RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 ESYT3A0FGR9 886 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 OPA1O60313 960 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 KIAA0754O94854 1291 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 KLRK1P26718 216 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 AMPD3Q01432 767 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 HLTFQ14527 1009 aaKnown RBP eCLIP13.13□□□□□ -0.31
ABCA3-203ENST00000563623 CCDC40Q4G0X9 1142 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 PAPD7Q5XG87 772 aaKnown RBP13.13□□□□□ -0.31
ABCA3-203ENST00000563623 PACS2Q86VP3 889 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 SLC44A5Q8NCS7 719 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 FAM212AQ96EL1 285 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 FAM184BQ9ULE4 1060 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 NDUFAB1O14561 156 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 KIF11P52732 1056 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 ERFEQ4G0M1 354 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 PARP10Q53GL7 1025 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 NAALADL2Q58DX5 795 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 RNF187Q5TA31 235 aaPredicted RBP13.13□□□□□ -0.31
ABCA3-203ENST00000563623 TTI2Q6NXR4 508 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 TMC4Q7Z404 712 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 MAATS1Q7Z4T9 603 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 NOC3LQ8WTT2 800 aaKnown RBP13.13□□□□□ -0.31
ABCA3-203ENST00000563623 DHTKD1Q96HY7 919 aaPredicted RBP13.13□□□□□ -0.31
ABCA3-203ENST00000563623 TSGA10Q9BZW7 698 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 TBC1D7Q9P0N9 293 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 BIN2Q9UBW5 565 aaPredicted RBP13.13□□□□□ -0.31
ABCA3-203ENST00000563623 JRKLQ9Y4A0 524 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 PSEN1P49768 467 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 PDCLQ13371 301 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 CCDC170Q8IYT3 715 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 SH2D3CQ8N5H7 860 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 VIPAS39Q9H9C1 493 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 EPS15P42566 896 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 MS4A14Q96JA4 679 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 FAM84BQ96KN1 310 aaPredicted RBP13.12□□□□□ -0.31
ABCA3-203ENST00000563623 DUSP9Q99956 384 aaKnown RBP13.12□□□□□ -0.31
ABCA3-203ENST00000563623 NCAPGQ9BPX3 1015 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 SLAIN2Q9P270 581 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 LMTK3Q96Q04 1460 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 TRPM3Q9HCF6 1732 aaPredicted RBP13.12□□□□□ -0.31
ABCA3-203ENST00000563623 OR52Z1P0C646 297 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 FECHP22830 423 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 HIBADHP31937 336 aaKnown RBP13.12□□□□□ -0.31
ABCA3-203ENST00000563623 MNAT1P51948 309 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 CFAP58Q5T655 872 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 SPATA4Q8NEY3 305 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 ZNF507Q8TCN5 953 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 YY1AP1Q9H869 796 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 SEC63Q9UGP8 760 aaKnown RBP13.12□□□□□ -0.31
ABCA3-203ENST00000563623 SNX12Q9UMY4 172 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 HYOU1Q9Y4L1 999 aa13.12□□□□□ -0.31
ABCA3-203ENST00000563623 ERLIN2O94905 339 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 IRAK1P51617 712 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 CORO7P57737 925 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 SV2BQ7L1I2 683 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 GIMAP8Q8ND71 665 aaPredicted RBP13.11□□□□□ -0.31
ABCA3-203ENST00000563623 CELF1Q92879 486 aaKnown RBP13.11□□□□□ -0.31
ABCA3-203ENST00000563623 PCDHA6Q9UN73 950 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 PCDHA8Q9Y5H6 950 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 MYH6P13533 1939 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 PLEKHG2Q9H7P9 1386 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 SMCO2A6NFE2 343 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 GNAQP50148 359 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 CNNM4Q6P4Q7 775 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 OSBPL9Q96SU4 736 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 KANSL2Q9H9L4 492 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 ZNF652Q9Y2D9 606 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 TARSL2A2RTX5 802 aaKnown RBP13.11□□□□□ -0.31
ABCA3-203ENST00000563623 NKRFO15226 690 aaKnown RBP eCLIP13.11□□□□□ -0.31
ABCA3-203ENST00000563623 RHOBTB3O94955 611 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 FTCDO95954 541 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 GUCY2DQ02846 1103 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 GFPT1Q06210 699 aaPredicted RBP13.11□□□□□ -0.31
ABCA3-203ENST00000563623 PPFIA1Q13136 1202 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 UBE4AQ14139 1066 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 NONOQ15233 471 aaKnown RBP eCLIP13.11□□□□□ -0.311e-7■■■■□ 25.1
ABCA3-203ENST00000563623 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.11□□□□□ -0.31
ABCA3-203ENST00000563623 KLHL7Q8IXQ5 586 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 CCDC155Q8N6L0 562 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 TRIM9Q9C026 710 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 FAM169AQ9Y6X4 670 aa13.11□□□□□ -0.31
ABCA3-203ENST00000563623 LAMB4A4D0S4 1761 aa13.1□□□□□ -0.31
ABCA3-203ENST00000563623 LRRC53A6NM62 1247 aa13.1□□□□□ -0.31
ABCA3-203ENST00000563623 KLRF2D3W0D1 207 aa13.1□□□□□ -0.31
ABCA3-203ENST00000563623 TRAF5O00463 557 aa13.1□□□□□ -0.31
ABCA3-203ENST00000563623 HPDP32754 393 aaPredicted RBP13.1□□□□□ -0.31
ABCA3-203ENST00000563623 KCNB1Q14721 858 aa13.1□□□□□ -0.31
ABCA3-203ENST00000563623 C3orf67Q6ZVT6 689 aa13.1□□□□□ -0.31
ABCA3-203ENST00000563623 MAPKAPK5Q8IW41 473 aa13.1□□□□□ -0.31
ABCA3-203ENST00000563623 TGFBRAP1Q8WUH2 860 aa13.1□□□□□ -0.31
ABCA3-203ENST00000563623 CCDC43Q96MW1 224 aaKnown RBP13.1□□□□□ -0.31
ABCA3-203ENST00000563623 UBA5Q9GZZ9 404 aa13.1□□□□□ -0.31
ABCA3-203ENST00000563623 NDST4Q9H3R1 872 aa13.1□□□□□ -0.31
ABCA3-203ENST00000563623 CEP83Q9Y592 693 aa13.1□□□□□ -0.31
ABCA3-203ENST00000563623 NID2Q14112 1375 aa13.1□□□□□ -0.31
ABCA3-203ENST00000563623 COL5A2P05997 1499 aaPredicted RBP13.1□□□□□ -0.31
ABCA3-203ENST00000563623 ANO9A1A5B4 782 aa13.1□□□□□ -0.31
ABCA3-203ENST00000563623 KLRC4O43908 158 aa13.1□□□□□ -0.31
ABCA3-203ENST00000563623 INPP5BP32019 993 aa13.1□□□□□ -0.31
ABCA3-203ENST00000563623 TADA2BQ86TJ2 420 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms