RNA–Protein interactions for RNA: ENST00000566251.1

TUBGCP4-211, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-211ENST00000566251 TAF1DQ9H5J8 278 aaPredicted RBP11.26□□□□□ -0.61
TUBGCP4-211ENST00000566251 BIN2Q9UBW5 565 aaPredicted RBP11.26□□□□□ -0.61
TUBGCP4-211ENST00000566251 TCHHQ07283 1943 aa11.26□□□□□ -0.61
TUBGCP4-211ENST00000566251 SYCE3A1L190 88 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 UNCXA6NJT0 531 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 SPDYE3A6NKU9 549 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 KIF3CO14782 793 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 CCDC192P0DO97 292 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 GCFC2P16383 781 aaKnown RBP11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 MCM7P33993 719 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 TXLNAP40222 546 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 SYKP43405 635 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 MRE11P49959 708 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 ATP2C1P98194 919 aaPredicted RBP11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 PTGDRQ13258 359 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 INF2Q27J81 1249 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 AXDND1Q5T1B0 1012 aaPredicted RBP11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 JAKMIP3Q5VZ66 844 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 RESP18Q5W5W9 173 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 SASS6Q6UVJ0 657 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 DTHD1Q6ZMT9 781 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 PIP4P2Q8N4L2 257 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 SAMD3Q8N6K7 520 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 ANP32BQ92688 251 aaKnown RBP11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 ZKSCAN4Q969J2 545 aaPredicted RBP11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 TANGO6Q9C0B7 1094 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 RANBP17Q9H2T7 1088 aaKnown RBP11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 TSPY26PQ9H489 355 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 USP25Q9UHP3 1055 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 ABCB11O95342 1321 aa11.25□□□□□ -0.61
TUBGCP4-211ENST00000566251 FAM237AA0A1B0GTK4 181 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 A0A1B0GVL5 298 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 TTLL13PA6NNM8 815 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 MARCH6O60337 910 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 CCNT1O60563 726 aaKnown RBP11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 NR1I2O75469 434 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 CAVIN2O95810 425 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 LONP1P36776 959 aaKnown RBP11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 PRPHP41219 470 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 USP11P51784 963 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 MTMR2Q13614 643 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 LETM2Q2VYF4 491 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 MCF2L2Q86YR7 1114 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 ANKRD13AQ8IZ07 590 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 RASGRP4Q8TDF6 673 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 TBCKQ8TEA7 893 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 CDCA5Q96FF9 252 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 C12orf42Q96LP6 360 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 RAB34Q9BZG1 259 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 FBXO2Q9UK22 296 aaPredicted RBP11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 KCNH3Q9ULD8 1083 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 MYH15Q9Y2K3 1946 aa11.24□□□□□ -0.61
TUBGCP4-211ENST00000566251 FAM205CA6NFA0 338 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 USP17L15C9J2P7 530 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 USP17L13C9JLJ4 530 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 ADM5C9JUS6 153 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 USP17L11C9JVI0 530 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 USP17L18D6R9N7 530 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 USP17L22D6RA61 530 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 USP17L17D6RBQ6 530 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 USP17L19D6RCP7 530 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 USP17L20D6RJB6 530 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 GCOM1H8Y6P7 765 aaPredicted RBP11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 PPP1R11O60927 126 aaPredicted RBP11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 FLOT1O75955 427 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 ZNF202O95125 648 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 ICAM1P05362 532 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 POLR2MP0CAP2 368 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 PFKFB1P16118 471 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 APLP1P51693 650 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 NDUFA8P51970 172 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 USP17L24Q0WX57 530 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 PRKG1Q13976 671 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 MCM6Q14566 821 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 TMEM266Q2M3C6 531 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 USH1GQ495M9 461 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 EARS2Q5JPH6 523 aaKnown RBP11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 ELOA2Q8IYF1 753 aaPredicted RBP11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 FMR1NBQ8N0W7 255 aaPredicted RBP11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 ENGASEQ8NFI3 743 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 AK8Q96MA6 479 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 GLIS2Q9BZE0 524 aaPredicted RBP11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 RPAP3Q9H6T3 665 aaPredicted RBP11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 HOXC10Q9NYD6 342 aa11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 MAP3K20Q9NYL2 800 aaKnown RBP11.23□□□□□ -0.61
TUBGCP4-211ENST00000566251 PIK3CDO00329 1044 aa11.22□□□□□ -0.61
TUBGCP4-211ENST00000566251 CXCL11O14625 94 aa11.22□□□□□ -0.61
TUBGCP4-211ENST00000566251 NEMFO60524 1076 aa11.22□□□□□ -0.61
TUBGCP4-211ENST00000566251 VCAM1P19320 739 aa11.22□□□□□ -0.61
TUBGCP4-211ENST00000566251 CLK2P49760 499 aaKnown RBP11.22□□□□□ -0.61
TUBGCP4-211ENST00000566251 PPATQ06203 517 aa11.22□□□□□ -0.61
TUBGCP4-211ENST00000566251 SNW1Q13573 536 aaKnown RBP11.22□□□□□ -0.61
TUBGCP4-211ENST00000566251 COG2Q14746 738 aa11.22□□□□□ -0.61
TUBGCP4-211ENST00000566251 CAMK4Q16566 473 aa11.22□□□□□ -0.61
TUBGCP4-211ENST00000566251 SH3D19Q5HYK7 790 aa11.22□□□□□ -0.61
TUBGCP4-211ENST00000566251 KIAA1755Q5JYT7 1200 aa11.22□□□□□ -0.61
TUBGCP4-211ENST00000566251 PPP4R3AQ6IN85 833 aa11.22□□□□□ -0.61
TUBGCP4-211ENST00000566251 CCDC174Q6PII3 467 aa11.22□□□□□ -0.61
TUBGCP4-211ENST00000566251 SHC4Q6S5L8 630 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms