RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 CDR1P51861 262 aa7.1□□□□□ -1.27
SMG1-206ENST00000562668 PAK2Q13177 524 aa7.1□□□□□ -1.27
SMG1-206ENST00000562668 RAB3GAP1Q15042 981 aa7.1□□□□□ -1.27
SMG1-206ENST00000562668 CCDC81Q6ZN84 652 aa7.1□□□□□ -1.27
SMG1-206ENST00000562668 TMC6Q7Z403 805 aa7.1□□□□□ -1.27
SMG1-206ENST00000562668 ZNF654Q8IZM8 581 aa7.1□□□□□ -1.27
SMG1-206ENST00000562668 FIBCD1Q8N539 461 aa7.1□□□□□ -1.27
SMG1-206ENST00000562668 BRF1Q92994 677 aa7.1□□□□□ -1.27
SMG1-206ENST00000562668 NUDT19A8MXV4 375 aa7.09□□□□□ -1.27
SMG1-206ENST00000562668 FGF10O15520 208 aaPredicted RBP7.09□□□□□ -1.27
SMG1-206ENST00000562668 CD247P20963 164 aa7.09□□□□□ -1.27
SMG1-206ENST00000562668 MZB1Q8WU39 189 aa7.09□□□□□ -1.27
SMG1-206ENST00000562668 SPATA32Q96LK8 384 aa7.09□□□□□ -1.27
SMG1-206ENST00000562668 GINM1Q9NU53 330 aa7.09□□□□□ -1.27
SMG1-206ENST00000562668 SF3B6Q9Y3B4 125 aaKnown RBP7.09□□□□□ -1.27
SMG1-206ENST00000562668 ZNF451Q9Y4E5 1061 aa7.09□□□□□ -1.27
SMG1-206ENST00000562668 EHBP1L1Q8N3D4 1523 aa7.09□□□□□ -1.27
SMG1-206ENST00000562668 CDC42BPAQ5VT25 1732 aa7.09□□□□□ -1.27
SMG1-206ENST00000562668 CDC42BPBQ9Y5S2 1711 aa7.09□□□□□ -1.27
SMG1-206ENST00000562668 ARAP3Q8WWN8 1544 aa7.08□□□□□ -1.28
SMG1-206ENST00000562668 MYO5CQ9NQX4 1742 aa7.08□□□□□ -1.28
SMG1-206ENST00000562668 PLEKHD1A6NEE1 506 aa7.08□□□□□ -1.28
SMG1-206ENST00000562668 SOX9P48436 509 aa7.08□□□□□ -1.28
SMG1-206ENST00000562668 PLEKHN1Q494U1 663 aaPredicted RBP7.08□□□□□ -1.28
SMG1-206ENST00000562668 HLA-DQA1Q5Y7H0 255 aa7.08□□□□□ -1.28
SMG1-206ENST00000562668 RPTNQ6XPR3 784 aa7.08□□□□□ -1.28
SMG1-206ENST00000562668 METTL16Q86W50 562 aaKnown RBP7.08□□□□□ -1.28
SMG1-206ENST00000562668 JAMLQ86YT9 394 aa7.08□□□□□ -1.28
SMG1-206ENST00000562668 NOL6Q9H6R4 1146 aaKnown RBP7.08□□□□□ -1.28
SMG1-206ENST00000562668 PARD6AQ9NPB6 346 aa7.08□□□□□ -1.28
SMG1-206ENST00000562668 SLC12A7Q9Y666 1083 aa7.08□□□□□ -1.28
SMG1-206ENST00000562668 LRRC9Q6ZRR7 1453 aa7.08□□□□□ -1.28
SMG1-206ENST00000562668 CD109Q6YHK3 1445 aa7.08□□□□□ -1.28
SMG1-206ENST00000562668 PREX2Q70Z35 1606 aa7.08□□□□□ -1.28
SMG1-206ENST00000562668 LTBP3Q9NS15 1303 aa7.07□□□□□ -1.28
SMG1-206ENST00000562668 CBFA2T2O43439 604 aa7.07□□□□□ -1.28
SMG1-206ENST00000562668 CD3EP07766 207 aa7.07□□□□□ -1.28
SMG1-206ENST00000562668 MSL3P1P0C860 447 aa7.07□□□□□ -1.28
SMG1-206ENST00000562668 HOXA5P20719 270 aa7.07□□□□□ -1.28
SMG1-206ENST00000562668 MVKQ03426 396 aa7.07□□□□□ -1.28
SMG1-206ENST00000562668 CBX2Q14781 532 aaPredicted RBP7.07□□□□□ -1.28
SMG1-206ENST00000562668 C19orf47Q8N9M1 422 aaKnown RBP7.07□□□□□ -1.28
SMG1-206ENST00000562668 PANK1Q8TE04 598 aa7.07□□□□□ -1.28
SMG1-206ENST00000562668 DACT3Q96B18 629 aaPredicted RBP7.07□□□□□ -1.28
SMG1-206ENST00000562668 GPRASP2Q96D09 838 aa7.07□□□□□ -1.28
SMG1-206ENST00000562668 ZDHHC15Q96MV8 337 aa7.07□□□□□ -1.28
SMG1-206ENST00000562668 CRBNQ96SW2 442 aa7.07□□□□□ -1.28
SMG1-206ENST00000562668 EFR3BQ9Y2G0 817 aa7.07□□□□□ -1.28
SMG1-206ENST00000562668 A0A1W2PQ27 194 aa7.06□□□□□ -1.28
SMG1-206ENST00000562668 A0A1W2PQ64 194 aa7.06□□□□□ -1.28
SMG1-206ENST00000562668 A0A1W2PQC6 194 aa7.06□□□□□ -1.28
SMG1-206ENST00000562668 A0A1W2PQD8 194 aa7.06□□□□□ -1.28
SMG1-206ENST00000562668 TRIM13O60858 407 aa7.06□□□□□ -1.28
SMG1-206ENST00000562668 IFNGR1P15260 489 aa7.06□□□□□ -1.28
SMG1-206ENST00000562668 BMP7P18075 431 aa7.06□□□□□ -1.28
SMG1-206ENST00000562668 NOP2P46087 812 aaKnown RBP7.06□□□□□ -1.28
SMG1-206ENST00000562668 AFF3P51826 1226 aaKnown RBP7.06□□□□□ -1.28
SMG1-206ENST00000562668 CTSWP56202 376 aa7.06□□□□□ -1.28
SMG1-206ENST00000562668 EIF6P56537 245 aaKnown RBP7.06□□□□□ -1.28
SMG1-206ENST00000562668 TCEAL1Q15170 157 aa7.06□□□□□ -1.28
SMG1-206ENST00000562668 LDHDQ86WU2 507 aa7.06□□□□□ -1.28
SMG1-206ENST00000562668 IGDCC3Q8IVU1 814 aa7.06□□□□□ -1.28
SMG1-206ENST00000562668 RASGRP4Q8TDF6 673 aa7.06□□□□□ -1.28
SMG1-206ENST00000562668 FCRL3Q96P31 734 aaPredicted RBP7.06□□□□□ -1.28
SMG1-206ENST00000562668 KCNC2Q96PR1 638 aa7.06□□□□□ -1.28
SMG1-206ENST00000562668 HAUS7Q99871 368 aa7.06□□□□□ -1.28
SMG1-206ENST00000562668 ZCCHC4Q9H5U6 513 aa7.06□□□□□ -1.28
SMG1-206ENST00000562668 PHAXQ9H814 394 aaKnown RBP7.06□□□□□ -1.28
SMG1-206ENST00000562668 EPB41L4AQ9HCS5 686 aaPredicted RBP7.06□□□□□ -1.28
SMG1-206ENST00000562668 WHRNQ9P202 907 aa7.06□□□□□ -1.28
SMG1-206ENST00000562668 PLCH2O75038 1416 aa7.06□□□□□ -1.28
SMG1-206ENST00000562668 GPATCH8Q9UKJ3 1502 aaKnown RBP7.06□□□□□ -1.28
SMG1-206ENST00000562668 SUPT6HQ7KZ85 1726 aaKnown RBP7.05□□□□□ -1.28
SMG1-206ENST00000562668 FRMPD1Q5SYB0 1578 aa7.05□□□□□ -1.28
SMG1-206ENST00000562668 A0A087WZG4 1122 aa7.05□□□□□ -1.28
SMG1-206ENST00000562668 SRGAP3O43295 1099 aa7.05□□□□□ -1.28
SMG1-206ENST00000562668 MAPKAPK2P49137 400 aa7.05□□□□□ -1.28
SMG1-206ENST00000562668 CORO7P57737 925 aa7.05□□□□□ -1.28
SMG1-206ENST00000562668 POU4F1Q01851 419 aa7.05□□□□□ -1.28
SMG1-206ENST00000562668 NR1I3Q14994 352 aa7.05□□□□□ -1.28
SMG1-206ENST00000562668 TMEFF1Q8IYR6 380 aa7.05□□□□□ -1.28
SMG1-206ENST00000562668 OR6P1Q8NGX9 317 aa7.05□□□□□ -1.28
SMG1-206ENST00000562668 PTCHD1Q96NR3 888 aa7.05□□□□□ -1.28
SMG1-206ENST00000562668 CDK11AQ9UQ88 783 aaPredicted RBP7.05□□□□□ -1.28
SMG1-206ENST00000562668 PCDHA5Q9Y5H7 936 aa7.05□□□□□ -1.28
SMG1-206ENST00000562668 ADAMTS20P59510 1910 aa7.05□□□□□ -1.28
SMG1-206ENST00000562668 NCOA2Q15596 1464 aa7.04□□□□□ -1.28
SMG1-206ENST00000562668 TEX14Q8IWB6 1497 aa7.04□□□□□ -1.28
SMG1-206ENST00000562668 NEO1Q92859 1461 aa7.04□□□□□ -1.28
SMG1-206ENST00000562668 NCANO14594 1321 aa7.04□□□□□ -1.28
SMG1-206ENST00000562668 GIPRP48546 466 aa7.04□□□□□ -1.28
SMG1-206ENST00000562668 GNPTABQ3T906 1256 aa7.04□□□□□ -1.28
SMG1-206ENST00000562668 ZC3H14Q6PJT7 736 aaKnown RBP7.04□□□□□ -1.28
SMG1-206ENST00000562668 MARCH10Q8NA82 808 aaPredicted RBP7.04□□□□□ -1.28
SMG1-206ENST00000562668 ADCY4Q8NFM4 1077 aa7.04□□□□□ -1.28
SMG1-206ENST00000562668 KLHL25Q9H0H3 589 aa7.04□□□□□ -1.28
SMG1-206ENST00000562668 GBP3Q9H0R5 595 aa7.04□□□□□ -1.28
SMG1-206ENST00000562668 KDM6BO15054 1643 aa7.04□□□□□ -1.28
SMG1-206ENST00000562668 RICTORQ6R327 1708 aa7.04□□□□□ -1.28
SMG1-206ENST00000562668 SAMD9LQ8IVG5 1584 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms