RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 RTF1Q92541 710 aaKnown RBP5.97□□□□□ -1.45
CDR2-203ENST00000563573 UBE2FQ969M7 185 aa5.97□□□□□ -1.45
CDR2-203ENST00000563573 ALPK1Q96QP1 1244 aa5.97□□□□□ -1.45
CDR2-203ENST00000563573 GZF1Q9H116 711 aaPredicted RBP5.97□□□□□ -1.45
CDR2-203ENST00000563573 TRIT1Q9H3H1 467 aaKnown RBP5.97□□□□□ -1.45
CDR2-203ENST00000563573 BTG4Q9NY30 223 aa5.97□□□□□ -1.45
CDR2-203ENST00000563573 TJP2Q9UDY2 1190 aa5.97□□□□□ -1.45
CDR2-203ENST00000563573 DLG5Q8TDM6 1919 aa5.97□□□□□ -1.45
CDR2-203ENST00000563573 WDR17Q8IZU2 1322 aa5.97□□□□□ -1.45
CDR2-203ENST00000563573 RGPD1P0DJD0 1748 aa5.96□□□□□ -1.45
CDR2-203ENST00000563573 HTATSF1O43719 755 aaKnown RBP5.96□□□□□ -1.46
CDR2-203ENST00000563573 BPNT1O95861 308 aa5.96□□□□□ -1.46
CDR2-203ENST00000563573 HSPA1LP34931 641 aa5.96□□□□□ -1.46
CDR2-203ENST00000563573 CDK8P49336 464 aa5.96□□□□□ -1.46
CDR2-203ENST00000563573 DAB2P98082 770 aa5.96□□□□□ -1.46
CDR2-203ENST00000563573 ZNF124Q15973 351 aa5.96□□□□□ -1.46
CDR2-203ENST00000563573 MAP3K11Q16584 847 aa5.96□□□□□ -1.46
CDR2-203ENST00000563573 MEX3CQ5U5Q3 659 aaKnown RBP5.96□□□□□ -1.46
CDR2-203ENST00000563573 MPZL3Q6UWV2 235 aa5.96□□□□□ -1.46
CDR2-203ENST00000563573 CDH24Q86UP0 819 aa5.96□□□□□ -1.46
CDR2-203ENST00000563573 USHBP1Q8N6Y0 703 aa5.96□□□□□ -1.46
CDR2-203ENST00000563573 XAGE3Q8WTP9 111 aa5.96□□□□□ -1.46
CDR2-203ENST00000563573 PHACTR3Q96KR7 559 aa5.96□□□□□ -1.46
CDR2-203ENST00000563573 ZSWIM5Q9P217 1185 aa5.96□□□□□ -1.46
CDR2-203ENST00000563573 PARP2Q9UGN5 583 aa5.96□□□□□ -1.46
CDR2-203ENST00000563573 CEP131Q9UPN4 1083 aa5.96□□□□□ -1.46
CDR2-203ENST00000563573 RRP7AQ9Y3A4 280 aaKnown RBP5.96□□□□□ -1.46
CDR2-203ENST00000563573 CNTNAP4Q9C0A0 1308 aa5.96□□□□□ -1.46
CDR2-203ENST00000563573 KDRP35968 1356 aa5.95□□□□□ -1.46
CDR2-203ENST00000563573 E9PSI1 815 aa5.95□□□□□ -1.46
CDR2-203ENST00000563573 TFE3P19532 575 aaPredicted RBP5.95□□□□□ -1.46
CDR2-203ENST00000563573 YARSP54577 528 aaKnown RBP5.95□□□□□ -1.46
CDR2-203ENST00000563573 TNK2Q07912 1038 aa5.95□□□□□ -1.46
CDR2-203ENST00000563573 MTHFSDQ2M296 383 aaKnown RBP5.95□□□□□ -1.46
CDR2-203ENST00000563573 C1orf141Q5JVX7 400 aa5.95□□□□□ -1.46
CDR2-203ENST00000563573 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.95□□□□□ -1.46
CDR2-203ENST00000563573 KCNH3Q9ULD8 1083 aa5.95□□□□□ -1.46
CDR2-203ENST00000563573 LMO7Q8WWI1 1683 aa5.94□□□□□ -1.46
CDR2-203ENST00000563573 CAMTA1Q9Y6Y1 1673 aa5.94□□□□□ -1.46
CDR2-203ENST00000563573 NWD2Q9ULI1 1742 aa5.94□□□□□ -1.46
CDR2-203ENST00000563573 RAP1GAPP47736 663 aa5.94□□□□□ -1.46
CDR2-203ENST00000563573 GNAI1P63096 354 aa5.94□□□□□ -1.46
CDR2-203ENST00000563573 PWP1Q13610 501 aa5.94□□□□□ -1.46
CDR2-203ENST00000563573 MEI1Q5TIA1 1274 aa5.94□□□□□ -1.46
CDR2-203ENST00000563573 FYB2Q5VWT5 728 aa5.94□□□□□ -1.46
CDR2-203ENST00000563573 TMC4Q7Z404 712 aa5.94□□□□□ -1.46
CDR2-203ENST00000563573 JARID2Q92833 1246 aaPredicted RBP5.94□□□□□ -1.46
CDR2-203ENST00000563573 LIN37Q96GY3 246 aaPredicted RBP5.94□□□□□ -1.46
CDR2-203ENST00000563573 C8orf37Q96NL8 207 aa5.94□□□□□ -1.46
CDR2-203ENST00000563573 TOX2Q96NM4 488 aa5.94□□□□□ -1.46
CDR2-203ENST00000563573 MYH16Q9H6N6 1097 aa5.94□□□□□ -1.46
CDR2-203ENST00000563573 THRAP3Q9Y2W1 955 aaKnown RBP5.94□□□□□ -1.46
CDR2-203ENST00000563573 CCDC9Q9Y3X0 531 aaKnown RBP5.94□□□□□ -1.46
CDR2-203ENST00000563573 LAS1LQ9Y4W2 734 aaKnown RBP5.94□□□□□ -1.46
CDR2-203ENST00000563573 PLCH1Q4KWH8 1693 aa5.94□□□□□ -1.46
CDR2-203ENST00000563573 IL16Q14005 1332 aa5.94□□□□□ -1.46
CDR2-203ENST00000563573 CRB1P82279 1406 aa5.93□□□□□ -1.46
CDR2-203ENST00000563573 VIRMAQ69YN4 1812 aaKnown RBP5.93□□□□□ -1.46
CDR2-203ENST00000563573 EXOC5O00471 708 aa5.93□□□□□ -1.46
CDR2-203ENST00000563573 TSPAN15O95858 294 aa5.93□□□□□ -1.46
CDR2-203ENST00000563573 HSP90AB1P08238 724 aaKnown RBP5.93□□□□□ -1.46
CDR2-203ENST00000563573 IL2RBP14784 551 aa5.93□□□□□ -1.46
CDR2-203ENST00000563573 ERCC3P19447 782 aa5.93□□□□□ -1.46
CDR2-203ENST00000563573 SLFN5Q08AF3 891 aa5.93□□□□□ -1.46
CDR2-203ENST00000563573 ZNF530Q6P9A1 599 aaPredicted RBP5.93□□□□□ -1.46
CDR2-203ENST00000563573 TTC6Q86TZ1 520 aa5.93□□□□□ -1.46
CDR2-203ENST00000563573 RELL1Q8IUW5 271 aa5.93□□□□□ -1.46
CDR2-203ENST00000563573 UNC5CLQ8IV45 518 aa5.93□□□□□ -1.46
CDR2-203ENST00000563573 IFNL2Q8IZJ0 200 aa5.93□□□□□ -1.46
CDR2-203ENST00000563573 PHC3Q8NDX5 983 aa5.93□□□□□ -1.46
CDR2-203ENST00000563573 ZCRB1Q8TBF4 217 aaKnown RBP5.93□□□□□ -1.46
CDR2-203ENST00000563573 CYB5D2Q8WUJ1 264 aa5.93□□□□□ -1.46
CDR2-203ENST00000563573 SYTL4Q96C24 671 aaPredicted RBP5.93□□□□□ -1.46
CDR2-203ENST00000563573 CRELD1Q96HD1 420 aa5.93□□□□□ -1.46
CDR2-203ENST00000563573 C19orf73Q9NVV2 129 aa5.93□□□□□ -1.46
CDR2-203ENST00000563573 GPATCH2Q9NW75 528 aa5.93□□□□□ -1.46
CDR2-203ENST00000563573 SLAMF8Q9P0V8 285 aa5.93□□□□□ -1.46
CDR2-203ENST00000563573 USP35Q9P2H5 1018 aa5.93□□□□□ -1.46
CDR2-203ENST00000563573 COL5A2P05997 1499 aaPredicted RBP5.93□□□□□ -1.46
CDR2-203ENST00000563573 PARP4Q9UKK3 1724 aaKnown RBP5.93□□□□□ -1.46
CDR2-203ENST00000563573 PLEKHG2Q9H7P9 1386 aa5.93□□□□□ -1.46
CDR2-203ENST00000563573 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.92□□□□□ -1.46
CDR2-203ENST00000563573 PLCG1P19174 1290 aa5.92□□□□□ -1.46
CDR2-203ENST00000563573 LMNB2Q03252 620 aa5.92□□□□□ -1.46
CDR2-203ENST00000563573 TEFQ10587 303 aa5.92□□□□□ -1.46
CDR2-203ENST00000563573 TMEM201Q5SNT2 666 aa5.92□□□□□ -1.46
CDR2-203ENST00000563573 FBXO15Q8NCQ5 510 aaPredicted RBP5.92□□□□□ -1.46
CDR2-203ENST00000563573 DNAJB8Q8NHS0 232 aa5.92□□□□□ -1.46
CDR2-203ENST00000563573 ABHD4Q8TB40 342 aa5.92□□□□□ -1.46
CDR2-203ENST00000563573 ZSCAN18Q8TBC5 510 aaPredicted RBP5.92□□□□□ -1.46
CDR2-203ENST00000563573 ACSF2Q96CM8 615 aaPredicted RBP5.92□□□□□ -1.46
CDR2-203ENST00000563573 GPR62Q9BZJ7 368 aa5.92□□□□□ -1.46
CDR2-203ENST00000563573 TMEM59LQ9UK28 342 aa5.92□□□□□ -1.46
CDR2-203ENST00000563573 ZNF521Q96K83 1311 aa5.92□□□□□ -1.46
CDR2-203ENST00000563573 NCAPD2Q15021 1401 aa5.91□□□□□ -1.46
CDR2-203ENST00000563573 SORBS3O60504 671 aa5.91□□□□□ -1.46
CDR2-203ENST00000563573 CILPO75339 1184 aa5.91□□□□□ -1.46
CDR2-203ENST00000563573 ESR1P03372 595 aa5.91□□□□□ -1.46
CDR2-203ENST00000563573 TPP2P29144 1249 aaPredicted RBP5.91□□□□□ -1.46
CDR2-203ENST00000563573 CAMK2GQ13555 558 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms