RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 SNX5Q9Y5X3 404 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 NBPF26B4DH59 902 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 G3V3G9 751 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 BAIAP3O94812 1187 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 SETSIPP0DME0 302 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 CASP7P55210 303 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 ADCY1Q08828 1119 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 RPAP2Q8IXW5 612 aaPredicted RBP12.26□□□□□ -0.45
UBFD1-205ENST00000566136 STON2Q8WXE9 905 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 ZMAT2Q96NC0 199 aaKnown RBP12.26□□□□□ -0.45
UBFD1-205ENST00000566136 KLHL11Q9NVR0 708 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 RNF40O75150 1001 aa12.25□□□□□ -0.45
UBFD1-205ENST00000566136 IRX5P78411 483 aaPredicted RBP12.25□□□□□ -0.45
UBFD1-205ENST00000566136 MTA1Q13330 715 aa12.25□□□□□ -0.45
UBFD1-205ENST00000566136 TNNI3KQ59H18 835 aa12.25□□□□□ -0.45
UBFD1-205ENST00000566136 ZBTB33Q86T24 672 aa12.25□□□□□ -0.45
UBFD1-205ENST00000566136 CLIP3Q96DZ5 547 aa12.25□□□□□ -0.45
UBFD1-205ENST00000566136 TTC14Q96N46 770 aa12.25□□□□□ -0.45
UBFD1-205ENST00000566136 ZCCHC17Q9NP64 241 aaKnown RBP12.25□□□□□ -0.45
UBFD1-205ENST00000566136 KPNA6O60684 536 aa12.25□□□□□ -0.45
UBFD1-205ENST00000566136 HMMRO75330 724 aa12.25□□□□□ -0.45
UBFD1-205ENST00000566136 CCT6BQ92526 530 aa12.25□□□□□ -0.45
UBFD1-205ENST00000566136 NT5C1AQ9BXI3 368 aa12.25□□□□□ -0.45
UBFD1-205ENST00000566136 CRTAC1Q9NQ79 661 aa12.25□□□□□ -0.45
UBFD1-205ENST00000566136 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.25□□□□□ -0.45
UBFD1-205ENST00000566136 M0R3H8 397 aa12.24□□□□□ -0.45
UBFD1-205ENST00000566136 HTATSF1O43719 755 aaKnown RBP12.24□□□□□ -0.45
UBFD1-205ENST00000566136 RFPL1O75677 317 aa12.24□□□□□ -0.45
UBFD1-205ENST00000566136 USP14P54578 494 aa12.24□□□□□ -0.45
UBFD1-205ENST00000566136 EIF6P56537 245 aaKnown RBP12.24□□□□□ -0.45
UBFD1-205ENST00000566136 LLGL1Q15334 1064 aa12.24□□□□□ -0.45
UBFD1-205ENST00000566136 SYDE2Q5VT97 1194 aa12.24□□□□□ -0.45
UBFD1-205ENST00000566136 CEP131Q9UPN4 1083 aa12.24□□□□□ -0.45
UBFD1-205ENST00000566136 LOC102724428A0A0B4J2F2 783 aa12.23□□□□□ -0.45
UBFD1-205ENST00000566136 NEMP1O14524 444 aa12.23□□□□□ -0.45
UBFD1-205ENST00000566136 SIK1P57059 783 aa12.23□□□□□ -0.45
UBFD1-205ENST00000566136 DGKZQ13574 1117 aa12.23□□□□□ -0.45
UBFD1-205ENST00000566136 TTC22Q5TAA0 569 aa12.23□□□□□ -0.45
UBFD1-205ENST00000566136 UBE2Q1Q7Z7E8 422 aa12.23□□□□□ -0.45
UBFD1-205ENST00000566136 TBK1Q9UHD2 729 aa12.23□□□□□ -0.45
UBFD1-205ENST00000566136 MYBL2P10244 700 aa12.23□□□□□ -0.45
UBFD1-205ENST00000566136 ATP6V1AP38606 617 aa12.23□□□□□ -0.45
UBFD1-205ENST00000566136 CCT4P50991 539 aaKnown RBP12.23□□□□□ -0.45
UBFD1-205ENST00000566136 TAF7Q15545 349 aaPredicted RBP12.23□□□□□ -0.45
UBFD1-205ENST00000566136 FAM133BQ5BKY9 247 aaKnown RBP12.23□□□□□ -0.45
UBFD1-205ENST00000566136 TMEM67Q5HYA8 995 aa12.23□□□□□ -0.45
UBFD1-205ENST00000566136 FAM209AQ5JX71 171 aa12.23□□□□□ -0.45
UBFD1-205ENST00000566136 CCDC30Q5VVM6 783 aa12.23□□□□□ -0.45
UBFD1-205ENST00000566136 FAM186BQ8IYM0 893 aa12.23□□□□□ -0.45
UBFD1-205ENST00000566136 RBM42Q9BTD8 480 aaKnown RBP12.23□□□□□ -0.45
UBFD1-205ENST00000566136 LGR4Q9BXB1 951 aa12.23□□□□□ -0.45
UBFD1-205ENST00000566136 ZNF652Q9Y2D9 606 aa12.23□□□□□ -0.45
UBFD1-205ENST00000566136 TISP43B9A030 160 aa12.22□□□□□ -0.45
UBFD1-205ENST00000566136 B9A039 149 aa12.22□□□□□ -0.45
UBFD1-205ENST00000566136 ZNF267Q14586 743 aaPredicted RBP12.22□□□□□ -0.45
UBFD1-205ENST00000566136 TXNRD1Q16881 649 aa12.22□□□□□ -0.45
UBFD1-205ENST00000566136 DACT2Q5SW24 774 aa12.22□□□□□ -0.45
UBFD1-205ENST00000566136 KIAA0319Q5VV43 1072 aa12.22□□□□□ -0.45
UBFD1-205ENST00000566136 GK5Q6ZS86 529 aa12.22□□□□□ -0.45
UBFD1-205ENST00000566136 DDX54Q8TDD1 881 aaKnown RBP12.22□□□□□ -0.45
UBFD1-205ENST00000566136 KIF2CQ99661 725 aa12.22□□□□□ -0.45
UBFD1-205ENST00000566136 FAM208AQ9UK61 1670 aaKnown RBP12.22□□□□□ -0.45
UBFD1-205ENST00000566136 RGPD3A6NKT7 1758 aaPredicted RBP12.22□□□□□ -0.45
UBFD1-205ENST00000566136 RGPD4Q7Z3J3 1758 aa12.22□□□□□ -0.45
UBFD1-205ENST00000566136 GALNSP34059 522 aa12.22□□□□□ -0.45
UBFD1-205ENST00000566136 GIPRP48546 466 aa12.22□□□□□ -0.45
UBFD1-205ENST00000566136 TNIP3Q96KP6 325 aa12.22□□□□□ -0.45
UBFD1-205ENST00000566136 FERD3LQ96RJ6 166 aa12.22□□□□□ -0.45
UBFD1-205ENST00000566136 SEPT9Q9UHD8 586 aaPredicted RBP12.22□□□□□ -0.45
UBFD1-205ENST00000566136 JAG2Q9Y219 1238 aa12.22□□□□□ -0.45
UBFD1-205ENST00000566136 RGPD2P0DJD1 1756 aa12.22□□□□□ -0.45
UBFD1-205ENST00000566136 LRRC10BA6NIK2 292 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 GREM1O60565 184 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 CD2BP2O95400 341 aaKnown RBP12.21□□□□□ -0.45
UBFD1-205ENST00000566136 CPP00450 1065 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 CELA3AP09093 270 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 NUDT7P0C024 238 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 ALDH5A1P51649 535 aaPredicted RBP12.21□□□□□ -0.45
UBFD1-205ENST00000566136 USP4Q13107 963 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 PCBP2Q15366 365 aaKnown RBP eCLIP12.21□□□□□ -0.45
UBFD1-205ENST00000566136 UNC5DQ6UXZ4 953 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 RTL10Q7L3V2 364 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 CBARPQ8N350 705 aaPredicted RBP12.21□□□□□ -0.45
UBFD1-205ENST00000566136 C3orf58Q8NDZ4 430 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 EFCC1Q9HA90 598 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 PDLIM7Q9NR12 457 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 GGA3Q9NZ52 723 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 ROR1Q01973 937 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 CTC1Q2NKJ3 1217 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 LSRQ86X29 649 aaPredicted RBP12.21□□□□□ -0.45
UBFD1-205ENST00000566136 MYCT1Q8N699 235 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 ZSWIM2Q8NEG5 633 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 CDK5RAP3Q96JB5 506 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 PCDHB10Q9UN67 800 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 MAPRE3Q9UPY8 281 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 EXOC6BQ9Y2D4 811 aa12.21□□□□□ -0.45
UBFD1-205ENST00000566136 SERTM1A2A2V5 107 aa12.2□□□□□ -0.46
UBFD1-205ENST00000566136 FAM86C2PA6NEL3 165 aa12.2□□□□□ -0.46
UBFD1-205ENST00000566136 GNAI2P04899 355 aa12.2□□□□□ -0.46
UBFD1-205ENST00000566136 ATP1A3P13637 1013 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms