RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 JAKMIP3Q5VZ66 844 aa14.63□□□□□ -0.07
CLK3-214ENST00000564096 FAM43AQ8N2R8 423 aa14.63□□□□□ -0.07
CLK3-214ENST00000564096 JMYQ8N9B5 988 aa14.63□□□□□ -0.07
CLK3-214ENST00000564096 ANO3Q9BYT9 981 aa14.63□□□□□ -0.07
CLK3-214ENST00000564096 BIN2Q9UBW5 565 aaPredicted RBP14.63□□□□□ -0.07
CLK3-214ENST00000564096 PFASO15067 1338 aa14.63□□□□□ -0.07
CLK3-214ENST00000564096 RLFQ13129 1914 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 YEATS4O95619 227 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 ALDH1A1P00352 501 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 CYP2C8P10632 490 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 TAL1P17542 331 aaPredicted RBP14.62□□□□□ -0.07
CLK3-214ENST00000564096 HSD17B4P51659 736 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 STK38Q15208 465 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 TAF1CQ15572 869 aaPredicted RBP14.62□□□□□ -0.07
CLK3-214ENST00000564096 DEFB115Q30KQ5 88 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 TTC38Q5R3I4 469 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 FAM173BQ6P4H8 233 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 USP17L6PQ6QN14 398 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 NSMFQ6X4W1 530 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 RNF207Q6ZRF8 634 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 NEK8Q86SG6 692 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 SHCBP1Q8NEM2 672 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 GPRC5AQ8NFJ5 357 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 KCNG4Q8TDN1 519 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 SPATA32Q96LK8 384 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 CNPY2Q9Y2B0 182 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 ELP1O95163 1332 aa14.62□□□□□ -0.07
CLK3-214ENST00000564096 NFIBO00712 420 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 MEIS2O14770 477 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 OPLAHO14841 1288 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 NASPP49321 788 aaPredicted RBP14.61□□□□□ -0.07
CLK3-214ENST00000564096 ERVK-9P63128 1117 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 ERVK-24P63145 666 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 SF3A1Q15459 793 aaKnown RBP14.61□□□□□ -0.07
CLK3-214ENST00000564096 FAM110CQ1W6H9 321 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 INF2Q27J81 1249 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 ANO1Q5XXA6 986 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 CYP4F22Q6NT55 531 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 NCAPG2Q86XI2 1143 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 IFNL1Q8IU54 200 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 CCAR1Q8IX12 1150 aaKnown RBP14.61□□□□□ -0.07
CLK3-214ENST00000564096 TMEM87AQ8NBN3 555 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 TBCKQ8TEA7 893 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 CLEC4DQ8WXI8 215 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 CAPNS2Q96L46 248 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 USP28Q96RU2 1077 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 MROH8Q9H579 483 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 TMEM260Q9NX78 707 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 RTEL1Q9NZ71 1219 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 BTBD7Q9P203 1132 aa14.61□□□□□ -0.07
CLK3-214ENST00000564096 MYH15Q9Y2K3 1946 aa14.6□□□□□ -0.07
CLK3-214ENST00000564096 IGF2BP3O00425 579 aaKnown RBP eCLIP14.6□□□□□ -0.07
CLK3-214ENST00000564096 CNMDO75829 334 aa14.6□□□□□ -0.07
CLK3-214ENST00000564096 GCFC2P16383 781 aaKnown RBP14.6□□□□□ -0.07
CLK3-214ENST00000564096 ATP2B1P20020 1258 aa14.6□□□□□ -0.07
CLK3-214ENST00000564096 HOXA13P31271 388 aaPredicted RBP14.6□□□□□ -0.07
CLK3-214ENST00000564096 MUM1L1Q5H9M0 696 aa14.6□□□□□ -0.07
CLK3-214ENST00000564096 PTPN18Q99952 460 aa14.6□□□□□ -0.07
CLK3-214ENST00000564096 MOV10L1Q9BXT6 1211 aaKnown RBP14.6□□□□□ -0.07
CLK3-214ENST00000564096 ZFYVE28Q9HCC9 887 aa14.6□□□□□ -0.07
CLK3-214ENST00000564096 MORF4L1Q9UBU8 362 aa14.6□□□□□ -0.07
CLK3-214ENST00000564096 GOLGA6L4A6NEF3 574 aa14.59□□□□□ -0.07
CLK3-214ENST00000564096 FAM205CA6NFA0 338 aa14.59□□□□□ -0.07
CLK3-214ENST00000564096 ERCC3P19447 782 aa14.59□□□□□ -0.07
CLK3-214ENST00000564096 MCM4P33991 863 aa14.59□□□□□ -0.07
CLK3-214ENST00000564096 SREBF1P36956 1147 aa14.59□□□□□ -0.07
CLK3-214ENST00000564096 RPS6P62753 249 aaKnown RBP14.59□□□□□ -0.07
CLK3-214ENST00000564096 CEBPZQ03701 1054 aaKnown RBP14.59□□□□□ -0.07
CLK3-214ENST00000564096 LETM2Q2VYF4 491 aa14.59□□□□□ -0.07
CLK3-214ENST00000564096 EARS2Q5JPH6 523 aaKnown RBP14.59□□□□□ -0.07
CLK3-214ENST00000564096 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.59□□□□□ -0.07
CLK3-214ENST00000564096 FCHSD1Q86WN1 690 aa14.59□□□□□ -0.07
CLK3-214ENST00000564096 ANKRD35Q8N283 1001 aa14.59□□□□□ -0.07
CLK3-214ENST00000564096 ANKRD13CQ8N6S4 541 aa14.59□□□□□ -0.07
CLK3-214ENST00000564096 LEO1Q8WVC0 666 aaPredicted RBP14.59□□□□□ -0.07
CLK3-214ENST00000564096 PGBD1Q96JS3 809 aa14.59□□□□□ -0.07
CLK3-214ENST00000564096 MPHOSPH6Q99547 160 aaKnown RBP14.59□□□□□ -0.07
CLK3-214ENST00000564096 RBPJLQ9UBG7 517 aa14.59□□□□□ -0.07
CLK3-214ENST00000564096 RIPK3Q9Y572 518 aa14.59□□□□□ -0.07
CLK3-214ENST00000564096 COL11A1P12107 1806 aaPredicted RBP14.58□□□□□ -0.08
CLK3-214ENST00000564096 LAD1O00515 517 aa14.58□□□□□ -0.08
CLK3-214ENST00000564096 SPTLC2O15270 562 aa14.58□□□□□ -0.08
CLK3-214ENST00000564096 NEMFO60524 1076 aa14.58□□□□□ -0.08
CLK3-214ENST00000564096 CCNT1O60563 726 aaKnown RBP14.58□□□□□ -0.08
CLK3-214ENST00000564096 TM4SF4P48230 202 aa14.58□□□□□ -0.08
CLK3-214ENST00000564096 ARHGAP4P98171 946 aa14.58□□□□□ -0.08
CLK3-214ENST00000564096 KCTD2Q14681 263 aa14.58□□□□□ -0.08
CLK3-214ENST00000564096 WDR78Q5VTH9 848 aa14.58□□□□□ -0.08
CLK3-214ENST00000564096 MOXD1Q6UVY6 613 aa14.58□□□□□ -0.08
CLK3-214ENST00000564096 SLC30A10Q6XR72 485 aa14.58□□□□□ -0.08
CLK3-214ENST00000564096 SYTL5Q8TDW5 730 aaPredicted RBP14.58□□□□□ -0.08
CLK3-214ENST00000564096 FTOQ9C0B1 505 aaKnown RBP eCLIP14.58□□□□□ -0.08
CLK3-214ENST00000564096 TXNRD2Q9NNW7 524 aa14.58□□□□□ -0.08
CLK3-214ENST00000564096 A1CFQ9NQ94 594 aaKnown RBP14.58□□□□□ -0.08
CLK3-214ENST00000564096 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.58□□□□□ -0.08
CLK3-214ENST00000564096 MORC2Q9Y6X9 1032 aaPredicted RBP14.58□□□□□ -0.08
CLK3-214ENST00000564096 IVNS1ABPQ9Y6Y0 642 aa14.58□□□□□ -0.08
CLK3-214ENST00000564096 CEP350Q5VT06 3117 aa14.57□□□□□ -0.08
CLK3-214ENST00000564096 B4DLN1 442 aa14.57□□□□□ -0.08
CLK3-214ENST00000564096 MAPK4P31152 587 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms