RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 AKT3Q9Y243 479 aa7.25□□□□□ -1.25
CHD9-206ENST00000562791 RWDD3Q9Y3V2 267 aa7.25□□□□□ -1.25
CHD9-206ENST00000562791 IRS2Q9Y4H2 1338 aa7.25□□□□□ -1.25
CHD9-206ENST00000562791 A0A1W2PQJ5 194 aa7.24□□□□□ -1.25
CHD9-206ENST00000562791 ZC3H12DA2A288 527 aaKnown RBP7.24□□□□□ -1.25
CHD9-206ENST00000562791 PPP1R11O60927 126 aaPredicted RBP7.24□□□□□ -1.25
CHD9-206ENST00000562791 GLI4P10075 376 aa7.24□□□□□ -1.25
CHD9-206ENST00000562791 BMP7P18075 431 aa7.24□□□□□ -1.25
CHD9-206ENST00000562791 IGFBP6P24592 240 aaPredicted RBP7.24□□□□□ -1.25
CHD9-206ENST00000562791 LIMS1P48059 325 aa7.24□□□□□ -1.25
CHD9-206ENST00000562791 MBLAC2Q68D91 279 aa7.24□□□□□ -1.25
CHD9-206ENST00000562791 KCNC2Q96PR1 638 aa7.24□□□□□ -1.25
CHD9-206ENST00000562791 CAPN10Q9HC96 672 aa7.24□□□□□ -1.25
CHD9-206ENST00000562791 GULP1Q9UBP9 304 aa7.24□□□□□ -1.25
CHD9-206ENST00000562791 EMC9Q9Y3B6 208 aa7.24□□□□□ -1.25
CHD9-206ENST00000562791 F8W031 263 aaPredicted RBP7.23□□□□□ -1.25
CHD9-206ENST00000562791 TCF3P15923 654 aa7.23□□□□□ -1.25
CHD9-206ENST00000562791 HOXA5P20719 270 aa7.23□□□□□ -1.25
CHD9-206ENST00000562791 CYP4F3Q08477 520 aa7.23□□□□□ -1.25
CHD9-206ENST00000562791 CNKSR3Q6P9H4 555 aa7.23□□□□□ -1.25
CHD9-206ENST00000562791 LILRA6Q6PI73 481 aa7.23□□□□□ -1.25
CHD9-206ENST00000562791 C6orf15Q6UXA7 325 aaPredicted RBP7.23□□□□□ -1.25
CHD9-206ENST00000562791 BVESQ8NE79 360 aa7.23□□□□□ -1.25
CHD9-206ENST00000562791 C20orf173Q96LM9 149 aa7.23□□□□□ -1.25
CHD9-206ENST00000562791 MTA3Q9BTC8 594 aa7.23□□□□□ -1.25
CHD9-206ENST00000562791 BCAS3Q9H6U6 928 aa7.23□□□□□ -1.25
CHD9-206ENST00000562791 TBX1O43435 398 aa7.22□□□□□ -1.25
CHD9-206ENST00000562791 PRR5P85299 388 aa7.22□□□□□ -1.25
CHD9-206ENST00000562791 SCRN1Q12765 414 aa7.22□□□□□ -1.25
CHD9-206ENST00000562791 TMEM151BQ8IW70 566 aa7.22□□□□□ -1.25
CHD9-206ENST00000562791 MARCH10Q8NA82 808 aaPredicted RBP7.22□□□□□ -1.25
CHD9-206ENST00000562791 COPS5Q92905 334 aa7.22□□□□□ -1.25
CHD9-206ENST00000562791 TINF2Q9BSI4 451 aa7.22□□□□□ -1.25
CHD9-206ENST00000562791 PARD6AQ9NPB6 346 aa7.22□□□□□ -1.25
CHD9-206ENST00000562791 GPRC5CQ9NQ84 441 aa7.22□□□□□ -1.25
CHD9-206ENST00000562791 ACTR10Q9NZ32 417 aa7.22□□□□□ -1.25
CHD9-206ENST00000562791 CLEC1BQ9P126 229 aa7.22□□□□□ -1.25
CHD9-206ENST00000562791 RAPGEFL1Q9UHV5 662 aa7.22□□□□□ -1.25
CHD9-206ENST00000562791 CCDC9Q9Y3X0 531 aaKnown RBP7.22□□□□□ -1.25
CHD9-206ENST00000562791 NPHP3-ACAD11A0A0J9YXS1 232 aa7.21□□□□□ -1.26
CHD9-206ENST00000562791 C7orf72A4D263 438 aa7.21□□□□□ -1.26
CHD9-206ENST00000562791 SSBP05455 408 aaKnown RBP eCLIP7.21□□□□□ -1.26
CHD9-206ENST00000562791 THBDP07204 575 aa7.21□□□□□ -1.26
CHD9-206ENST00000562791 FGRP09769 529 aa7.21□□□□□ -1.26
CHD9-206ENST00000562791 PAMP19021 973 aa7.21□□□□□ -1.26
CHD9-206ENST00000562791 ETFBP38117 255 aa7.21□□□□□ -1.26
CHD9-206ENST00000562791 MC3RP41968 323 aa7.21□□□□□ -1.26
CHD9-206ENST00000562791 NCAPHQ15003 741 aa7.21□□□□□ -1.26
CHD9-206ENST00000562791 LARP1BQ659C4 914 aaKnown RBP7.21□□□□□ -1.26
CHD9-206ENST00000562791 MRM1Q6IN84 353 aaKnown RBP7.21□□□□□ -1.26
CHD9-206ENST00000562791 TRIM59Q8IWR1 403 aa7.21□□□□□ -1.26
CHD9-206ENST00000562791 LZTR1Q8N653 840 aa7.21□□□□□ -1.26
CHD9-206ENST00000562791 MICAL1Q8TDZ2 1067 aa7.21□□□□□ -1.26
CHD9-206ENST00000562791 MRGPRX3Q96LB0 322 aa7.21□□□□□ -1.26
CHD9-206ENST00000562791 PWWP2AQ96N64 755 aa7.21□□□□□ -1.26
CHD9-206ENST00000562791 APBA2Q99767 749 aa7.21□□□□□ -1.26
CHD9-206ENST00000562791 A0A0G2JLL6 359 aaPredicted RBP7.2□□□□□ -1.26
CHD9-206ENST00000562791 PLA2G1BP04054 148 aaKnown RBP7.2□□□□□ -1.26
CHD9-206ENST00000562791 PLS3P13797 630 aa7.2□□□□□ -1.26
CHD9-206ENST00000562791 ATF2P15336 505 aa7.2□□□□□ -1.26
CHD9-206ENST00000562791 ZNF143P52747 638 aaPredicted RBP7.2□□□□□ -1.26
CHD9-206ENST00000562791 GTF2IRD2BQ6EKJ0 949 aa7.2□□□□□ -1.26
CHD9-206ENST00000562791 GTF2IRD2Q86UP8 949 aa7.2□□□□□ -1.26
CHD9-206ENST00000562791 PPP1R14AQ96A00 147 aa7.2□□□□□ -1.26
CHD9-206ENST00000562791 KRTAP4-9Q9BYQ8 210 aa7.2□□□□□ -1.26
CHD9-206ENST00000562791 ZCCHC4Q9H5U6 513 aa7.2□□□□□ -1.26
CHD9-206ENST00000562791 INF2Q27J81 1249 aa7.19□□□□□ -1.26
CHD9-206ENST00000562791 FAM178BQ8IXR5 827 aa7.19□□□□□ -1.26
CHD9-206ENST00000562791 TP53I13Q8NBR0 393 aaPredicted RBP7.19□□□□□ -1.26
CHD9-206ENST00000562791 BTN2A2Q8WVV5 523 aa7.19□□□□□ -1.26
CHD9-206ENST00000562791 NKX2-4Q9H2Z4 354 aa7.19□□□□□ -1.26
CHD9-206ENST00000562791 PRKAG3Q9UGI9 489 aa7.19□□□□□ -1.26
CHD9-206ENST00000562791 DBR1Q9UK59 544 aaKnown RBP7.19□□□□□ -1.26
CHD9-206ENST00000562791 ASGR2P07307 311 aa7.18□□□□□ -1.26
CHD9-206ENST00000562791 PFKLP17858 780 aa7.18□□□□□ -1.26
CHD9-206ENST00000562791 TNNI3KQ59H18 835 aa7.18□□□□□ -1.26
CHD9-206ENST00000562791 WWC2Q6AWC2 1192 aa7.18□□□□□ -1.26
CHD9-206ENST00000562791 POMZP3Q6PJE2 187 aa7.18□□□□□ -1.26
CHD9-206ENST00000562791 ZNF227Q86WZ6 799 aa7.18□□□□□ -1.26
CHD9-206ENST00000562791 CRACR2BQ8N4Y2 399 aaPredicted RBP7.18□□□□□ -1.26
CHD9-206ENST00000562791 FRS2Q8WU20 508 aa7.18□□□□□ -1.26
CHD9-206ENST00000562791 ALG3Q92685 438 aa7.18□□□□□ -1.26
CHD9-206ENST00000562791 DPF3Q92784 378 aa7.18□□□□□ -1.26
CHD9-206ENST00000562791 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.18□□□□□ -1.26
CHD9-206ENST00000562791 ZNF408Q9H9D4 720 aa7.18□□□□□ -1.26
CHD9-206ENST00000562791 TRBV23OR9-2A0A075B6M9 112 aa7.17□□□□□ -1.26
CHD9-206ENST00000562791 NOP56O00567 594 aaKnown RBP7.17□□□□□ -1.26
CHD9-206ENST00000562791 FFAR3O14843 346 aa7.17□□□□□ -1.26
CHD9-206ENST00000562791 SUSD5O60279 629 aa7.17□□□□□ -1.26
CHD9-206ENST00000562791 NAT2P11245 290 aa7.17□□□□□ -1.26
CHD9-206ENST00000562791 PMLP29590 882 aa7.17□□□□□ -1.26
CHD9-206ENST00000562791 CTSWP56202 376 aa7.17□□□□□ -1.26
CHD9-206ENST00000562791 VWA3BQ502W6 1294 aa7.17□□□□□ -1.26
CHD9-206ENST00000562791 CABP7Q86V35 215 aa7.17□□□□□ -1.26
CHD9-206ENST00000562791 LINC01356Q8N9X3 169 aa7.17□□□□□ -1.26
CHD9-206ENST00000562791 SYT8Q8NBV8 401 aa7.17□□□□□ -1.26
CHD9-206ENST00000562791 NETO2Q8NC67 525 aa7.17□□□□□ -1.26
CHD9-206ENST00000562791 NPLOC4Q8TAT6 608 aa7.17□□□□□ -1.26
CHD9-206ENST00000562791 FEZF2Q8TBJ5 459 aa7.17□□□□□ -1.26
CHD9-206ENST00000562791 TSPAN17Q96FV3 270 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms