RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 USP14P54578 494 aa8.4□□□□□ -1.06
CNEP1R1-204ENST00000562576 CTC1Q2NKJ3 1217 aa8.4□□□□□ -1.06
CNEP1R1-204ENST00000562576 CCDC144BQ3MJ40 725 aa8.4□□□□□ -1.06
CNEP1R1-204ENST00000562576 NAA16Q6N069 864 aaPredicted RBP8.4□□□□□ -1.06
CNEP1R1-204ENST00000562576 HERC6Q8IVU3 1022 aa8.4□□□□□ -1.06
CNEP1R1-204ENST00000562576 CYP4X1Q8N118 509 aa8.4□□□□□ -1.06
CNEP1R1-204ENST00000562576 UPF3AQ9H1J1 476 aaKnown RBP8.4□□□□□ -1.06
CNEP1R1-204ENST00000562576 GINM1Q9NU53 330 aa8.4□□□□□ -1.06
CNEP1R1-204ENST00000562576 TRMT13Q9NUP7 481 aaKnown RBP8.4□□□□□ -1.06
CNEP1R1-204ENST00000562576 LRP2BPQ9P2M1 347 aa8.4□□□□□ -1.06
CNEP1R1-204ENST00000562576 NRBP1Q9UHY1 535 aa8.4□□□□□ -1.06
CNEP1R1-204ENST00000562576 COL4A6Q14031 1691 aa8.4□□□□□ -1.07
CNEP1R1-204ENST00000562576 TECTAO75443 2155 aa8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 CACNA1FO60840 1977 aa8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 TLR3O15455 904 aaKnown RBP8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 FLOT1O75955 427 aa8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 MAP4K4O95819 1239 aaPredicted RBP8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 CST5P28325 142 aaPredicted RBP8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 IL15P40933 162 aaPredicted RBP8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 GJA9P57773 515 aa8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 ZP2Q05996 745 aa8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 ITGA7Q13683 1181 aa8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 ACVR2BQ13705 512 aa8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 TREML4Q6UXN2 200 aa8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 ASCL5Q7RTU5 278 aa8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 MIGA1Q8NAN2 632 aa8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 THAP11Q96EK4 314 aa8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 KCNH6Q9H252 994 aa8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 MTIF3Q9H2K0 278 aaKnown RBP8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 PIH1D3Q9NQM4 214 aaKnown RBP8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 TOR4AQ9NXH8 423 aa8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 SLC5A4Q9NY91 659 aa8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 CNPY2Q9Y2B0 182 aa8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 FCF1Q9Y324 198 aaKnown RBP8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 EPG5Q9HCE0 2579 aa8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 PTPRSQ13332 1948 aa8.39□□□□□ -1.07
CNEP1R1-204ENST00000562576 PTPRZ1P23471 2315 aaPredicted RBP8.38□□□□□ -1.07
CNEP1R1-204ENST00000562576 ROBO3Q96MS0 1386 aa8.38□□□□□ -1.07
CNEP1R1-204ENST00000562576 MROH7Q68CQ1 1323 aa8.38□□□□□ -1.07
CNEP1R1-204ENST00000562576 VPS13AQ96RL7 3174 aa8.38□□□□□ -1.07
CNEP1R1-204ENST00000562576 DDX11L8A8MPP1 907 aa8.38□□□□□ -1.07
CNEP1R1-204ENST00000562576 ZBTB24O43167 697 aaPredicted RBP8.38□□□□□ -1.07
CNEP1R1-204ENST00000562576 CYP2D6P10635 497 aa8.38□□□□□ -1.07
CNEP1R1-204ENST00000562576 GCGRP47871 477 aa8.38□□□□□ -1.07
CNEP1R1-204ENST00000562576 VCPP55072 806 aaKnown RBP8.38□□□□□ -1.07
CNEP1R1-204ENST00000562576 FUT2Q10981 343 aa8.38□□□□□ -1.07
CNEP1R1-204ENST00000562576 KCTD2Q14681 263 aa8.38□□□□□ -1.07
CNEP1R1-204ENST00000562576 GPNMBQ14956 572 aa8.38□□□□□ -1.07
CNEP1R1-204ENST00000562576 CLUL1Q15846 466 aa8.38□□□□□ -1.07
CNEP1R1-204ENST00000562576 REPS2Q8NFH8 660 aa8.38□□□□□ -1.07
CNEP1R1-204ENST00000562576 KATNBL1Q9H079 304 aa8.38□□□□□ -1.07
CNEP1R1-204ENST00000562576 ADAMTS5Q9UNA0 930 aa8.38□□□□□ -1.07
CNEP1R1-204ENST00000562576 MYO5AQ9Y4I1 1855 aaKnown RBP8.38□□□□□ -1.07
CNEP1R1-204ENST00000562576 ZFHX4Q86UP3 3567 aa8.38□□□□□ -1.07
CNEP1R1-204ENST00000562576 MED19A0JLT2 244 aaPredicted RBP8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 MPHOSPH10O00566 681 aaKnown RBP8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 AXIN1O15169 862 aa8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 ST8SIA5O15466 376 aa8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 CYP2E1P05181 493 aaPredicted RBP8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 HLA-DOAP06340 250 aa8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 STAT3P40763 770 aa8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 SMCPP49901 116 aaPredicted RBP8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 DEFB103AP81534 67 aa8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 RIOX2Q8IUF8 465 aa8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 RPUSD2Q8IZ73 545 aaKnown RBP8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 PCSK9Q8NBP7 692 aaKnown RBP8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 NEK9Q8TD19 979 aa8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 MFSD14AQ96MC6 490 aa8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 COPRSQ9NQ92 184 aa8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 PDGFCQ9NRA1 345 aa8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 SERPINB13Q9UIV8 391 aa8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 ZNF214Q9UL59 606 aaPredicted RBP8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 DIS3Q9Y2L1 958 aaKnown RBP8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 COL11A1P12107 1806 aaPredicted RBP8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 DMXL1Q9Y485 3027 aa8.37□□□□□ -1.07
CNEP1R1-204ENST00000562576 TET1Q8NFU7 2136 aa8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 FOCADQ5VW36 1801 aa8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 ZNF536O15090 1300 aa8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 MCM3APO60318 1980 aa8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 DNAJC25-GNG10A0A024R161 153 aa8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 VWA5AO00534 786 aa8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 DYNC1LI2O43237 492 aaPredicted RBP8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 BAG3O95817 575 aa8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 ARID4AP29374 1257 aaPredicted RBP8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 FOXK2Q01167 660 aa8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 CNTN2Q02246 1040 aa8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 DLX2Q07687 328 aaPredicted RBP8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 MVPQ14764 893 aaKnown RBP8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 MSS51Q4VC12 460 aa8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 FAM117BQ6P1L5 589 aa8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 BRICD5Q6PL45 260 aa8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 MAMDC4Q6UXC1 1216 aa8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 EP400NLQ6ZTU2 488 aa8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 FAM160A2Q8N612 972 aaPredicted RBP8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 DYNLL2Q96FJ2 89 aa8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 NUP88Q99567 741 aaPredicted RBP8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 NOL10Q9BSC4 688 aaKnown RBP8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 C17orf80Q9BSJ5 609 aa8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 ALDH8A1Q9H2A2 487 aaPredicted RBP8.36□□□□□ -1.07
CNEP1R1-204ENST00000562576 PRKRIP1Q9H875 184 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms