RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 GRIN2DO15399 1336 aa19.62■□□□□ 0.73
CCNF-203ENST00000564236 TLR3O15455 904 aaKnown RBP19.62■□□□□ 0.73
CCNF-203ENST00000564236 DYNC1LI2O43237 492 aaPredicted RBP19.62■□□□□ 0.73
CCNF-203ENST00000564236 KDM4AO75164 1064 aa19.62■□□□□ 0.73
CCNF-203ENST00000564236 IMMTQ16891 758 aaKnown RBP19.62■□□□□ 0.73
CCNF-203ENST00000564236 SLC30A10Q6XR72 485 aa19.62■□□□□ 0.73
CCNF-203ENST00000564236 RNF207Q6ZRF8 634 aa19.62■□□□□ 0.73
CCNF-203ENST00000564236 PNMA1Q8ND90 353 aa19.62■□□□□ 0.73
CCNF-203ENST00000564236 SEMA6BQ9H3T3 888 aa19.62■□□□□ 0.73
CCNF-203ENST00000564236 PTPDC1A2A3K4 754 aa19.61■□□□□ 0.73
CCNF-203ENST00000564236 RPS6P62753 249 aaKnown RBP19.61■□□□□ 0.73
CCNF-203ENST00000564236 PPIGQ13427 754 aaKnown RBP eCLIP19.61■□□□□ 0.737e-7■■■■■ 27.8
CCNF-203ENST00000564236 ITGA7Q13683 1181 aa19.61■□□□□ 0.73
CCNF-203ENST00000564236 TMEM63BQ5T3F8 832 aa19.61■□□□□ 0.73
CCNF-203ENST00000564236 KIAA1211Q6ZU35 1233 aa19.61■□□□□ 0.73
CCNF-203ENST00000564236 NOL8Q76FK4 1167 aaKnown RBP19.61■□□□□ 0.73
CCNF-203ENST00000564236 EEPD1Q7L9B9 569 aa19.61■□□□□ 0.73
CCNF-203ENST00000564236 ENAHQ8N8S7 591 aaPredicted RBP19.61■□□□□ 0.73
CCNF-203ENST00000564236 VTI1AQ96AJ9 217 aa19.61■□□□□ 0.73
CCNF-203ENST00000564236 ZSCAN10Q96SZ4 725 aaPredicted RBP19.61■□□□□ 0.73
CCNF-203ENST00000564236 ZKSCAN3Q9BRR0 538 aa19.61■□□□□ 0.73
CCNF-203ENST00000564236 ZSWIM5Q9P217 1185 aa19.61■□□□□ 0.73
CCNF-203ENST00000564236 RAD50Q92878 1312 aa19.6■□□□□ 0.73
CCNF-203ENST00000564236 PTGS1P23219 599 aa19.6■□□□□ 0.73
CCNF-203ENST00000564236 ASPRV1Q53RT3 343 aa19.6■□□□□ 0.73
CCNF-203ENST00000564236 C16orf59Q7L2K0 433 aa19.6■□□□□ 0.73
CCNF-203ENST00000564236 TMEM199Q8N511 208 aa19.6■□□□□ 0.73
CCNF-203ENST00000564236 WDR11Q9BZH6 1224 aa19.6■□□□□ 0.73
CCNF-203ENST00000564236 KRT23Q9C075 422 aa19.6■□□□□ 0.73
CCNF-203ENST00000564236 IL25Q9H293 177 aa19.6■□□□□ 0.73
CCNF-203ENST00000564236 TTYH1Q9H313 450 aaPredicted RBP19.6■□□□□ 0.73
CCNF-203ENST00000564236 CNNM2Q9H8M5 875 aa19.6■□□□□ 0.73
CCNF-203ENST00000564236 A0A0C4DFX4 3053 aa19.6■□□□□ 0.73
CCNF-203ENST00000564236 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.59■□□□□ 0.73
CCNF-203ENST00000564236 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.59■□□□□ 0.73
CCNF-203ENST00000564236 B4E1Z4 1266 aa19.59■□□□□ 0.73
CCNF-203ENST00000564236 NKRFO15226 690 aaKnown RBP eCLIP19.59■□□□□ 0.73
CCNF-203ENST00000564236 GSPT1P15170 499 aaKnown RBP19.59■□□□□ 0.73
CCNF-203ENST00000564236 PDE4AP27815 886 aa19.59■□□□□ 0.73
CCNF-203ENST00000564236 TMEM240Q5SV17 173 aa19.59■□□□□ 0.73
CCNF-203ENST00000564236 MPHOSPH6Q99547 160 aaKnown RBP19.59■□□□□ 0.73
CCNF-203ENST00000564236 CDX2Q99626 313 aaPredicted RBP19.59■□□□□ 0.73
CCNF-203ENST00000564236 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.59■□□□□ 0.731e-8■■■■■ 30.7
CCNF-203ENST00000564236 KAT14Q9H8E8 782 aa19.59■□□□□ 0.73
CCNF-203ENST00000564236 TNKSO95271 1327 aa19.58■□□□□ 0.73
CCNF-203ENST00000564236 GOLGA8HP0CJ92 632 aa19.58■□□□□ 0.72
CCNF-203ENST00000564236 CALML3P27482 149 aa19.58■□□□□ 0.72
CCNF-203ENST00000564236 TTC22Q5TAA0 569 aa19.58■□□□□ 0.72
CCNF-203ENST00000564236 PSRC1Q6PGN9 363 aaPredicted RBP19.58■□□□□ 0.72
CCNF-203ENST00000564236 POLR3EQ9NVU0 708 aa19.58■□□□□ 0.72
CCNF-203ENST00000564236 UNC80Q8N2C7 3258 aa19.58■□□□□ 0.72
CCNF-203ENST00000564236 ABCB11O95342 1321 aa19.57■□□□□ 0.72
CCNF-203ENST00000564236 B4DLN1 442 aa19.57■□□□□ 0.72
CCNF-203ENST00000564236 CSF2RAP15509 400 aa19.57■□□□□ 0.72
CCNF-203ENST00000564236 CPT1AP50416 773 aa19.57■□□□□ 0.72
CCNF-203ENST00000564236 MRPL12P52815 198 aaKnown RBP19.57■□□□□ 0.72
CCNF-203ENST00000564236 PURAQ00577 322 aaKnown RBP19.57■□□□□ 0.72
CCNF-203ENST00000564236 CDC37Q16543 378 aaPredicted RBP19.57■□□□□ 0.72
CCNF-203ENST00000564236 ADGRF4Q8IZF3 695 aa19.57■□□□□ 0.72
CCNF-203ENST00000564236 SCFD2Q8WU76 684 aa19.57■□□□□ 0.72
CCNF-203ENST00000564236 FAM161BQ96MY7 647 aa19.57■□□□□ 0.72
CCNF-203ENST00000564236 UBA5Q9GZZ9 404 aa19.57■□□□□ 0.72
CCNF-203ENST00000564236 A6NJR5 290 aa19.56■□□□□ 0.72
CCNF-203ENST00000564236 B4GALT4O60513 344 aa19.56■□□□□ 0.72
CCNF-203ENST00000564236 GHRHRQ02643 423 aa19.56■□□□□ 0.72
CCNF-203ENST00000564236 PDE4DQ08499 809 aa19.56■□□□□ 0.72
CCNF-203ENST00000564236 SEC23AQ15436 765 aa19.56■□□□□ 0.72
CCNF-203ENST00000564236 NOC4LQ9BVI4 516 aaKnown RBP19.56■□□□□ 0.72
CCNF-203ENST00000564236 CPVLQ9H3G5 476 aa19.56■□□□□ 0.72
CCNF-203ENST00000564236 HIPK3Q9H422 1215 aa19.56■□□□□ 0.72
CCNF-203ENST00000564236 IL23AQ9NPF7 189 aa19.56■□□□□ 0.72
CCNF-203ENST00000564236 KPNA6O60684 536 aa19.55■□□□□ 0.72
CCNF-203ENST00000564236 PARP1P09874 1014 aaKnown RBP19.55■□□□□ 0.72
CCNF-203ENST00000564236 PPP2R5BQ15173 497 aa19.55■□□□□ 0.72
CCNF-203ENST00000564236 HERVK_113Q902F9 699 aa19.55■□□□□ 0.72
CCNF-203ENST00000564236 MTMR8Q96EF0 704 aa19.55■□□□□ 0.72
CCNF-203ENST00000564236 UBAC1Q9BSL1 405 aa19.55■□□□□ 0.72
CCNF-203ENST00000564236 PPP1R12CQ9BZL4 782 aa19.55■□□□□ 0.72
CCNF-203ENST00000564236 ALDH8A1Q9H2A2 487 aaPredicted RBP19.55■□□□□ 0.72
CCNF-203ENST00000564236 JMJD4Q9H9V9 463 aa19.55■□□□□ 0.72
CCNF-203ENST00000564236 SUPT16HQ9Y5B9 1047 aaKnown RBP19.55■□□□□ 0.72
CCNF-203ENST00000564236 EYSQ5T1H1 3165 aa19.54■□□□□ 0.72
CCNF-203ENST00000564236 DLL1O00548 723 aa19.54■□□□□ 0.72
CCNF-203ENST00000564236 DNAJB2P25686 324 aa19.54■□□□□ 0.72
CCNF-203ENST00000564236 CYP2C18P33260 490 aa19.54■□□□□ 0.72
CCNF-203ENST00000564236 PSMC6P62333 389 aa19.54■□□□□ 0.72
CCNF-203ENST00000564236 QRICH1Q2TAL8 776 aa19.54■□□□□ 0.72
CCNF-203ENST00000564236 USH1GQ495M9 461 aa19.54■□□□□ 0.72
CCNF-203ENST00000564236 CCDC62Q6P9F0 684 aa19.54■□□□□ 0.72
CCNF-203ENST00000564236 MCF2L2Q86YR7 1114 aa19.54■□□□□ 0.72
CCNF-203ENST00000564236 OR6J1Q8NGC5 347 aa19.54■□□□□ 0.72
CCNF-203ENST00000564236 SYTL5Q8TDW5 730 aaPredicted RBP19.54■□□□□ 0.72
CCNF-203ENST00000564236 IWS1Q96ST2 819 aa19.54■□□□□ 0.72
CCNF-203ENST00000564236 SUPT20HL2P0C7V6 817 aa19.53■□□□□ 0.72
CCNF-203ENST00000564236 IFIT1BQ5T764 474 aaKnown RBP19.53■□□□□ 0.72
CCNF-203ENST00000564236 ZNF365Q70YC5 407 aa19.53■□□□□ 0.72
CCNF-203ENST00000564236 NSUN6Q8TEA1 469 aaKnown RBP19.53■□□□□ 0.72
CCNF-203ENST00000564236 MTG1Q9BT17 334 aaPredicted RBP19.53■□□□□ 0.72
CCNF-203ENST00000564236 TRPV6Q9H1D0 765 aa19.53■□□□□ 0.72
CCNF-203ENST00000564236 COL20A1Q9P218 1284 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms