RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 ATP13A1Q9HD20 1204 aa5.85□□□□□ -1.47
LINC00561-201ENST00000565815 TMEM260Q9NX78 707 aa5.85□□□□□ -1.47
LINC00561-201ENST00000565815 ZC3H7BQ9UGR2 993 aaKnown RBP5.85□□□□□ -1.47
LINC00561-201ENST00000565815 AKT3Q9Y243 479 aa5.85□□□□□ -1.47
LINC00561-201ENST00000565815 TRAF6Q9Y4K3 522 aa5.85□□□□□ -1.47
LINC00561-201ENST00000565815 MAP3K1Q13233 1512 aa5.84□□□□□ -1.47
LINC00561-201ENST00000565815 IRS4O14654 1257 aaPredicted RBP5.84□□□□□ -1.47
LINC00561-201ENST00000565815 CDC45O75419 566 aa5.84□□□□□ -1.47
LINC00561-201ENST00000565815 BVESQ8NE79 360 aa5.84□□□□□ -1.47
LINC00561-201ENST00000565815 ZSWIM5Q9P217 1185 aa5.84□□□□□ -1.47
LINC00561-201ENST00000565815 TMEFF2Q9UIK5 374 aaPredicted RBP5.84□□□□□ -1.47
LINC00561-201ENST00000565815 COL16A1Q07092 1604 aaPredicted RBP5.84□□□□□ -1.47
LINC00561-201ENST00000565815 KANK1Q14678 1352 aa5.84□□□□□ -1.47
LINC00561-201ENST00000565815 DYRK3O43781 588 aa5.84□□□□□ -1.47
LINC00561-201ENST00000565815 MED26O95402 600 aa5.84□□□□□ -1.47
LINC00561-201ENST00000565815 FSTP19883 344 aa5.84□□□□□ -1.47
LINC00561-201ENST00000565815 RBM6P78332 1123 aaKnown RBP5.84□□□□□ -1.47
LINC00561-201ENST00000565815 MBLAC2Q68D91 279 aa5.84□□□□□ -1.47
LINC00561-201ENST00000565815 TMEM145Q8NBT3 493 aa5.84□□□□□ -1.47
LINC00561-201ENST00000565815 PRDM7Q9NQW5 492 aa5.84□□□□□ -1.47
LINC00561-201ENST00000565815 MROH1Q8NDA8 1641 aa5.84□□□□□ -1.48
LINC00561-201ENST00000565815 PRR19A6NJB7 356 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 ETV3P41162 512 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 ZNF574Q6ZN55 896 aaPredicted RBP5.83□□□□□ -1.48
LINC00561-201ENST00000565815 TMEM151AQ8N4L1 468 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 ZBTB38Q8NAP3 1195 aaPredicted RBP5.83□□□□□ -1.48
LINC00561-201ENST00000565815 MRGPRX3Q96LB0 322 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 DSCC1Q9BVC3 393 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 WHRNQ9P202 907 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 EMC9Q9Y3B6 208 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 DUOX2Q9NRD8 1548 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 DCCP43146 1447 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 PRODHO43272 600 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 CAPNS1P04632 268 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 CENPBP07199 599 aaPredicted RBP5.83□□□□□ -1.48
LINC00561-201ENST00000565815 CD3EP07766 207 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 ZNF865P0CJ78 1059 aaPredicted RBP5.83□□□□□ -1.48
LINC00561-201ENST00000565815 NTRK3Q16288 839 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 BBS9Q3SYG4 887 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 GTF2IRD2BQ6EKJ0 949 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 GTF2IRD2Q86UP8 949 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 CCDC103Q8IW40 242 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 OSBP2Q969R2 916 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 ASPNQ9BXN1 380 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 CHST7Q9NS84 486 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 DIP2AQ14689 1571 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 EFCAB6Q5THR3 1501 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 TET3O43151 1660 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 SIGLEC6O43699 453 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 SCRN1Q12765 414 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 PRSS36Q5K4E3 855 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.83□□□□□ -1.48
LINC00561-201ENST00000565815 UBE2FQ969M7 185 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 C1orf159Q96HA4 380 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 DBNDD2Q9BQY9 259 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 FOXP3Q9BZS1 431 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 EBF1Q9UH73 591 aa5.83□□□□□ -1.48
LINC00561-201ENST00000565815 LMTK2Q8IWU2 1503 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 CEACAM5P06731 702 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 C6orf222P0C671 652 aaPredicted RBP5.82□□□□□ -1.48
LINC00561-201ENST00000565815 BNIP3Q12983 259 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 TRIM59Q8IWR1 403 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 JMYQ8N9B5 988 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 THAP3Q8WTV1 239 aaPredicted RBP5.82□□□□□ -1.48
LINC00561-201ENST00000565815 TCTN2Q96GX1 697 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 FCRL3Q96P31 734 aaPredicted RBP5.82□□□□□ -1.48
LINC00561-201ENST00000565815 OSBPL1AQ9BXW6 950 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 AP5S1Q9NUS5 200 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 SLC52A1Q9NWF4 448 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 FBXL7Q9UJT9 491 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 MRPS23Q9Y3D9 190 aaKnown RBP5.82□□□□□ -1.48
LINC00561-201ENST00000565815 DLX3O60479 287 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 IGLV1-40P01703 118 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 ITGA4P13612 1032 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 LCP1P13796 627 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 ECI1P42126 302 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 FGD2Q7Z6J4 655 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 ALYREFQ86V81 257 aaKnown RBP5.82□□□□□ -1.48
LINC00561-201ENST00000565815 ARHGEF39Q8N4T4 335 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 UBR7Q8N806 425 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 APBA2Q99767 749 aa5.82□□□□□ -1.48
LINC00561-201ENST00000565815 ERBINQ96RT1 1412 aa5.81□□□□□ -1.48
LINC00561-201ENST00000565815 SETD5Q9C0A6 1442 aa5.81□□□□□ -1.48
LINC00561-201ENST00000565815 FAM155AB1AL88 458 aaPredicted RBP5.81□□□□□ -1.48
LINC00561-201ENST00000565815 PPM1BO75688 479 aa5.81□□□□□ -1.48
LINC00561-201ENST00000565815 LTKP29376 864 aa5.81□□□□□ -1.48
LINC00561-201ENST00000565815 ZNF460Q14592 562 aa5.81□□□□□ -1.48
LINC00561-201ENST00000565815 KIR3DS1Q14943 382 aa5.81□□□□□ -1.48
LINC00561-201ENST00000565815 DALRD3Q5D0E6 543 aaKnown RBP5.81□□□□□ -1.48
LINC00561-201ENST00000565815 KCNT2Q6UVM3 1135 aa5.81□□□□□ -1.48
LINC00561-201ENST00000565815 KISS1RQ969F8 398 aaPredicted RBP5.81□□□□□ -1.48
LINC00561-201ENST00000565815 PLEKHG1Q9ULL1 1385 aa5.81□□□□□ -1.48
LINC00561-201ENST00000565815 ENPP3O14638 875 aa5.81□□□□□ -1.48
LINC00561-201ENST00000565815 EFEMP2O95967 443 aa5.81□□□□□ -1.48
LINC00561-201ENST00000565815 THBDP07204 575 aa5.81□□□□□ -1.48
LINC00561-201ENST00000565815 SRFP11831 508 aa5.81□□□□□ -1.48
LINC00561-201ENST00000565815 ANKRD39Q53RE8 183 aa5.81□□□□□ -1.48
LINC00561-201ENST00000565815 WFDC3Q8IUB2 231 aa5.81□□□□□ -1.48
LINC00561-201ENST00000565815 DHX37Q8IY37 1157 aaKnown RBP5.81□□□□□ -1.48
LINC00561-201ENST00000565815 AARSD1Q9BTE6 412 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 801.9 ms