RNA–Protein interactions for RNA: ENST00000563456.1

TUBB8-203, Transcript of tubulin beta 8 class VIII, humanhuman

TSL 5

Gene TUBB8, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB8-203ENST00000563456 PDGFCQ9NRA1 345 aa15.3■□□□□ 0.04
TUBB8-203ENST00000563456 SCN10AQ9Y5Y9 1956 aa15.3■□□□□ 0.04
TUBB8-203ENST00000563456 SMAD4Q13485 552 aaKnown RBP15.29■□□□□ 0.04
TUBB8-203ENST00000563456 GPNMBQ14956 572 aa15.29■□□□□ 0.04
TUBB8-203ENST00000563456 CLUL1Q15846 466 aa15.29■□□□□ 0.04
TUBB8-203ENST00000563456 TCTN1Q2MV58 587 aa15.29■□□□□ 0.04
TUBB8-203ENST00000563456 COL26A1Q96A83 441 aa15.29■□□□□ 0.04
TUBB8-203ENST00000563456 MEIS3Q99687 375 aa15.29■□□□□ 0.04
TUBB8-203ENST00000563456 NSUN3Q9H649 340 aaKnown RBP15.29■□□□□ 0.04
TUBB8-203ENST00000563456 SH2D4AQ9H788 454 aa15.29■□□□□ 0.04
TUBB8-203ENST00000563456 IDH1O75874 414 aaKnown RBP15.28■□□□□ 0.04
TUBB8-203ENST00000563456 EEF2P13639 858 aaKnown RBP15.28■□□□□ 0.04
TUBB8-203ENST00000563456 COL9A2Q14055 689 aaPredicted RBP15.28■□□□□ 0.04
TUBB8-203ENST00000563456 CTC1Q2NKJ3 1217 aa15.28■□□□□ 0.04
TUBB8-203ENST00000563456 NBPF20Q3BBV1 942 aa15.28■□□□□ 0.04
TUBB8-203ENST00000563456 FRMD5Q7Z6J6 570 aa15.28■□□□□ 0.04
TUBB8-203ENST00000563456 CPXCR1Q8N123 301 aa15.28■□□□□ 0.04
TUBB8-203ENST00000563456 ANKRD35Q8N283 1001 aa15.28■□□□□ 0.04
TUBB8-203ENST00000563456 RETREG2Q8NC44 543 aa15.28■□□□□ 0.04
TUBB8-203ENST00000563456 NUP88Q99567 741 aaPredicted RBP15.28■□□□□ 0.04
TUBB8-203ENST00000563456 RIOK1Q9BRS2 568 aaKnown RBP15.28■□□□□ 0.04
TUBB8-203ENST00000563456 RALGAPA2Q2PPJ7 1873 aa15.27■□□□□ 0.04
TUBB8-203ENST00000563456 NCK2O43639 380 aa15.27■□□□□ 0.04
TUBB8-203ENST00000563456 DLX2Q07687 328 aaPredicted RBP15.27■□□□□ 0.04
TUBB8-203ENST00000563456 MCTP2Q6DN12 878 aa15.27■□□□□ 0.04
TUBB8-203ENST00000563456 FAM117BQ6P1L5 589 aa15.27■□□□□ 0.04
TUBB8-203ENST00000563456 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.27■□□□□ 0.04
TUBB8-203ENST00000563456 CRBNQ96SW2 442 aa15.27■□□□□ 0.04
TUBB8-203ENST00000563456 MCM9Q9NXL9 1143 aa15.27■□□□□ 0.04
TUBB8-203ENST00000563456 MICAL3Q7RTP6 2002 aa15.27■□□□□ 0.03
TUBB8-203ENST00000563456 BAZ2AQ9UIF9 1905 aaKnown RBP15.27■□□□□ 0.03
TUBB8-203ENST00000563456 SPTBN2O15020 2390 aa15.26■□□□□ 0.03
TUBB8-203ENST00000563456 RAD21O60216 631 aa15.26■□□□□ 0.03
TUBB8-203ENST00000563456 TAPT1Q6NXT6 567 aa15.26■□□□□ 0.03
TUBB8-203ENST00000563456 CERS3Q8IU89 383 aa15.26■□□□□ 0.03
TUBB8-203ENST00000563456 SLF1Q9BQI6 1058 aa15.26■□□□□ 0.03
TUBB8-203ENST00000563456 API5Q9BZZ5 524 aaKnown RBP15.26■□□□□ 0.03
TUBB8-203ENST00000563456 RAVER2Q9HCJ3 691 aaKnown RBP15.26■□□□□ 0.03
TUBB8-203ENST00000563456 NOB1Q9ULX3 412 aaKnown RBP15.26■□□□□ 0.03
TUBB8-203ENST00000563456 LOC730098B7Z3J9 87 aa15.25■□□□□ 0.03
TUBB8-203ENST00000563456 IGSF3O75054 1194 aa15.25■□□□□ 0.03
TUBB8-203ENST00000563456 MTX1Q13505 466 aa15.25■□□□□ 0.03
TUBB8-203ENST00000563456 FAM47CQ5HY64 1035 aa15.25■□□□□ 0.03
TUBB8-203ENST00000563456 CCDC158Q5M9N0 1113 aa15.25■□□□□ 0.03
TUBB8-203ENST00000563456 FAM133AQ8N9E0 248 aa15.25■□□□□ 0.03
TUBB8-203ENST00000563456 FAM208BQ5VWN6 2430 aa15.25■□□□□ 0.03
TUBB8-203ENST00000563456 H3BNC9 293 aa15.24■□□□□ 0.03
TUBB8-203ENST00000563456 ATP2A1O14983 1001 aa15.24■□□□□ 0.03
TUBB8-203ENST00000563456 TBX10O75333 385 aa15.24■□□□□ 0.03
TUBB8-203ENST00000563456 RARSP54136 660 aaKnown RBP15.24■□□□□ 0.03
TUBB8-203ENST00000563456 PURAQ00577 322 aaKnown RBP15.24■□□□□ 0.03
TUBB8-203ENST00000563456 BFSP2Q13515 415 aa15.24■□□□□ 0.03
TUBB8-203ENST00000563456 PUM1Q14671 1186 aaKnown RBP eCLIP15.24■□□□□ 0.03
TUBB8-203ENST00000563456 CBX2Q14781 532 aaPredicted RBP15.24■□□□□ 0.03
TUBB8-203ENST00000563456 ST3GAL2Q16842 350 aa15.24■□□□□ 0.03
TUBB8-203ENST00000563456 LRRFIP1Q32MZ4 808 aaKnown RBP15.24■□□□□ 0.03
TUBB8-203ENST00000563456 EPC2Q52LR7 807 aa15.24■□□□□ 0.03
TUBB8-203ENST00000563456 CNKSR3Q6P9H4 555 aa15.24■□□□□ 0.03
TUBB8-203ENST00000563456 EEPD1Q7L9B9 569 aa15.24■□□□□ 0.03
TUBB8-203ENST00000563456 ANTXR1Q9H6X2 564 aa15.24■□□□□ 0.03
TUBB8-203ENST00000563456 Q9Y3F1 56 aa15.24■□□□□ 0.03
TUBB8-203ENST00000563456 PDGFBP01127 241 aaPredicted RBP15.23■□□□□ 0.03
TUBB8-203ENST00000563456 MYL3P08590 195 aa15.23■□□□□ 0.03
TUBB8-203ENST00000563456 G3BP1Q13283 466 aaKnown RBP eCLIP15.23■□□□□ 0.03
TUBB8-203ENST00000563456 GPM6BQ13491 265 aa15.23■□□□□ 0.03
TUBB8-203ENST00000563456 TNNI3KQ59H18 835 aa15.23■□□□□ 0.03
TUBB8-203ENST00000563456 IQSEC1Q6DN90 963 aa15.23■□□□□ 0.03
TUBB8-203ENST00000563456 FBXO16Q8IX29 292 aaPredicted RBP15.23■□□□□ 0.03
TUBB8-203ENST00000563456 SDR42E1Q8WUS8 393 aa15.23■□□□□ 0.03
TUBB8-203ENST00000563456 ARHGAP45Q92619 1136 aa15.23■□□□□ 0.03
TUBB8-203ENST00000563456 ZNF512BQ96KM6 892 aaPredicted RBP15.23■□□□□ 0.03
TUBB8-203ENST00000563456 SAMD11Q96NU1 681 aa15.23■□□□□ 0.03
TUBB8-203ENST00000563456 GOPCQ9HD26 462 aa15.23■□□□□ 0.03
TUBB8-203ENST00000563456 CD207Q9UJ71 328 aa15.23■□□□□ 0.03
TUBB8-203ENST00000563456 HDAC5Q9UQL6 1122 aa15.23■□□□□ 0.03
TUBB8-203ENST00000563456 INSL6Q9Y581 213 aa15.23■□□□□ 0.03
TUBB8-203ENST00000563456 FPGT-TNNI3KV9GXZ4 949 aa15.23■□□□□ 0.03
TUBB8-203ENST00000563456 ANKRD11Q6UB99 2663 aaPredicted RBP15.23■□□□□ 0.03
TUBB8-203ENST00000563456 LCTP09848 1927 aa15.23■□□□□ 0.03
TUBB8-203ENST00000563456 ABHD14A-ACY1A0A1B0GW23 586 aa15.22■□□□□ 0.03
TUBB8-203ENST00000563456 SP7Q8TDD2 431 aaPredicted RBP15.22■□□□□ 0.03
TUBB8-203ENST00000563456 DCP1AQ9NPI6 582 aaPredicted RBP15.22■□□□□ 0.03
TUBB8-203ENST00000563456 HOMER2Q9NSB8 354 aa15.22■□□□□ 0.03
TUBB8-203ENST00000563456 POLR3EQ9NVU0 708 aa15.22■□□□□ 0.03
TUBB8-203ENST00000563456 SWAP70Q9UH65 585 aa15.22■□□□□ 0.03
TUBB8-203ENST00000563456 FASNP49327 2511 aaKnown RBP15.21■□□□□ 0.03
TUBB8-203ENST00000563456 MAGEB6P1A0A0J9YX57 407 aa15.21■□□□□ 0.03
TUBB8-203ENST00000563456 NBNO60934 754 aa15.21■□□□□ 0.03
TUBB8-203ENST00000563456 MKRN4PQ13434 485 aaPredicted RBP15.21■□□□□ 0.03
TUBB8-203ENST00000563456 PRPF38AQ8NAV1 312 aaKnown RBP15.21■□□□□ 0.03
TUBB8-203ENST00000563456 CHST13Q8NET6 341 aa15.21■□□□□ 0.03
TUBB8-203ENST00000563456 AFAP1L1Q8TED9 768 aa15.21■□□□□ 0.03
TUBB8-203ENST00000563456 CTAGE1Q96RT6 745 aa15.21■□□□□ 0.03
TUBB8-203ENST00000563456 FBXO40Q9UH90 709 aa15.21■□□□□ 0.03
TUBB8-203ENST00000563456 CYP2D7A0A087X1C5 515 aa15.2■□□□□ 0.02
TUBB8-203ENST00000563456 PNMA6EA0A0J9YXQ4 647 aa15.2■□□□□ 0.02
TUBB8-203ENST00000563456 ASB14A6NK59 587 aa15.2■□□□□ 0.02
TUBB8-203ENST00000563456 EFCAB14O75071 495 aa15.2■□□□□ 0.02
TUBB8-203ENST00000563456 ZBED4O75132 1171 aa15.2■□□□□ 0.02
TUBB8-203ENST00000563456 CXCL10P02778 98 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms