RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	ALAS1	P13196	640 aa		11.27	□□□□□ -0.61
SIN3A-205	ENST00000564778	TRAPPC10	P48553	1259 aa		11.27	□□□□□ -0.61
SIN3A-205	ENST00000564778	ERVK-9	P63128	1117 aa		11.27	□□□□□ -0.61
SIN3A-205	ENST00000564778	ERVK-24	P63145	666 aa		11.27	□□□□□ -0.61
SIN3A-205	ENST00000564778	GNL2	Q13823	731 aa	Known RBP	11.27	□□□□□ -0.61
SIN3A-205	ENST00000564778	FAM110C	Q1W6H9	321 aa		11.27	□□□□□ -0.61
SIN3A-205	ENST00000564778	ATL3	Q6DD88	541 aa		11.27	□□□□□ -0.61
SIN3A-205	ENST00000564778	TNS4	Q8IZW8	715 aa		11.27	□□□□□ -0.61
SIN3A-205	ENST00000564778	RASGRP4	Q8TDF6	673 aa		11.27	□□□□□ -0.61
SIN3A-205	ENST00000564778	TRERF1	Q96PN7	1200 aa		11.27	□□□□□ -0.61
SIN3A-205	ENST00000564778	ZIC5	Q96T25	663 aa		11.27	□□□□□ -0.61
SIN3A-205	ENST00000564778	ACAD9	Q9H845	621 aa		11.27	□□□□□ -0.61
SIN3A-205	ENST00000564778	SAGE1	Q9NXZ1	904 aa		11.27	□□□□□ -0.61
SIN3A-205	ENST00000564778	FBXO40	Q9UH90	709 aa		11.27	□□□□□ -0.61
SIN3A-205	ENST00000564778	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.26	□□□□□ -0.61
SIN3A-205	ENST00000564778	ALDH1A1	P00352	501 aa		11.26	□□□□□ -0.61
SIN3A-205	ENST00000564778	FOS	P01100	380 aa	Predicted RBP	11.26	□□□□□ -0.61
SIN3A-205	ENST00000564778	POLR2M	P0CAP2	368 aa		11.26	□□□□□ -0.61
SIN3A-205	ENST00000564778	BCR	P11274	1271 aa		11.26	□□□□□ -0.61
SIN3A-205	ENST00000564778	TAF1C	Q15572	869 aa	Predicted RBP	11.26	□□□□□ -0.61
SIN3A-205	ENST00000564778	UBE2S	Q16763	222 aa		11.26	□□□□□ -0.61
SIN3A-205	ENST00000564778	RILPL1	Q5EBL4	403 aa		11.26	□□□□□ -0.61
SIN3A-205	ENST00000564778	MUM1L1	Q5H9M0	696 aa		11.26	□□□□□ -0.61
SIN3A-205	ENST00000564778	EARS2	Q5JPH6	523 aa	Known RBP	11.26	□□□□□ -0.61
SIN3A-205	ENST00000564778	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.26	□□□□□ -0.61
SIN3A-205	ENST00000564778	GPRC5A	Q8NFJ5	357 aa		11.26	□□□□□ -0.61
SIN3A-205	ENST00000564778	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.26	□□□□□ -0.61
SIN3A-205	ENST00000564778	PAGR1	Q9BTK6	254 aa		11.26	□□□□□ -0.61
SIN3A-205	ENST00000564778	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.26	□□□□□ -0.61
SIN3A-205	ENST00000564778	LCT	P09848	1927 aa		11.26	□□□□□ -0.61
SIN3A-205	ENST00000564778	FRMPD4	Q14CM0	1322 aa		11.26	□□□□□ -0.61
SIN3A-205	ENST00000564778	ZNF236	Q9UL36	1845 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	CCDC194	A0A1B0GVG4	234 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	FAM205C	A6NFA0	338 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	TLR2	O60603	784 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	ERCC3	P19447	782 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	CCNA1	P78396	465 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	PLS1	Q14651	629 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	NONO	Q15233	471 aa	Known RBP eCLIP	11.25	□□□□□ -0.61	5e-7	■■■■■ 27.1
SIN3A-205	ENST00000564778	NOM1	Q5C9Z4	860 aa	Known RBP	11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	USP17L6P	Q6QN14	398 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	PIK3AP1	Q6ZUJ8	805 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	CRYGN	Q8WXF5	182 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	CFHR5	Q9BXR6	569 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	ANO3	Q9BYT9	981 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	MROH8	Q9H579	483 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	A1CF	Q9NQ94	594 aa	Known RBP	11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	HOMER2	Q9NSB8	354 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	POLR3E	Q9NVU0	708 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	BIN2	Q9UBW5	565 aa	Predicted RBP	11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	NOL7	Q9UMY1	257 aa	Known RBP	11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	PFAS	O15067	1338 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	RPTOR	Q8N122	1335 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	MYH7B	A7E2Y1	1941 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	TCHH	Q07283	1943 aa		11.25	□□□□□ -0.61
SIN3A-205	ENST00000564778	SPDYE3	A6NKU9	549 aa		11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	PEX10	O60683	326 aa		11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	BAG4	O95429	457 aa	Known RBP	11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	CFB	P00751	764 aa		11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	HOXA13	P31271	388 aa	Predicted RBP	11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	SREBF1	P36956	1147 aa		11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	NASP	P49321	788 aa	Predicted RBP	11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	TOB1	P50616	345 aa	Predicted RBP	11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	RPS6	P62753	249 aa	Known RBP	11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	CRHR2	Q13324	411 aa		11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	ORC2	Q13416	577 aa	Predicted RBP	11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778		Q3C1V9	767 aa		11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	JAKMIP3	Q5VZ66	844 aa		11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	FAM173B	Q6P4H8	233 aa		11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	C17orf99	Q6UX52	265 aa		11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	SLC30A10	Q6XR72	485 aa		11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	RNF207	Q6ZRF8	634 aa		11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	ANKRD13C	Q8N6S4	541 aa		11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	ZNF396	Q96N95	335 aa	Predicted RBP	11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	GBP4	Q96PP9	640 aa		11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	ZFYVE28	Q9HCC9	887 aa		11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	TMEM260	Q9NX78	707 aa		11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	CYP39A1	Q9NYL5	469 aa		11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	COL20A1	Q9P218	1284 aa		11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	TSKS	Q9UJT2	592 aa		11.24	□□□□□ -0.61
SIN3A-205	ENST00000564778	KRT85	P78386	507 aa		11.23	□□□□□ -0.61
SIN3A-205	ENST00000564778	DNM1	Q05193	864 aa	Known RBP	11.23	□□□□□ -0.61
SIN3A-205	ENST00000564778	INF2	Q27J81	1249 aa		11.23	□□□□□ -0.61
SIN3A-205	ENST00000564778	MOXD1	Q6UVY6	613 aa		11.23	□□□□□ -0.61
SIN3A-205	ENST00000564778	NSMF	Q6X4W1	530 aa		11.23	□□□□□ -0.61
SIN3A-205	ENST00000564778	NEK8	Q86SG6	692 aa		11.23	□□□□□ -0.61
SIN3A-205	ENST00000564778	NCAPG2	Q86XI2	1143 aa		11.23	□□□□□ -0.61
SIN3A-205	ENST00000564778	ABRA	Q8N0Z2	381 aa		11.23	□□□□□ -0.61
SIN3A-205	ENST00000564778	TMEM87A	Q8NBN3	555 aa		11.23	□□□□□ -0.61
SIN3A-205	ENST00000564778	TBCK	Q8TEA7	893 aa		11.23	□□□□□ -0.61
SIN3A-205	ENST00000564778	TBC1D5	Q92609	795 aa		11.23	□□□□□ -0.61
SIN3A-205	ENST00000564778	USP28	Q96RU2	1077 aa		11.23	□□□□□ -0.61
SIN3A-205	ENST00000564778	PORCN	Q9H237	461 aa		11.23	□□□□□ -0.61
SIN3A-205	ENST00000564778	RNF186	Q9NXI6	227 aa		11.23	□□□□□ -0.61
SIN3A-205	ENST00000564778	RTEL1	Q9NZ71	1219 aa		11.23	□□□□□ -0.61
SIN3A-205	ENST00000564778	PLXNB2	O15031	1838 aa		11.23	□□□□□ -0.61
SIN3A-205	ENST00000564778	WNT7A	O00755	349 aa		11.22	□□□□□ -0.61
SIN3A-205	ENST00000564778	EDIL3	O43854	480 aa		11.22	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms