RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 MTMR2Q13614 643 aa17.6■□□□□ 0.41
COMMD4-210ENST00000564587 PDIA5Q14554 519 aa17.6■□□□□ 0.41
COMMD4-210ENST00000564587 IL17AQ16552 155 aa17.6■□□□□ 0.41
COMMD4-210ENST00000564587 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.6■□□□□ 0.41
COMMD4-210ENST00000564587 MTMR9Q96QG7 549 aa17.6■□□□□ 0.41
COMMD4-210ENST00000564587 PPP1R9BQ96SB3 815 aa17.6■□□□□ 0.41
COMMD4-210ENST00000564587 BPIFA3Q9BQP9 254 aa17.6■□□□□ 0.41
COMMD4-210ENST00000564587 PANK2Q9BZ23 570 aa17.6■□□□□ 0.41
COMMD4-210ENST00000564587 MAGEF1Q9HAY2 307 aa17.6■□□□□ 0.41
COMMD4-210ENST00000564587 MAP3K20Q9NYL2 800 aaKnown RBP17.6■□□□□ 0.41
COMMD4-210ENST00000564587 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.6■□□□□ 0.41
COMMD4-210ENST00000564587 RABGAP1Q9Y3P9 1069 aa17.6■□□□□ 0.41
COMMD4-210ENST00000564587 CTDP1Q9Y5B0 961 aaPredicted RBP17.6■□□□□ 0.41
COMMD4-210ENST00000564587 SCN4AP35499 1836 aa17.6■□□□□ 0.41
COMMD4-210ENST00000564587 USP17L15C9J2P7 530 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 USP17L13C9JLJ4 530 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 USP17L11C9JVI0 530 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 USP17L18D6R9N7 530 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 USP17L22D6RA61 530 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 USP17L17D6RBQ6 530 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 USP17L19D6RCP7 530 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 USP17L20D6RJB6 530 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 GCOM1H8Y6P7 765 aaPredicted RBP17.59■□□□□ 0.41
COMMD4-210ENST00000564587 ZBED4O75132 1171 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 USP2O75604 605 aaPredicted RBP17.59■□□□□ 0.41
COMMD4-210ENST00000564587 MYL1P05976 194 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 POLR2MP0CAP2 368 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 USP17L24Q0WX57 530 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 SEMA3FQ13275 785 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 NT5DC1Q5TFE4 455 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 USP17L6PQ6QN14 398 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 USP49Q70CQ1 688 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 CCDC84Q86UT8 332 aaPredicted RBP17.59■□□□□ 0.41
COMMD4-210ENST00000564587 MCF2L2Q86YR7 1114 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 SMARCE1Q969G3 411 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 ZKSCAN4Q969J2 545 aaPredicted RBP17.59■□□□□ 0.41
COMMD4-210ENST00000564587 DHX58Q96C10 678 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 MBOAT7Q96N66 472 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 MAF1Q9H063 256 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 EMILIN3Q9NT22 766 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 TMOD4Q9NZQ9 345 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 DDX25Q9UHL0 483 aaKnown RBP17.59■□□□□ 0.41
COMMD4-210ENST00000564587 PPP1R9AQ9ULJ8 1098 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 ZHX2Q9Y6X8 837 aa17.59■□□□□ 0.41
COMMD4-210ENST00000564587 GOLGA6L19H0YKK7 550 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 TBX3O15119 743 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 CYP3A4P08684 503 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 VCAM1P19320 739 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 SREBF1P36956 1147 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 SNAP25P60880 206 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 CT47A1Q5JQC4 288 aaPredicted RBP17.58■□□□□ 0.4
COMMD4-210ENST00000564587 PRAMEF18Q5VWM3 479 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 CCDC174Q6PII3 467 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 KRT26Q7Z3Y9 468 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 SH3RF1Q7Z6J0 888 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 PNMA8AQ86V59 439 aaPredicted RBP17.58■□□□□ 0.4
COMMD4-210ENST00000564587 LDHDQ86WU2 507 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 SLFN12Q8IYM2 578 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 PDILTQ8N807 584 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 TANGO6Q9C0B7 1094 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 DNAJC25Q9H1X3 360 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 RPAP3Q9H6T3 665 aaPredicted RBP17.58■□□□□ 0.4
COMMD4-210ENST00000564587 CBX8Q9HC52 389 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 DACH1Q9UI36 760 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 CSADQ9Y600 493 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 STK24Q9Y6E0 443 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 MYH7BA7E2Y1 1941 aa17.58■□□□□ 0.4
COMMD4-210ENST00000564587 SSC5DA1L4H1 1573 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 MYPNQ86TC9 1320 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 BECN2A8MW95 431 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 MARCH6O60337 910 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 FLOT1O75955 427 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 CIITAP33076 1130 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 ARHGAP4P98171 946 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 PNOCQ13519 176 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 E2F4Q16254 413 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 SH3D19Q5HYK7 790 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 RRAGBQ5VZM2 374 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 POTEDQ86YR6 584 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 IGSF22Q8N9C0 903 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 RASSF8Q8NHQ8 419 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 CRYGNQ8WXF5 182 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 SLC38A10Q9HBR0 1119 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 DISC1Q9NRI5 854 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 FBXO28Q9NVF7 368 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 CCPG1Q9ULG6 757 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 PCDHA5Q9Y5H7 936 aa17.57■□□□□ 0.4
COMMD4-210ENST00000564587 SMTNL1A8MU46 457 aa17.56■□□□□ 0.4
COMMD4-210ENST00000564587 TDP2O95551 362 aa17.56■□□□□ 0.4
COMMD4-210ENST00000564587 STAT6P42226 847 aa17.56■□□□□ 0.4
COMMD4-210ENST00000564587 SARSP49591 514 aaKnown RBP17.56■□□□□ 0.4
COMMD4-210ENST00000564587 OAZ1P54368 228 aa17.56■□□□□ 0.4
COMMD4-210ENST00000564587 TPM4P67936 248 aa17.56■□□□□ 0.4
COMMD4-210ENST00000564587 GHRHRQ02643 423 aa17.56■□□□□ 0.4
COMMD4-210ENST00000564587 Q4G0T1 1027 aa17.56■□□□□ 0.4
COMMD4-210ENST00000564587 SPATA20Q8TB22 786 aa17.56■□□□□ 0.4
COMMD4-210ENST00000564587 CALML4Q96GE6 196 aa17.56■□□□□ 0.4
COMMD4-210ENST00000564587 PAGE5Q96GU1 130 aa17.56■□□□□ 0.4
COMMD4-210ENST00000564587 PDLIM2Q96JY6 352 aa17.56■□□□□ 0.4
COMMD4-210ENST00000564587 GSDMAQ96QA5 445 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms