RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 SLC30A10Q6XR72 485 aa17.05■□□□□ 0.32
SCAMP2-203ENST00000563663 FBXO11Q86XK2 927 aa17.05■□□□□ 0.32
SCAMP2-203ENST00000563663 AMNQ9BXJ7 453 aa17.05■□□□□ 0.32
SCAMP2-203ENST00000563663 NCOA5Q9HCD5 579 aaKnown RBP17.05■□□□□ 0.32
SCAMP2-203ENST00000563663 PNMA2Q9UL42 364 aa17.05■□□□□ 0.32
SCAMP2-203ENST00000563663 TNRC18O15417 2968 aaPredicted RBP17.04■□□□□ 0.32
SCAMP2-203ENST00000563663 hCG_1642624A0A1W2PR95 340 aa17.04■□□□□ 0.32
SCAMP2-203ENST00000563663 SOWAHBA6NEL2 793 aa17.04■□□□□ 0.32
SCAMP2-203ENST00000563663 DHX16O60231 1041 aaKnown RBP17.04■□□□□ 0.32
SCAMP2-203ENST00000563663 LARGE1O95461 756 aa17.04■□□□□ 0.32
SCAMP2-203ENST00000563663 FGD1P98174 961 aa17.04■□□□□ 0.32
SCAMP2-203ENST00000563663 TRPV1Q8NER1 839 aa17.04■□□□□ 0.32
SCAMP2-203ENST00000563663 ZNF274Q96GC6 653 aaPredicted RBP17.04■□□□□ 0.32
SCAMP2-203ENST00000563663 COL20A1Q9P218 1284 aa17.04■□□□□ 0.32
SCAMP2-203ENST00000563663 ABCB11O95342 1321 aa17.04■□□□□ 0.32
SCAMP2-203ENST00000563663 PFASO15067 1338 aa17.03■□□□□ 0.32
SCAMP2-203ENST00000563663 RPS6P62753 249 aaKnown RBP17.03■□□□□ 0.32
SCAMP2-203ENST00000563663 CACNB2Q08289 660 aaPredicted RBP17.03■□□□□ 0.32
SCAMP2-203ENST00000563663 ST3GAL1Q11201 340 aa17.03■□□□□ 0.32
SCAMP2-203ENST00000563663 BAATQ14032 418 aaPredicted RBP17.03■□□□□ 0.32
SCAMP2-203ENST00000563663 PPP2R5BQ15173 497 aa17.03■□□□□ 0.32
SCAMP2-203ENST00000563663 TYW1BQ6NUM6 668 aa17.03■□□□□ 0.32
SCAMP2-203ENST00000563663 MAMDC4Q6UXC1 1216 aa17.03■□□□□ 0.32
SCAMP2-203ENST00000563663 SYNE3Q6ZMZ3 975 aa17.03■□□□□ 0.32
SCAMP2-203ENST00000563663 ZNF467Q7Z7K2 595 aaPredicted RBP17.03■□□□□ 0.32
SCAMP2-203ENST00000563663 DPP9Q86TI2 863 aa17.03■□□□□ 0.32
SCAMP2-203ENST00000563663 ANKRD35Q8N283 1001 aa17.03■□□□□ 0.32
SCAMP2-203ENST00000563663 CCDC82Q8N4S0 544 aa17.03■□□□□ 0.32
SCAMP2-203ENST00000563663 RGS22Q8NE09 1264 aa17.03■□□□□ 0.32
SCAMP2-203ENST00000563663 PAK6Q9NQU5 681 aaPredicted RBP17.03■□□□□ 0.32
SCAMP2-203ENST00000563663 DDX49Q9Y6V7 483 aaKnown RBP17.03■□□□□ 0.32
SCAMP2-203ENST00000563663 CYP2C19P33261 490 aa17.02■□□□□ 0.32
SCAMP2-203ENST00000563663 PIBF1Q8WXW3 757 aa17.02■□□□□ 0.32
SCAMP2-203ENST00000563663 SHISA4Q96DD7 197 aa17.02■□□□□ 0.32
SCAMP2-203ENST00000563663 KATNBL1Q9H079 304 aa17.02■□□□□ 0.32
SCAMP2-203ENST00000563663 UNC93B1Q9H1C4 597 aa17.02■□□□□ 0.32
SCAMP2-203ENST00000563663 PCDHA1Q9Y5I3 950 aa17.02■□□□□ 0.32
SCAMP2-203ENST00000563663 CYBAP13498 195 aa17.02■□□□□ 0.31
SCAMP2-203ENST00000563663 PRKAR2AP13861 404 aaKnown RBP17.02■□□□□ 0.31
SCAMP2-203ENST00000563663 HSD17B4P51659 736 aa17.02■□□□□ 0.31
SCAMP2-203ENST00000563663 NSMFQ6X4W1 530 aa17.02■□□□□ 0.31
SCAMP2-203ENST00000563663 TRMT44Q8IYL2 757 aaKnown RBP17.02■□□□□ 0.31
SCAMP2-203ENST00000563663 ZDHHC9Q9Y397 364 aa17.02■□□□□ 0.31
SCAMP2-203ENST00000563663 SNAI1O95863 264 aaPredicted RBP17.01■□□□□ 0.31
SCAMP2-203ENST00000563663 CCT2P78371 535 aaKnown RBP17.01■□□□□ 0.31
SCAMP2-203ENST00000563663 SCRN1Q12765 414 aa17.01■□□□□ 0.31
SCAMP2-203ENST00000563663 PKN1Q16512 942 aa17.01■□□□□ 0.31
SCAMP2-203ENST00000563663 ME3Q16798 604 aa17.01■□□□□ 0.31
SCAMP2-203ENST00000563663 MORC4Q8TE76 937 aa17.01■□□□□ 0.31
SCAMP2-203ENST00000563663 RRP36Q96EU6 259 aaKnown RBP17.01■□□□□ 0.31
SCAMP2-203ENST00000563663 DDX11Q96FC9 970 aa17.01■□□□□ 0.31
SCAMP2-203ENST00000563663 TINF2Q9BSI4 451 aa17.01■□□□□ 0.31
SCAMP2-203ENST00000563663 MAF1Q9H063 256 aa17.01■□□□□ 0.31
SCAMP2-203ENST00000563663 PFKFB2O60825 505 aa17■□□□□ 0.31
SCAMP2-203ENST00000563663 BRD1O95696 1058 aa17■□□□□ 0.31
SCAMP2-203ENST00000563663 XRCC6P12956 609 aaKnown RBP eCLIP17■□□□□ 0.31
SCAMP2-203ENST00000563663 CCL5P13501 91 aa17■□□□□ 0.31
SCAMP2-203ENST00000563663 IFNAR1P17181 557 aa17■□□□□ 0.31
SCAMP2-203ENST00000563663 WWC2Q6AWC2 1192 aa17■□□□□ 0.31
SCAMP2-203ENST00000563663 RNF207Q6ZRF8 634 aa17■□□□□ 0.31
SCAMP2-203ENST00000563663 SYTL5Q8TDW5 730 aaPredicted RBP17■□□□□ 0.31
SCAMP2-203ENST00000563663 GZF1Q9H116 711 aaPredicted RBP17■□□□□ 0.31
SCAMP2-203ENST00000563663 MRPL11Q9Y3B7 192 aaKnown RBP17■□□□□ 0.31
SCAMP2-203ENST00000563663 SYNGAP1Q96PV0 1343 aa17■□□□□ 0.31
SCAMP2-203ENST00000563663 POTEFA5A3E0 1075 aa17■□□□□ 0.31
SCAMP2-203ENST00000563663 POTEB2H3BUK9 544 aa17■□□□□ 0.31
SCAMP2-203ENST00000563663 EDNRBP24530 442 aa17■□□□□ 0.31
SCAMP2-203ENST00000563663 CCND3P30281 292 aaPredicted RBP17■□□□□ 0.31
SCAMP2-203ENST00000563663 MSL3Q8N5Y2 521 aaKnown RBP17■□□□□ 0.31
SCAMP2-203ENST00000563663 GPKOWQ92917 476 aaPredicted RBP eCLIP17■□□□□ 0.31
SCAMP2-203ENST00000563663 PHKBQ93100 1093 aa17■□□□□ 0.31
SCAMP2-203ENST00000563663 LMBRD1Q9NUN5 540 aa17■□□□□ 0.31
SCAMP2-203ENST00000563663 NAP1L2Q9ULW6 460 aaPredicted RBP17■□□□□ 0.31
SCAMP2-203ENST00000563663 V9GY48 417 aaPredicted RBP17■□□□□ 0.31
SCAMP2-203ENST00000563663 KIAA1217Q5T5P2 1943 aa16.99■□□□□ 0.31
SCAMP2-203ENST00000563663 CCDC196A0A1B0GTZ2 297 aa16.99■□□□□ 0.31
SCAMP2-203ENST00000563663 CTDNEP1O95476 244 aa16.99■□□□□ 0.31
SCAMP2-203ENST00000563663 MYCP01106 439 aaPredicted RBP16.99■□□□□ 0.31
SCAMP2-203ENST00000563663 ZNF865P0CJ78 1059 aaPredicted RBP16.99■□□□□ 0.31
SCAMP2-203ENST00000563663 SLC5A4Q9NY91 659 aa16.99■□□□□ 0.31
SCAMP2-203ENST00000563663 RPTORQ8N122 1335 aa16.98■□□□□ 0.31
SCAMP2-203ENST00000563663 PTPDC1A2A3K4 754 aa16.98■□□□□ 0.31
SCAMP2-203ENST00000563663 MEIS2O14770 477 aa16.98■□□□□ 0.31
SCAMP2-203ENST00000563663 PPFIA3O75145 1194 aa16.98■□□□□ 0.31
SCAMP2-203ENST00000563663 STK3Q13188 491 aa16.98■□□□□ 0.31
SCAMP2-203ENST00000563663 PRAMEF19Q5SWL8 479 aa16.98■□□□□ 0.31
SCAMP2-203ENST00000563663 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.98■□□□□ 0.31
SCAMP2-203ENST00000563663 FRMPD4Q14CM0 1322 aa16.98■□□□□ 0.31
SCAMP2-203ENST00000563663 STXBP3O00186 592 aa16.97■□□□□ 0.31
SCAMP2-203ENST00000563663 ADCY6O43306 1168 aa16.97■□□□□ 0.31
SCAMP2-203ENST00000563663 PRPF3O43395 683 aaKnown RBP16.97■□□□□ 0.31
SCAMP2-203ENST00000563663 CALML3P27482 149 aa16.97■□□□□ 0.31
SCAMP2-203ENST00000563663 ALDH5A1P51649 535 aaPredicted RBP16.97■□□□□ 0.31
SCAMP2-203ENST00000563663 UBXN2AP68543 259 aa16.97■□□□□ 0.31
SCAMP2-203ENST00000563663 ANKRD1Q15327 319 aa16.97■□□□□ 0.31
SCAMP2-203ENST00000563663 PFKFB3Q16875 520 aaPredicted RBP16.97■□□□□ 0.31
SCAMP2-203ENST00000563663 LHX8Q68G74 356 aa16.97■□□□□ 0.31
SCAMP2-203ENST00000563663 ARMCX2Q7L311 632 aa16.97■□□□□ 0.31
SCAMP2-203ENST00000563663 GTF3C6Q969F1 213 aa16.97■□□□□ 0.31
SCAMP2-203ENST00000563663 RNF26Q9BY78 433 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms