RNA–Protein interactions for RNA: ENST00000565481.5

KIFC3-222, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-222	ENST00000565481	CPVL	Q9H3G5	476 aa		13.63	□□□□□ -0.23
KIFC3-222	ENST00000565481	TBX21	Q9UL17	535 aa		13.63	□□□□□ -0.23
KIFC3-222	ENST00000565481		A0A0C4DFX4	3053 aa		13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481		A0A0U1RQG5	324 aa	Predicted RBP	13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481	PTPDC1	A2A3K4	754 aa		13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481	ARVCF	O00192	962 aa		13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481	SGSM2	O43147	1006 aa		13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481	CYP21A2	P08686	494 aa		13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481	BEX3	Q00994	111 aa		13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481	SHH	Q15465	462 aa		13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481	CDC37	Q16543	378 aa	Predicted RBP	13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481	FSCN1	Q16658	493 aa	Known RBP	13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481	DUSP28	Q4G0W2	176 aa		13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481	C9orf50	Q5SZB4	431 aa		13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481	TMEM63B	Q5T3F8	832 aa		13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481	CYB5R4	Q7L1T6	521 aa		13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481	ADGRF4	Q8IZF3	695 aa		13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481	DNER	Q8NFT8	737 aa		13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481	UBAC1	Q9BSL1	405 aa		13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481	MYH7B	A7E2Y1	1941 aa		13.62	□□□□□ -0.23
KIFC3-222	ENST00000565481	CABYR	O75952	493 aa		13.61	□□□□□ -0.23
KIFC3-222	ENST00000565481	PARP1	P09874	1014 aa	Known RBP	13.61	□□□□□ -0.23
KIFC3-222	ENST00000565481	PTGS1	P23219	599 aa		13.61	□□□□□ -0.23
KIFC3-222	ENST00000565481	CALML3	P27482	149 aa		13.61	□□□□□ -0.23
KIFC3-222	ENST00000565481	NOL8	Q76FK4	1167 aa	Known RBP	13.61	□□□□□ -0.23
KIFC3-222	ENST00000565481	EEPD1	Q7L9B9	569 aa		13.61	□□□□□ -0.23
KIFC3-222	ENST00000565481	FAM126B	Q8IXS8	530 aa		13.61	□□□□□ -0.23
KIFC3-222	ENST00000565481	DEFB123	Q8N688	67 aa		13.61	□□□□□ -0.23
KIFC3-222	ENST00000565481	AP5M1	Q9H0R1	490 aa		13.61	□□□□□ -0.23
KIFC3-222	ENST00000565481	JMJD4	Q9H9V9	463 aa		13.61	□□□□□ -0.23
KIFC3-222	ENST00000565481	TMEM39A	Q9NV64	488 aa		13.61	□□□□□ -0.23
KIFC3-222	ENST00000565481		U3KPZ7	1027 aa	Predicted RBP	13.61	□□□□□ -0.23
KIFC3-222	ENST00000565481	ABCB11	O95342	1321 aa		13.61	□□□□□ -0.23
KIFC3-222	ENST00000565481	DYNC1LI2	O43237	492 aa	Predicted RBP	13.6	□□□□□ -0.23
KIFC3-222	ENST00000565481	TIMP1	P01033	207 aa		13.6	□□□□□ -0.23
KIFC3-222	ENST00000565481	CD4	P01730	458 aa		13.6	□□□□□ -0.23
KIFC3-222	ENST00000565481	RAG1	P15918	1043 aa		13.6	□□□□□ -0.23
KIFC3-222	ENST00000565481	EPHB4	P54760	987 aa		13.6	□□□□□ -0.23
KIFC3-222	ENST00000565481	QRICH1	Q2TAL8	776 aa		13.6	□□□□□ -0.23
KIFC3-222	ENST00000565481	USH1G	Q495M9	461 aa		13.6	□□□□□ -0.23
KIFC3-222	ENST00000565481	IFIT1B	Q5T764	474 aa	Known RBP	13.6	□□□□□ -0.23
KIFC3-222	ENST00000565481	CXCL17	Q6UXB2	119 aa		13.6	□□□□□ -0.23
KIFC3-222	ENST00000565481	KIAA1211	Q6ZU35	1233 aa		13.6	□□□□□ -0.23
KIFC3-222	ENST00000565481		Q7L0L9	218 aa		13.6	□□□□□ -0.23
KIFC3-222	ENST00000565481	MAP4K1	Q92918	833 aa		13.6	□□□□□ -0.23
KIFC3-222	ENST00000565481	MTMR8	Q96EF0	704 aa		13.6	□□□□□ -0.23
KIFC3-222	ENST00000565481	SEZ6L	Q9BYH1	1024 aa		13.6	□□□□□ -0.23
KIFC3-222	ENST00000565481	MTMR10	Q9NXD2	777 aa		13.6	□□□□□ -0.23
KIFC3-222	ENST00000565481	TAF6L	Q9Y6J9	622 aa		13.6	□□□□□ -0.23
KIFC3-222	ENST00000565481	GRIN2D	O15399	1336 aa		13.6	□□□□□ -0.23
KIFC3-222	ENST00000565481	CHD9	Q3L8U1	2897 aa		13.59	□□□□□ -0.23
KIFC3-222	ENST00000565481	PALM3	A6NDB9	673 aa	Predicted RBP	13.59	□□□□□ -0.23
KIFC3-222	ENST00000565481	ZEB2	O60315	1214 aa		13.59	□□□□□ -0.23
KIFC3-222	ENST00000565481	GHRHR	Q02643	423 aa		13.59	□□□□□ -0.23
KIFC3-222	ENST00000565481	FPGS	Q05932	587 aa		13.59	□□□□□ -0.23
KIFC3-222	ENST00000565481	STOX1	Q6ZVD7	989 aa		13.59	□□□□□ -0.23
KIFC3-222	ENST00000565481	STAG2	Q8N3U4	1231 aa		13.59	□□□□□ -0.23
KIFC3-222	ENST00000565481	MPHOSPH6	Q99547	160 aa	Known RBP	13.59	□□□□□ -0.23
KIFC3-222	ENST00000565481	WDR11	Q9BZH6	1224 aa		13.59	□□□□□ -0.23
KIFC3-222	ENST00000565481	MAD2L2	Q9UI95	211 aa		13.59	□□□□□ -0.23
KIFC3-222	ENST00000565481	MYO9B	Q13459	2157 aa		13.59	□□□□□ -0.23
KIFC3-222	ENST00000565481	UNC80	Q8N2C7	3258 aa		13.59	□□□□□ -0.23
KIFC3-222	ENST00000565481	GBF1	Q92538	1859 aa		13.59	□□□□□ -0.23
KIFC3-222	ENST00000565481	KLRF2	D3W0D1	207 aa		13.58	□□□□□ -0.24
KIFC3-222	ENST00000565481		E7EWF7	191 aa		13.58	□□□□□ -0.24
KIFC3-222	ENST00000565481	NKRF	O15226	690 aa	Known RBP eCLIP	13.58	□□□□□ -0.24	1e-6	■□□□□ 9.3
KIFC3-222	ENST00000565481	PDE4D	Q08499	809 aa		13.58	□□□□□ -0.24
KIFC3-222	ENST00000565481	TRDN	Q13061	729 aa		13.58	□□□□□ -0.24
KIFC3-222	ENST00000565481	SLC35G1	Q2M3R5	365 aa		13.58	□□□□□ -0.24
KIFC3-222	ENST00000565481	MFSD5	Q6N075	450 aa		13.58	□□□□□ -0.24
KIFC3-222	ENST00000565481	FBXO11	Q86XK2	927 aa		13.58	□□□□□ -0.24
KIFC3-222	ENST00000565481	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.58	□□□□□ -0.24
KIFC3-222	ENST00000565481	SCFD2	Q8WU76	684 aa		13.58	□□□□□ -0.24
KIFC3-222	ENST00000565481	TBC1D5	Q92609	795 aa		13.58	□□□□□ -0.24
KIFC3-222	ENST00000565481	VTI1A	Q96AJ9	217 aa		13.58	□□□□□ -0.24
KIFC3-222	ENST00000565481	COL20A1	Q9P218	1284 aa		13.58	□□□□□ -0.24
KIFC3-222	ENST00000565481	EYS	Q5T1H1	3165 aa		13.58	□□□□□ -0.24
KIFC3-222	ENST00000565481	TANC1	Q9C0D5	1861 aa		13.57	□□□□□ -0.24
KIFC3-222	ENST00000565481		B4DLN1	442 aa		13.57	□□□□□ -0.24
KIFC3-222	ENST00000565481	OPLAH	O14841	1288 aa		13.57	□□□□□ -0.24
KIFC3-222	ENST00000565481	TLR3	O15455	904 aa	Known RBP	13.57	□□□□□ -0.24
KIFC3-222	ENST00000565481	MRPL12	P52815	198 aa	Known RBP	13.57	□□□□□ -0.24
KIFC3-222	ENST00000565481	ANTXR2	P58335	489 aa		13.57	□□□□□ -0.24
KIFC3-222	ENST00000565481	SMAD3	P84022	425 aa	Known RBP	13.57	□□□□□ -0.24
KIFC3-222	ENST00000565481	TROAP	Q12815	778 aa		13.57	□□□□□ -0.24
KIFC3-222	ENST00000565481	ITGA7	Q13683	1181 aa		13.57	□□□□□ -0.24
KIFC3-222	ENST00000565481	GRM4	Q14833	912 aa		13.57	□□□□□ -0.24
KIFC3-222	ENST00000565481	MCF2L2	Q86YR7	1114 aa		13.57	□□□□□ -0.24
KIFC3-222	ENST00000565481	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.57	□□□□□ -0.24
KIFC3-222	ENST00000565481	NCOA7	Q8NI08	942 aa		13.57	□□□□□ -0.24
KIFC3-222	ENST00000565481	SENP2	Q9HC62	589 aa		13.57	□□□□□ -0.24
KIFC3-222	ENST00000565481	MRPL11	Q9Y3B7	192 aa	Known RBP	13.57	□□□□□ -0.24
KIFC3-222	ENST00000565481	TRIP12	Q14669	1992 aa	Predicted RBP	13.57	□□□□□ -0.24
KIFC3-222	ENST00000565481	SCN5A	Q14524	2016 aa		13.56	□□□□□ -0.24
KIFC3-222	ENST00000565481		A6NJR5	290 aa		13.56	□□□□□ -0.24
KIFC3-222	ENST00000565481	ZBTB5	O15062	677 aa		13.56	□□□□□ -0.24
KIFC3-222	ENST00000565481	DHX16	O60231	1041 aa	Known RBP	13.56	□□□□□ -0.24
KIFC3-222	ENST00000565481	PPP1R11	O60927	126 aa	Predicted RBP	13.56	□□□□□ -0.24
KIFC3-222	ENST00000565481	CPT1A	P50416	773 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms