RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 TMEM47Q9BQJ4 181 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SPZ1Q9BXG8 430 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ZFYVE28Q9HCC9 887 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SAGE1Q9NXZ1 904 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 KIAA1468Q9P260 1216 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 FBXO2Q9UK22 296 aaPredicted RBP8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 KCNH3Q9ULD8 1083 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 AGTPBP1Q9UPW5 1226 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PCDHB6Q9Y5E3 794 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 A0A1W2PRG0 241 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ECM2O94769 699 aaPredicted RBP8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PARP1P09874 1014 aaKnown RBP8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 EEF2P13639 858 aaKnown RBP8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ATP2B1P20020 1258 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 USP14P54578 494 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 TPM4P67936 248 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 IRX3P78415 501 aaPredicted RBP8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PABPC4Q13310 644 aaKnown RBP eCLIP8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CRHR2Q13324 411 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 MOGSQ13724 837 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SH3D19Q5HYK7 790 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 GALNT17Q6IS24 598 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 GPAT2Q6NUI2 795 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 KRBA2Q6ZNG9 492 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 DAGLBQ8NCG7 672 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PROCA1Q8NCQ7 364 aaPredicted RBP8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CCDC12Q8WUD4 166 aaPredicted RBP8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PIBF1Q8WXW3 757 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 TNFRSF25Q93038 417 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 FERMT2Q96AC1 680 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SHISA4Q96DD7 197 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CEP95Q96GE4 821 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CLIC6Q96NY7 704 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 TRIM5Q9C035 493 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 R3HDMLQ9H3Y0 253 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SH2D4AQ9H788 454 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 KANSL2Q9H9L4 492 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CLIP2Q9UDT6 1046 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 MAD2L2Q9UI95 211 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 MTMR7Q9Y216 660 aa8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SRPRBQ9Y5M8 271 aaKnown RBP8.45□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CCDC194A0A1B0GVG4 234 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PALM3A6NDB9 673 aaPredicted RBP8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 FAM205CA6NFA0 338 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 KLRF2D3W0D1 207 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 hCG_1984214I3L0E3 225 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CYP2C8P10632 490 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 OSBPP22059 807 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SMARCA1P28370 1054 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ZNF75DP51815 510 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 NLRP12P59046 1061 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 IQCB1Q15051 598 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 NPY5RQ15761 445 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ASPRV1Q53RT3 343 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 KANK3Q6NY19 840 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ELOA2Q8IYF1 753 aaPredicted RBP8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 BLIDQ8IZY5 108 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SPICE1Q8N0Z3 855 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 LRRC47Q8N1G4 583 aaKnown RBP8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 STAG2Q8N3U4 1231 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 AOPEPQ8N6M6 819 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ZNF713Q8N859 430 aaPredicted RBP8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CNNM3Q8NE01 707 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SMCR8Q8TEV9 937 aaPredicted RBP8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 GPKOWQ92917 476 aaPredicted RBP eCLIP8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 RRP36Q96EU6 259 aaKnown RBP8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PARK7Q99497 189 aaKnown RBP8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 BPIFA3Q9BQP9 254 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 TANGO6Q9C0B7 1094 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 KIAA1683Q9H0B3 1180 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 RPAP3Q9H6T3 665 aaPredicted RBP8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 GOPCQ9HD26 462 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 EMILIN3Q9NT22 766 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SEC63Q9UGP8 760 aaKnown RBP8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PNMA3Q9UL41 463 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PCDHA4Q9UN74 947 aa8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 COLQQ9Y215 455 aaPredicted RBP8.44□□□□□ -1.06
MAP1LC3B-205ENST00000564638 IGKV6D-41A0A0C4DH26 115 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SMTNL1A8MU46 457 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 GPR25O00155 361 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 TTLL1O95922 423 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 VCAM1P19320 739 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CDC25BP30305 580 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 NOVP48745 357 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 NAPAP54920 295 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ATP2C1P98194 919 aaPredicted RBP8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CACNB1Q02641 598 aaPredicted RBP8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 WWC2Q6AWC2 1192 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SARM1Q6SZW1 724 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PIK3AP1Q6ZUJ8 805 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 HEATR3Q7Z4Q2 680 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CTU1Q7Z7A3 348 aaKnown RBP8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SIAH1Q8IUQ4 282 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 DRC7Q8IY82 874 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 C12orf42Q96LP6 360 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PYM1Q9BRP8 204 aaKnown RBP8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ASCC2Q9H1I8 757 aaPredicted RBP8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 VCPKMTQ9H867 229 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ZCCHC17Q9NP64 241 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms