RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 PDE4DQ08499 809 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 CLUL1Q15846 466 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 MEA1Q16626 185 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 ZNF827Q17R98 1081 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 ASPRV1Q53RT3 343 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 CCDC122Q5T0U0 273 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 C10orf76Q5T2E6 689 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 KRT79Q5XKE5 535 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 GBP6Q6ZN66 633 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 SLC35F6Q8N357 371 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 RNF10Q8N5U6 811 aaKnown RBP8.51□□□□□ -1.05
ATXN3-249ENST00000564606 SECISBP2LQ93073 1101 aaKnown RBP8.51□□□□□ -1.05
ATXN3-249ENST00000564606 JAKMIP2Q96AA8 810 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 ERGIC2Q96RQ1 377 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 WDR24Q96S15 920 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 RUFY1Q96T51 708 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 TUBGCP2Q9BSJ2 902 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 NOC4LQ9BVI4 516 aaKnown RBP8.51□□□□□ -1.05
ATXN3-249ENST00000564606 TMX4Q9H1E5 349 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-249ENST00000564606 VPS16Q9H269 839 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 ZHX1Q9UKY1 873 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-249ENST00000564606 RTCBQ9Y3I0 505 aaKnown RBP8.51□□□□□ -1.05
ATXN3-249ENST00000564606 JRKLQ9Y4A0 524 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 DAAM1Q9Y4D1 1078 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 MYO3BQ8WXR4 1341 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 MAST2Q6P0Q8 1798 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 XIRP1Q702N8 1843 aaKnown RBP8.5□□□□□ -1.05
ATXN3-249ENST00000564606 TEX33O43247 280 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 MARCH6O60337 910 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 TBC1D8O95759 1140 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 PRCPP42785 496 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 PLA2G4AP47712 749 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 MRPL12P52815 198 aaKnown RBP8.5□□□□□ -1.05
ATXN3-249ENST00000564606 DYNLL1P63167 89 aaKnown RBP8.5□□□□□ -1.05
ATXN3-249ENST00000564606 ASIC1P78348 528 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 NAA30Q147X3 362 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-249ENST00000564606 ERFEQ4G0M1 354 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 CCDC181Q5TID7 509 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 PAPD7Q5XG87 772 aaKnown RBP8.5□□□□□ -1.05
ATXN3-249ENST00000564606 RAD9BQ6WBX8 426 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 UNC13DQ70J99 1090 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 APTXQ7Z2E3 356 aaKnown RBP8.5□□□□□ -1.05
ATXN3-249ENST00000564606 HEATR3Q7Z4Q2 680 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 GRAMD1CQ8IYS0 662 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 REXO1Q8N1G1 1221 aaKnown RBP8.5□□□□□ -1.05
ATXN3-249ENST00000564606 GUF1Q8N442 669 aaKnown RBP8.5□□□□□ -1.05
ATXN3-249ENST00000564606 SYN2Q92777 582 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-249ENST00000564606 KHSRPQ92945 711 aaKnown RBP eCLIP8.5□□□□□ -1.05
ATXN3-249ENST00000564606 CALR3Q96L12 384 aaKnown RBP8.5□□□□□ -1.05
ATXN3-249ENST00000564606 FUT8Q9BYC5 575 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 UBXN6Q9BZV1 441 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 GPBP1L1Q9HC44 474 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-249ENST00000564606 ZNF446Q9NWS9 450 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 TAB2Q9NYJ8 693 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-249ENST00000564606 ANKIB1Q9P2G1 1089 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 SWAP70Q9UH65 585 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 FAM184BQ9ULE4 1060 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 DLEC1Q9Y238 1755 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 SPATA31A5Q5VU36 1347 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 SPATA31A7Q8IWB4 1347 aa8.5□□□□□ -1.05
ATXN3-249ENST00000564606 ZNF335Q9H4Z2 1342 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-249ENST00000564606 MYH6P13533 1939 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 SSU72P8A0A1W2PR75 194 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 PALM3A6NDB9 673 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-249ENST00000564606 KLRF2D3W0D1 207 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 RPS6KA5O75582 802 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 PRDM1O75626 825 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 HOXB3P14651 431 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-249ENST00000564606 HNRNPH3P31942 346 aaKnown RBP8.49□□□□□ -1.05
ATXN3-249ENST00000564606 ACTN2P35609 894 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 FXR1P51114 621 aaKnown RBP eCLIP8.49□□□□□ -1.05
ATXN3-249ENST00000564606 CDR1P51861 262 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 VAV2P52735 878 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 HSPA2P54652 639 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 GRIN1Q05586 938 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 GRAPQ13588 217 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 MAN2A1Q16706 1144 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 GPATCH4Q5T3I0 446 aaKnown RBP8.49□□□□□ -1.05
ATXN3-249ENST00000564606 TRAPPC11Q7Z392 1133 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 VPS36Q86VN1 386 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 SPATS2Q86XZ4 545 aaKnown RBP8.49□□□□□ -1.05
ATXN3-249ENST00000564606 ZSCAN29Q8IWY8 852 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-249ENST00000564606 CMTR1Q8N1G2 835 aaKnown RBP8.49□□□□□ -1.05
ATXN3-249ENST00000564606 NEDD1Q8NHV4 660 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 ERMNQ8TAM6 284 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 GRAPLQ8TC17 118 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-249ENST00000564606 CCDC102AQ96A19 550 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 FAM163AQ96GL9 167 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-249ENST00000564606 CEP63Q96MT8 703 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 DESI2Q9BSY9 194 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 CDHR5Q9HBB8 845 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 INCENPQ9NQS7 918 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 GUCA1BQ9UMX6 200 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 PCDHA6Q9UN73 950 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 L1RE1Q9UN81 338 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 STX8Q9UNK0 236 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 PCDHGA4Q9Y5G9 962 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 PCDHA8Q9Y5H6 950 aa8.49□□□□□ -1.05
ATXN3-249ENST00000564606 BZW2Q9Y6E2 419 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms