RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-205ENST00000563293 PSMC6P62333 389 aa11.07□□□□□ -0.64
RPAP1-205ENST00000563293 CNTN2Q02246 1040 aa11.07□□□□□ -0.64
RPAP1-205ENST00000563293 TTLL4Q14679 1199 aa11.07□□□□□ -0.64
RPAP1-205ENST00000563293 RABEP1Q15276 862 aa11.07□□□□□ -0.64
RPAP1-205ENST00000563293 PPP2R2DQ66LE6 453 aa11.07□□□□□ -0.64
RPAP1-205ENST00000563293 CCDC174Q6PII3 467 aa11.07□□□□□ -0.64
RPAP1-205ENST00000563293 C16orf86Q6ZW13 317 aa11.07□□□□□ -0.64
RPAP1-205ENST00000563293 ARMCX2Q7L311 632 aa11.07□□□□□ -0.64
RPAP1-205ENST00000563293 SPRED2Q7Z698 418 aa11.07□□□□□ -0.64
RPAP1-205ENST00000563293 CCDC144CPQ8IYA2 1237 aa11.07□□□□□ -0.64
RPAP1-205ENST00000563293 PCSK9Q8NBP7 692 aaKnown RBP11.07□□□□□ -0.64
RPAP1-205ENST00000563293 SLF1Q9BQI6 1058 aa11.07□□□□□ -0.64
RPAP1-205ENST00000563293 NOC4LQ9BVI4 516 aaKnown RBP11.07□□□□□ -0.64
RPAP1-205ENST00000563293 TEX13BQ9BXU2 312 aa11.07□□□□□ -0.64
RPAP1-205ENST00000563293 HIPK3Q9H422 1215 aa11.07□□□□□ -0.64
RPAP1-205ENST00000563293 SH2D4AQ9H788 454 aa11.07□□□□□ -0.64
RPAP1-205ENST00000563293 CNNM2Q9H8M5 875 aa11.07□□□□□ -0.64
RPAP1-205ENST00000563293 KANSL2Q9H9L4 492 aa11.07□□□□□ -0.64
RPAP1-205ENST00000563293 RAVER2Q9HCJ3 691 aaKnown RBP11.07□□□□□ -0.64
RPAP1-205ENST00000563293 GREB1LQ9C091 1923 aaPredicted RBP11.06□□□□□ -0.64
RPAP1-205ENST00000563293 FOXP2O15409 715 aa11.06□□□□□ -0.64
RPAP1-205ENST00000563293 B4GALT4O60513 344 aa11.06□□□□□ -0.64
RPAP1-205ENST00000563293 CYP21A2P08686 494 aa11.06□□□□□ -0.64
RPAP1-205ENST00000563293 TRDNQ13061 729 aa11.06□□□□□ -0.64
RPAP1-205ENST00000563293 SKIV2LQ15477 1246 aaKnown RBP11.06□□□□□ -0.64
RPAP1-205ENST00000563293 CTR9Q6PD62 1173 aa11.06□□□□□ -0.64
RPAP1-205ENST00000563293 ZNF467Q7Z7K2 595 aaPredicted RBP11.06□□□□□ -0.64
RPAP1-205ENST00000563293 STK11IPQ8N1F8 1099 aa11.06□□□□□ -0.64
RPAP1-205ENST00000563293 CCDC17Q96LX7 622 aa11.06□□□□□ -0.64
RPAP1-205ENST00000563293 AGBL1Q96MI9 1066 aa11.06□□□□□ -0.64
RPAP1-205ENST00000563293 MTA3Q9BTC8 594 aa11.06□□□□□ -0.64
RPAP1-205ENST00000563293 ABHD16BQ9H3Z7 469 aa11.06□□□□□ -0.64
RPAP1-205ENST00000563293 GOPCQ9HD26 462 aa11.06□□□□□ -0.64
RPAP1-205ENST00000563293 CD320Q9NPF0 282 aa11.06□□□□□ -0.64
RPAP1-205ENST00000563293 TSHZ2Q9NRE2 1034 aa11.06□□□□□ -0.64
RPAP1-205ENST00000563293 F5H6K3 240 aa11.05□□□□□ -0.64
RPAP1-205ENST00000563293 TLR3O15455 904 aaKnown RBP11.05□□□□□ -0.64
RPAP1-205ENST00000563293 NDUFB10O96000 172 aa11.05□□□□□ -0.64
RPAP1-205ENST00000563293 CA3P07451 260 aa11.05□□□□□ -0.64
RPAP1-205ENST00000563293 MCM2P49736 904 aa11.05□□□□□ -0.64
RPAP1-205ENST00000563293 NKX3-2P78367 333 aa11.05□□□□□ -0.64
RPAP1-205ENST00000563293 KLRC3Q07444 240 aa11.05□□□□□ -0.64
RPAP1-205ENST00000563293 PPARAQ07869 468 aa11.05□□□□□ -0.64
RPAP1-205ENST00000563293 ITGA7Q13683 1181 aa11.05□□□□□ -0.64
RPAP1-205ENST00000563293 PPP1R13LQ8WUF5 828 aa11.05□□□□□ -0.64
RPAP1-205ENST00000563293 KRT23Q9C075 422 aa11.05□□□□□ -0.64
RPAP1-205ENST00000563293 PDGFCQ9NRA1 345 aa11.05□□□□□ -0.64
RPAP1-205ENST00000563293 GNEQ9Y223 722 aaKnown RBP11.05□□□□□ -0.64
RPAP1-205ENST00000563293 PCDHA11Q9Y5I1 949 aa11.05□□□□□ -0.64
RPAP1-205ENST00000563293 SNX14Q9Y5W7 946 aa11.05□□□□□ -0.64
RPAP1-205ENST00000563293 SLC4A7Q9Y6M7 1214 aa11.05□□□□□ -0.64
RPAP1-205ENST00000563293 TET1Q8NFU7 2136 aa11.05□□□□□ -0.64
RPAP1-205ENST00000563293 LRRC37A2A6NM11 1700 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 SOWAHBA6NEL2 793 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 ZBBXA8MT70 800 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 ATP2A1O14983 1001 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 ST18O60284 1047 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 FGRP09769 529 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 ATP2A2P16615 1042 aaKnown RBP11.04□□□□□ -0.64
RPAP1-205ENST00000563293 SMPD1P17405 629 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 COPB2P35606 906 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 ANP32AP39687 249 aaKnown RBP11.04□□□□□ -0.64
RPAP1-205ENST00000563293 TNFAIP2Q03169 654 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 PDE4BQ07343 736 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 MFSD6Q6ZSS7 791 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 ANKRD35Q8N283 1001 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 NCOA7Q8NI08 942 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 STAG1Q8WVM7 1258 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 KIFC2Q96AC6 838 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 NEK1Q96PY6 1258 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 TSPYL2Q9H2G4 693 aaPredicted RBP11.04□□□□□ -0.64
RPAP1-205ENST00000563293 SPC25Q9HBM1 224 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 SLC38A10Q9HBR0 1119 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 EPB41L4AQ9HCS5 686 aaPredicted RBP11.04□□□□□ -0.64
RPAP1-205ENST00000563293 HOMER2Q9NSB8 354 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 TRMT13Q9NUP7 481 aaKnown RBP11.04□□□□□ -0.64
RPAP1-205ENST00000563293 CYP46A1Q9Y6A2 500 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 WDR19Q8NEZ3 1342 aa11.04□□□□□ -0.64
RPAP1-205ENST00000563293 TRIOO75962 3097 aa11.03□□□□□ -0.64
RPAP1-205ENST00000563293 MINDY4BA8MYZ0 360 aa11.03□□□□□ -0.64
RPAP1-205ENST00000563293 DYNC1LI2O43237 492 aaPredicted RBP11.03□□□□□ -0.64
RPAP1-205ENST00000563293 CYP2C9P11712 490 aa11.03□□□□□ -0.64
RPAP1-205ENST00000563293 POU3F3P20264 500 aaPredicted RBP11.03□□□□□ -0.64
RPAP1-205ENST00000563293 RASA1P20936 1047 aa11.03□□□□□ -0.64
RPAP1-205ENST00000563293 ANKRD1Q15327 319 aa11.03□□□□□ -0.64
RPAP1-205ENST00000563293 FSCN1Q16658 493 aaKnown RBP11.03□□□□□ -0.64
RPAP1-205ENST00000563293 TMEM31Q5JXX7 168 aa11.03□□□□□ -0.64
RPAP1-205ENST00000563293 BLOC1S2Q6QNY1 142 aa11.03□□□□□ -0.64
RPAP1-205ENST00000563293 NOL8Q76FK4 1167 aaKnown RBP11.03□□□□□ -0.64
RPAP1-205ENST00000563293 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.03□□□□□ -0.64
RPAP1-205ENST00000563293 DEFB128Q7Z7B8 93 aa11.03□□□□□ -0.64
RPAP1-205ENST00000563293 RALYLQ86SE5 291 aaKnown RBP11.03□□□□□ -0.64
RPAP1-205ENST00000563293 ALYREFQ86V81 257 aaKnown RBP11.03□□□□□ -0.64
RPAP1-205ENST00000563293 RASEFQ8IZ41 740 aa11.03□□□□□ -0.64
RPAP1-205ENST00000563293 FBXL16Q8N461 479 aa11.03□□□□□ -0.64
RPAP1-205ENST00000563293 FAM133AQ8N9E0 248 aa11.03□□□□□ -0.64
RPAP1-205ENST00000563293 PRPF38AQ8NAV1 312 aaKnown RBP11.03□□□□□ -0.64
RPAP1-205ENST00000563293 CHMP4CQ96CF2 233 aa11.03□□□□□ -0.64
RPAP1-205ENST00000563293 PURBQ96QR8 312 aaKnown RBP11.03□□□□□ -0.64
RPAP1-205ENST00000563293 ALDH8A1Q9H2A2 487 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms