RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 IRS2Q9Y4H2 1338 aa5.55□□□□□ -1.52
HMGB1P33-201ENST00000563485 ZC3H12DA2A288 527 aaKnown RBP5.55□□□□□ -1.52
HMGB1P33-201ENST00000563485 F8W031 263 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P33-201ENST00000563485 SMAD7O15105 426 aaKnown RBP5.55□□□□□ -1.52
HMGB1P33-201ENST00000563485 KCNH1O95259 989 aa5.55□□□□□ -1.52
HMGB1P33-201ENST00000563485 CNKSR3Q6P9H4 555 aa5.55□□□□□ -1.52
HMGB1P33-201ENST00000563485 LILRA6Q6PI73 481 aa5.55□□□□□ -1.52
HMGB1P33-201ENST00000563485 ZNF428Q96B54 188 aa5.55□□□□□ -1.52
HMGB1P33-201ENST00000563485 APBA2Q99767 749 aa5.55□□□□□ -1.52
HMGB1P33-201ENST00000563485 PARD6AQ9NPB6 346 aa5.55□□□□□ -1.52
HMGB1P33-201ENST00000563485 EMC9Q9Y3B6 208 aa5.55□□□□□ -1.52
HMGB1P33-201ENST00000563485 PPP1R11O60927 126 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P33-201ENST00000563485 SSBP05455 408 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMGB1P33-201ENST00000563485 GLI4P10075 376 aa5.54□□□□□ -1.52
HMGB1P33-201ENST00000563485 PAMP19021 973 aa5.54□□□□□ -1.52
HMGB1P33-201ENST00000563485 HOXA5P20719 270 aa5.54□□□□□ -1.52
HMGB1P33-201ENST00000563485 FBLN1P23142 703 aa5.54□□□□□ -1.52
HMGB1P33-201ENST00000563485 IGFBP6P24592 240 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P33-201ENST00000563485 LIMS1P48059 325 aa5.54□□□□□ -1.52
HMGB1P33-201ENST00000563485 PRR5P85299 388 aa5.54□□□□□ -1.52
HMGB1P33-201ENST00000563485 BVESQ8NE79 360 aa5.54□□□□□ -1.52
HMGB1P33-201ENST00000563485 ZCCHC4Q9H5U6 513 aa5.54□□□□□ -1.52
HMGB1P33-201ENST00000563485 CLEC1BQ9P126 229 aa5.54□□□□□ -1.52
HMGB1P33-201ENST00000563485 GULP1Q9UBP9 304 aa5.54□□□□□ -1.52
HMGB1P33-201ENST00000563485 RAPGEFL1Q9UHV5 662 aa5.54□□□□□ -1.52
HMGB1P33-201ENST00000563485 DBR1Q9UK59 544 aaKnown RBP5.54□□□□□ -1.52
HMGB1P33-201ENST00000563485 CCDC9Q9Y3X0 531 aaKnown RBP5.54□□□□□ -1.52
HMGB1P33-201ENST00000563485 NPHP3-ACAD11A0A0J9YXS1 232 aa5.53□□□□□ -1.52
HMGB1P33-201ENST00000563485 B2RBV5 119 aa5.53□□□□□ -1.52
HMGB1P33-201ENST00000563485 TCF3P15923 654 aa5.53□□□□□ -1.52
HMGB1P33-201ENST00000563485 ZNF143P52747 638 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P33-201ENST00000563485 SCRN1Q12765 414 aa5.53□□□□□ -1.52
HMGB1P33-201ENST00000563485 NCAPHQ15003 741 aa5.53□□□□□ -1.52
HMGB1P33-201ENST00000563485 LARP1BQ659C4 914 aaKnown RBP5.53□□□□□ -1.52
HMGB1P33-201ENST00000563485 MBLAC2Q68D91 279 aa5.53□□□□□ -1.52
HMGB1P33-201ENST00000563485 C6orf15Q6UXA7 325 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P33-201ENST00000563485 TRIM59Q8IWR1 403 aa5.53□□□□□ -1.52
HMGB1P33-201ENST00000563485 LZTR1Q8N653 840 aa5.53□□□□□ -1.52
HMGB1P33-201ENST00000563485 MARCH10Q8NA82 808 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P33-201ENST00000563485 PPP1R14AQ96A00 147 aa5.53□□□□□ -1.52
HMGB1P33-201ENST00000563485 PWWP2AQ96N64 755 aa5.53□□□□□ -1.52
HMGB1P33-201ENST00000563485 KCNC2Q96PR1 638 aa5.53□□□□□ -1.52
HMGB1P33-201ENST00000563485 BCAS3Q9H6U6 928 aa5.53□□□□□ -1.52
HMGB1P33-201ENST00000563485 GPRC5CQ9NQ84 441 aa5.53□□□□□ -1.52
HMGB1P33-201ENST00000563485 ACTR10Q9NZ32 417 aa5.53□□□□□ -1.52
HMGB1P33-201ENST00000563485 C7orf72A4D263 438 aa5.52□□□□□ -1.53
HMGB1P33-201ENST00000563485 NOP56O00567 594 aaKnown RBP5.52□□□□□ -1.53
HMGB1P33-201ENST00000563485 NAT2P11245 290 aa5.52□□□□□ -1.53
HMGB1P33-201ENST00000563485 PLS3P13797 630 aa5.52□□□□□ -1.53
HMGB1P33-201ENST00000563485 ATF2P15336 505 aa5.52□□□□□ -1.53
HMGB1P33-201ENST00000563485 PFKLP17858 780 aa5.52□□□□□ -1.53
HMGB1P33-201ENST00000563485 GTF2IRD2BQ6EKJ0 949 aa5.52□□□□□ -1.53
HMGB1P33-201ENST00000563485 GTF2IRD2Q86UP8 949 aa5.52□□□□□ -1.53
HMGB1P33-201ENST00000563485 VPS37DQ86XT2 251 aa5.52□□□□□ -1.53
HMGB1P33-201ENST00000563485 CRACR2BQ8N4Y2 399 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P33-201ENST00000563485 COPS5Q92905 334 aa5.52□□□□□ -1.53
HMGB1P33-201ENST00000563485 MRGPRX3Q96LB0 322 aa5.52□□□□□ -1.53
HMGB1P33-201ENST00000563485 C20orf173Q96LM9 149 aa5.52□□□□□ -1.53
HMGB1P33-201ENST00000563485 MTA3Q9BTC8 594 aa5.52□□□□□ -1.53
HMGB1P33-201ENST00000563485 TRBV23OR9-2A0A075B6M9 112 aa5.51□□□□□ -1.53
HMGB1P33-201ENST00000563485 A0A0G2JLL6 359 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P33-201ENST00000563485 TBX1O43435 398 aa5.51□□□□□ -1.53
HMGB1P33-201ENST00000563485 NPHS1O60500 1241 aa5.51□□□□□ -1.53
HMGB1P33-201ENST00000563485 THBDP07204 575 aa5.51□□□□□ -1.53
HMGB1P33-201ENST00000563485 ETFBP38117 255 aa5.51□□□□□ -1.53
HMGB1P33-201ENST00000563485 MC3RP41968 323 aa5.51□□□□□ -1.53
HMGB1P33-201ENST00000563485 CTSWP56202 376 aa5.51□□□□□ -1.53
HMGB1P33-201ENST00000563485 CYP4F3Q08477 520 aa5.51□□□□□ -1.53
HMGB1P33-201ENST00000563485 TARBP2Q15633 366 aaKnown RBP5.51□□□□□ -1.53
HMGB1P33-201ENST00000563485 TNNI3KQ59H18 835 aa5.51□□□□□ -1.53
HMGB1P33-201ENST00000563485 POMZP3Q6PJE2 187 aa5.51□□□□□ -1.53
HMGB1P33-201ENST00000563485 CABP7Q86V35 215 aa5.51□□□□□ -1.53
HMGB1P33-201ENST00000563485 FAM178BQ8IXR5 827 aa5.51□□□□□ -1.53
HMGB1P33-201ENST00000563485 BTN2A2Q8WVV5 523 aa5.51□□□□□ -1.53
HMGB1P33-201ENST00000563485 ALG3Q92685 438 aa5.51□□□□□ -1.53
HMGB1P33-201ENST00000563485 TINF2Q9BSI4 451 aa5.51□□□□□ -1.53
HMGB1P33-201ENST00000563485 PRKAG3Q9UGI9 489 aa5.51□□□□□ -1.53
HMGB1P33-201ENST00000563485 PLA2G1BP04054 148 aaKnown RBP5.5□□□□□ -1.53
HMGB1P33-201ENST00000563485 ASGR2P07307 311 aa5.5□□□□□ -1.53
HMGB1P33-201ENST00000563485 FGRP09769 529 aa5.5□□□□□ -1.53
HMGB1P33-201ENST00000563485 FOXO4P98177 505 aa5.5□□□□□ -1.53
HMGB1P33-201ENST00000563485 MRM1Q6IN84 353 aaKnown RBP5.5□□□□□ -1.53
HMGB1P33-201ENST00000563485 TP53I13Q8NBR0 393 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P33-201ENST00000563485 NETO2Q8NC67 525 aa5.5□□□□□ -1.53
HMGB1P33-201ENST00000563485 MICAL1Q8TDZ2 1067 aa5.5□□□□□ -1.53
HMGB1P33-201ENST00000563485 USP33Q8TEY7 942 aa5.5□□□□□ -1.53
HMGB1P33-201ENST00000563485 TSPAN17Q96FV3 270 aa5.5□□□□□ -1.53
HMGB1P33-201ENST00000563485 MMP19Q99542 508 aa5.5□□□□□ -1.53
HMGB1P33-201ENST00000563485 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB1P33-201ENST00000563485 NKX2-4Q9H2Z4 354 aa5.5□□□□□ -1.53
HMGB1P33-201ENST00000563485 SUSD5O60279 629 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 FUCA1P04066 466 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 ITGAVP06756 1048 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 PMLP29590 882 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 GNL2Q13823 731 aaKnown RBP5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 INF2Q27J81 1249 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 SV2CQ496J9 727 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 WWC2Q6AWC2 1192 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 ZNF227Q86WZ6 799 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 LINC01356Q8N9X3 169 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms