RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 POTEMA6NI47 508 aa21.53■■□□□ 1.04
SMPD3-203ENST00000563226 BMP3P12645 472 aa21.53■■□□□ 1.04
SMPD3-203ENST00000563226 PRCPP42785 496 aa21.53■■□□□ 1.04
SMPD3-203ENST00000563226 FXR2P51116 673 aaKnown RBP eCLIP21.53■■□□□ 1.04
SMPD3-203ENST00000563226 KIAA1755Q5JYT7 1200 aa21.53■■□□□ 1.04
SMPD3-203ENST00000563226 PPP4R3AQ6IN85 833 aa21.53■■□□□ 1.04
SMPD3-203ENST00000563226 ACER1Q8TDN7 264 aa21.53■■□□□ 1.04
SMPD3-203ENST00000563226 P2RX7Q99572 595 aaKnown RBP21.53■■□□□ 1.04
SMPD3-203ENST00000563226 IKQ13123 557 aaPredicted RBP21.52■■□□□ 1.04
SMPD3-203ENST00000563226 GRB10Q13322 594 aa21.52■■□□□ 1.04
SMPD3-203ENST00000563226 SYDE2Q5VT97 1194 aa21.52■■□□□ 1.04
SMPD3-203ENST00000563226 VPS33BQ9H267 617 aa21.52■■□□□ 1.04
SMPD3-203ENST00000563226 DDX25Q9UHL0 483 aaKnown RBP21.52■■□□□ 1.04
SMPD3-203ENST00000563226 A0A1B0GTH6 734 aa21.52■■□□□ 1.04
SMPD3-203ENST00000563226 NR1I3Q14994 352 aa21.52■■□□□ 1.04
SMPD3-203ENST00000563226 TPD52L1Q16890 204 aaPredicted RBP21.52■■□□□ 1.04
SMPD3-203ENST00000563226 AGBL3Q8NEM8 1001 aa21.52■■□□□ 1.04
SMPD3-203ENST00000563226 NELFBQ8WX92 580 aa21.52■■□□□ 1.04
SMPD3-203ENST00000563226 CUEDC2Q9H467 287 aa21.52■■□□□ 1.04
SMPD3-203ENST00000563226 LRWD1Q9UFC0 647 aa21.52■■□□□ 1.04
SMPD3-203ENST00000563226 RWDD2AQ9UIY3 292 aa21.52■■□□□ 1.04
SMPD3-203ENST00000563226 UQCRHLA0A096LP55 91 aa21.51■■□□□ 1.03
SMPD3-203ENST00000563226 TEX33O43247 280 aa21.51■■□□□ 1.03
SMPD3-203ENST00000563226 UQCRHP07919 91 aa21.51■■□□□ 1.03
SMPD3-203ENST00000563226 PAK1Q13153 545 aa21.51■■□□□ 1.03
SMPD3-203ENST00000563226 TBX2Q13207 712 aaPredicted RBP21.51■■□□□ 1.03
SMPD3-203ENST00000563226 USH1GQ495M9 461 aa21.51■■□□□ 1.03
SMPD3-203ENST00000563226 HAS1Q92839 578 aa21.51■■□□□ 1.03
SMPD3-203ENST00000563226 PNMA5Q96PV4 448 aa21.51■■□□□ 1.03
SMPD3-203ENST00000563226 NUDT12Q9BQG2 462 aa21.51■■□□□ 1.03
SMPD3-203ENST00000563226 SCAF8Q9UPN6 1271 aaKnown RBP21.51■■□□□ 1.03
SMPD3-203ENST00000563226 MEIS2O14770 477 aa21.51■■□□□ 1.03
SMPD3-203ENST00000563226 TPM2P07951 284 aa21.51■■□□□ 1.03
SMPD3-203ENST00000563226 TGFB2P61812 414 aa21.51■■□□□ 1.03
SMPD3-203ENST00000563226 KCNB1Q14721 858 aa21.51■■□□□ 1.03
SMPD3-203ENST00000563226 NBPF9Q3BBW0 867 aa21.51■■□□□ 1.03
SMPD3-203ENST00000563226 MIGA2Q7L4E1 593 aa21.51■■□□□ 1.03
SMPD3-203ENST00000563226 MTMR14Q8NCE2 650 aa21.51■■□□□ 1.03
SMPD3-203ENST00000563226 UIMC1Q96RL1 719 aa21.51■■□□□ 1.03
SMPD3-203ENST00000563226 TRMT1Q9NXH9 659 aaKnown RBP21.51■■□□□ 1.03
SMPD3-203ENST00000563226 ZBTB21Q9ULJ3 1066 aa21.51■■□□□ 1.03
SMPD3-203ENST00000563226 MYL1P05976 194 aa21.5■■□□□ 1.03
SMPD3-203ENST00000563226 DHX8Q14562 1220 aaKnown RBP21.5■■□□□ 1.03
SMPD3-203ENST00000563226 TMEM266Q2M3C6 531 aa21.5■■□□□ 1.03
SMPD3-203ENST00000563226 ADSSL1Q8N142 457 aa21.5■■□□□ 1.03
SMPD3-203ENST00000563226 ZBED3Q96IU2 234 aaPredicted RBP21.5■■□□□ 1.03
SMPD3-203ENST00000563226 AMNQ9BXJ7 453 aa21.5■■□□□ 1.03
SMPD3-203ENST00000563226 ANO3Q9BYT9 981 aa21.5■■□□□ 1.03
SMPD3-203ENST00000563226 TRIM9Q9C026 710 aa21.5■■□□□ 1.03
SMPD3-203ENST00000563226 MAGEF1Q9HAY2 307 aa21.5■■□□□ 1.03
SMPD3-203ENST00000563226 RHOBTB3O94955 611 aa21.49■■□□□ 1.03
SMPD3-203ENST00000563226 DALRD3Q5D0E6 543 aaKnown RBP21.49■■□□□ 1.03
SMPD3-203ENST00000563226 BTNL9Q6UXG8 535 aa21.49■■□□□ 1.03
SMPD3-203ENST00000563226 FBXO11Q86XK2 927 aa21.49■■□□□ 1.03
SMPD3-203ENST00000563226 CCAR2Q8N163 923 aaKnown RBP21.49■■□□□ 1.03
SMPD3-203ENST00000563226 CALML4Q96GE6 196 aa21.49■■□□□ 1.03
SMPD3-203ENST00000563226 BLOC1S4Q9NUP1 217 aa21.49■■□□□ 1.03
SMPD3-203ENST00000563226 TRIM49BA6NDI0 452 aa21.49■■□□□ 1.03
SMPD3-203ENST00000563226 WNT10BO00744 389 aa21.49■■□□□ 1.03
SMPD3-203ENST00000563226 E4F1Q66K89 784 aaPredicted RBP21.49■■□□□ 1.03
SMPD3-203ENST00000563226 SPECC1LQ69YQ0 1117 aa21.49■■□□□ 1.03
SMPD3-203ENST00000563226 TAOK3Q9H2K8 898 aa21.49■■□□□ 1.03
SMPD3-203ENST00000563226 ADD3Q9UEY8 706 aaKnown RBP21.49■■□□□ 1.03
SMPD3-203ENST00000563226 PGAP2Q9UHJ9 254 aa21.49■■□□□ 1.03
SMPD3-203ENST00000563226 NFKBIEO00221 500 aa21.48■■□□□ 1.03
SMPD3-203ENST00000563226 PMS1P54277 932 aaKnown RBP21.48■■□□□ 1.03
SMPD3-203ENST00000563226 FKBP1CQ5VVH2 108 aa21.48■■□□□ 1.03
SMPD3-203ENST00000563226 FBXO41Q8TF61 875 aa21.48■■□□□ 1.03
SMPD3-203ENST00000563226 C7orf25Q9BPX7 421 aa21.48■■□□□ 1.03
SMPD3-203ENST00000563226 ARHGEF10LQ9HCE6 1279 aa21.48■■□□□ 1.03
SMPD3-203ENST00000563226 PRR12Q9ULL5 1215 aa21.48■■□□□ 1.03
SMPD3-203ENST00000563226 TNNT1P13805 278 aa21.48■■□□□ 1.03
SMPD3-203ENST00000563226 PDIA5Q14554 519 aa21.48■■□□□ 1.03
SMPD3-203ENST00000563226 CIAPIN1Q6FI81 312 aa21.48■■□□□ 1.03
SMPD3-203ENST00000563226 GIMAP8Q8ND71 665 aaPredicted RBP21.48■■□□□ 1.03
SMPD3-203ENST00000563226 SNX29Q8TEQ0 813 aa21.48■■□□□ 1.03
SMPD3-203ENST00000563226 GLT8D2Q9H1C3 349 aa21.48■■□□□ 1.03
SMPD3-203ENST00000563226 TMX1Q9H3N1 280 aa21.48■■□□□ 1.03
SMPD3-203ENST00000563226 PPP1R1BQ9UD71 204 aaPredicted RBP21.48■■□□□ 1.03
SMPD3-203ENST00000563226 TMX2Q9Y320 296 aa21.48■■□□□ 1.03
SMPD3-203ENST00000563226 OPLAHO14841 1288 aa21.47■■□□□ 1.03
SMPD3-203ENST00000563226 GCFC2P16383 781 aaKnown RBP21.47■■□□□ 1.03
SMPD3-203ENST00000563226 ASIC1P78348 528 aa21.47■■□□□ 1.03
SMPD3-203ENST00000563226 MCM6Q14566 821 aa21.47■■□□□ 1.03
SMPD3-203ENST00000563226 ECM1Q16610 540 aa21.47■■□□□ 1.03
SMPD3-203ENST00000563226 FAM83BQ5T0W9 1011 aa21.47■■□□□ 1.03
SMPD3-203ENST00000563226 PRIMPOLQ96LW4 560 aa21.47■■□□□ 1.03
SMPD3-203ENST00000563226 KCND1Q9NSA2 647 aa21.47■■□□□ 1.03
SMPD3-203ENST00000563226 EGFRP00533 1210 aa21.46■■□□□ 1.03
SMPD3-203ENST00000563226 KRT31Q15323 416 aa21.46■■□□□ 1.03
SMPD3-203ENST00000563226 KCNK18Q7Z418 384 aa21.46■■□□□ 1.03
SMPD3-203ENST00000563226 CCDC84Q86UT8 332 aaPredicted RBP21.46■■□□□ 1.03
SMPD3-203ENST00000563226 FAM83AQ86UY5 434 aa21.46■■□□□ 1.03
SMPD3-203ENST00000563226 TMEM139Q8IV31 216 aa21.46■■□□□ 1.03
SMPD3-203ENST00000563226 MYOZ2Q9NPC6 264 aa21.46■■□□□ 1.03
SMPD3-203ENST00000563226 SYNPO2Q9UMS6 1093 aa21.46■■□□□ 1.03
SMPD3-203ENST00000563226 CCT6AP40227 531 aaKnown RBP21.46■■□□□ 1.03
SMPD3-203ENST00000563226 ZYXQ15942 572 aaKnown RBP21.46■■□□□ 1.03
SMPD3-203ENST00000563226 NYAP1Q6ZVC0 841 aa21.46■■□□□ 1.03
SMPD3-203ENST00000563226 TC2NQ8N9U0 490 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms