19.09■□□□□ 0.65
RAB40C-210ENST00000566290 PHIPQ8WWQ0 1821 aa19.09■□□□□ 0.65
RAB40C-210ENST00000566290 PNMA6FA0A0J9YX94 578 aa19.09■□□□□ 0.65
RAB40C-210ENST00000566290 CCDC194A0A1B0GVG4 234 aa19.09■□□□□ 0.65
RAB40C-210ENST00000566290 BTBD19C9JJ37 291 aa19.09■□□□□ 0.65
RAB40C-210ENST00000566290 CTNND1O60716 968 aaKnown RBP19.09■□□□□ 0.65
RAB40C-210ENST00000566290 SNAPC2Q13487 334 aa19.09■□□□□ 0.65
RAB40C-210ENST00000566290 ABCB5Q2M3G0 1257 aa19.09■□□□□ 0.65
RAB40C-210ENST00000566290 ANO6Q4KMQ2 910 aa19.09■□□□□ 0.65
RAB40C-210ENST00000566290 MCTP2Q6DN12 878 aa19.09■□□□□ 0.65
RAB40C-210ENST00000566290 KRBA2Q6ZNG9 492 aa19.09■□□□□ 0.65
RAB40C-210ENST00000566290 HEATR3Q7Z4Q2 680 aa19.09■□□□□ 0.65
RAB40C-210ENST00000566290 NAT10Q9H0A0 1025 aaKnown RBP19.09■□□□□ 0.65
RAB40C-210ENST00000566290 PCDHA6Q9UN73 950 aa19.09■□□□□ 0.65
RAB40C-210ENST00000566290 PCDHA8Q9Y5H6 950 aa19.09■□□□□ 0.65
RAB40C-210ENST00000566290 ZHX2Q9Y6X8 837 aa19.09■□□□□ 0.65
RAB40C-210ENST00000566290 ZSWIM8A7E2V4 1837 aa19.09■□□□□ 0.65
RAB40C-210ENST00000566290 CETPP11597 493 aa19.08■□□□□ 0.64
RAB40C-210ENST00000566290 ZNF165P49910 485 aa19.08■□□□□ 0.64
RAB40C-210ENST00000566290 NAPAP54920 295 aa19.08■□□□□ 0.64
RAB40C-210ENST00000566290 ICA1Q05084 483 aa19.08■□□□□ 0.64
RAB40C-210ENST00000566290 TAF1CQ15572 869 aaPredicted RBP19.08■□□□□ 0.64
RAB40C-210ENST00000566290 NT5DC1Q5TFE4 455 aa19.08■□□□□ 0.64
RAB40C-210ENST00000566290 BTNL9Q6UXG8 535 aa19.08■□□□□ 0.64
RAB40C-210ENST00000566290 CEP57L1Q8IYX8 460 aa19.08■□□□□ 0.64
RAB40C-210ENST00000566290 LRRC47Q8N1G4 583 aaKnown RBP19.08■□□□□ 0.64
RAB40C-210ENST00000566290 GPKOWQ92917 476 aaPredicted RBP eCLIP19.08■□□□□ 0.64
RAB40C-210ENST00000566290 ZFYVE28Q9HCC9 887 aa19.08■□□□□ 0.64
RAB40C-210ENST00000566290 AFG3L2Q9Y4W6 797 aa19.08■□□□□ 0.64
RAB40C-210ENST00000566290 FAM205CA6NFA0 338 aa19.07■□□□□ 0.64
RAB40C-210ENST00000566290 GOLGA8HP0CJ92 632 aa19.07■□□□□ 0.64
RAB40C-210ENST00000566290 LONP1P36776 959 aaKnown RBP19.07■□□□□ 0.64
RAB40C-210ENST00000566290 CAP2P40123 477 aa19.07■□□□□ 0.64
RAB40C-210ENST00000566290 SARM1Q6SZW1 724 aa19.07■□□□□ 0.64
RAB40C-210ENST00000566290 PIK3AP1Q6ZUJ8 805 aa19.07■□□□□ 0.64
RAB40C-210ENST00000566290 UBE2Q1Q7Z7E8 422 aa19.07■□□□□ 0.64
RAB40C-210ENST00000566290 C4orf32Q8N8J7 132 aa19.07■□□□□ 0.64
RAB40C-210ENST00000566290 TRIML1Q8N9V2 468 aa19.07■□□□□ 0.64
RAB40C-210ENST00000566290 TRIM44Q96DX7 344 aaPredicted RBP19.07■□□□□ 0.64
RAB40C-210ENST00000566290 PIGSQ96S52 555 aa19.07■□□□□ 0.64
RAB40C-210ENST00000566290 JMJD4Q9H9V9 463 aa19.07■□□□□ 0.64
RAB40C-210ENST00000566290 CBX8Q9HC52 389 aa19.07■□□□□ 0.64
RAB40C-210ENST00000566290 PICK1Q9NRD5 415 aa19.07■□□□□ 0.64
RAB40C-210ENST00000566290 ZBTB5O15062 677 aa19.06■□□□□ 0.64
RAB40C-210ENST00000566290 EEF2P13639 858 aaKnown RBP19.06■□□□□ 0.64
RAB40C-210ENST00000566290 TRAF1Q13077 416 aa19.06■□□□□ 0.64
RAB40C-210ENST00000566290 SEMA3FQ13275 785 aa19.06■□□□□ 0.64
RAB40C-210ENST00000566290 IQCB1Q15051 598 aa19.06■□□□□ 0.64
RAB40C-210ENST00000566290 NONOQ15233 471 aaKnown RBP eCLIP19.06■□□□□ 0.641e-6■■■■□ 24.9
RAB40C-210ENST00000566290 CT47A1Q5JQC4 288 aaPredicted RBP19.06■□□□□ 0.64
RAB40C-210ENST00000566290 SIAH1Q8IUQ4 282 aa19.06■□□□□ 0.64
RAB40C-210ENST00000566290 CLIC6Q96NY7 704 aa19.06■□□□□ 0.64
RAB40C-210ENST00000566290 ATAD5Q96QE3 1844 aa19.05■□□□□ 0.64
RAB40C-210ENST00000566290 MPHOSPH10O00566 681 aaKnown RBP19.05■□□□□ 0.64
RAB40C-210ENST00000566290 PLA2G6O60733 806 aa19.05■□□□□ 0.64
RAB40C-210ENST00000566290 ECM2O94769 699 aaPredicted RBP19.05■□□□□ 0.64
RAB40C-210ENST00000566290 GDF11O95390 407 aa19.05■□□□□ 0.64
RAB40C-210ENST00000566290 NLRP12P59046 1061 aa19.05■□□□□ 0.64
RAB40C-210ENST00000566290 MDM2Q00987 491 aaPredicted RBP19.05■□□□□ 0.64
RAB40C-210ENST00000566290 GPAT2Q6NUI2 795 aa19.05■□□□□ 0.64
RAB40C-210ENST00000566290 REXO1Q8N1G1 1221 aaKnown RBP19.05■□□□□ 0.64
RAB40C-210ENST00000566290 SPATA20Q8TB22 786 aa19.05■□□□□ 0.64
RAB40C-210ENST00000566290 NAP1L4Q99733 375 aaKnown RBP19.05■□□□□ 0.64
RAB40C-210ENST00000566290 CSRNP2Q9H175 543 aa19.05■□□□□ 0.64
RAB40C-210ENST00000566290 RIC8AQ9NPQ8 531 aa19.05■□□□□ 0.64
RAB40C-210ENST00000566290 SMCO2A6NFE2 343 aa19.04■□□□□ 0.64
RAB40C-210ENST00000566290 CXCL11O14625 94 aa19.04■□□□□ 0.64
RAB40C-210ENST00000566290 ACTN4O43707 911 aaKnown RBP19.04■□□□□ 0.64
RAB40C-210ENST00000566290 PTGDRQ13258 359 aa19.04■□□□□ 0.64
RAB40C-210ENST00000566290 TPRNQ4KMQ1 711 aa19.04■□□□□ 0.64
RAB40C-210ENST00000566290 SLFN13Q68D06 897 aa19.04■□□□□ 0.64
RAB40C-210ENST00000566290 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.04■□□□□ 0.64
RAB40C-210ENST00000566290 ADGRF4Q8IZF3 695 aa19.04■□□□□ 0.64
RAB40C-210ENST00000566290 AK8Q96MA6 479 aa19.04■□□□□ 0.64
RAB40C-210ENST00000566290 SH2D4AQ9H788 454 aa19.04■□□□□ 0.64
RAB40C-210ENST00000566290 CCDC39Q9UFE4 941 aa19.04■□□□□ 0.64
RAB40C-210ENST00000566290 A0A0G2JLL6 359 aaPredicted RBP19.03■□□□□ 0.64
RAB40C-210ENST00000566290 IKBKBO14920 756 aa19.03■□□□□ 0.64
RAB40C-210ENST00000566290 SLFN14P0C7P3 912 aa19.03■□□□□ 0.64
RAB40C-210ENST00000566290 CLK2P49760 499 aaKnown RBP19.03■□□□□ 0.64
RAB40C-210ENST00000566290 ADCY7P51828 1080 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms