RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 LAMA4Q16363 1823 aa19.65■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 PTPDC1A2A3K4 754 aa19.65■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 GRXCR1A8MXD5 290 aa19.65■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 SNHG28P0DPA3 235 aa19.65■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 PBX2P40425 430 aa19.65■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 ZNF543Q08ER8 600 aa19.65■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 DUSP28Q4G0W2 176 aa19.65■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 B4GALNT3Q6L9W6 998 aa19.65■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 MFSD6Q6ZSS7 791 aa19.65■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 ZNF365Q70YC5 407 aa19.65■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 TIFAQ96CG3 184 aa19.65■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 TTC14Q96N46 770 aa19.65■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 HIPK3Q9H422 1215 aa19.65■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 ADD3Q9UEY8 706 aaKnown RBP19.65■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 NEDD4P46934 1319 aa19.65■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 ZEB2O60315 1214 aa19.64■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 B4GALT4O60513 344 aa19.64■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 PCP11498 1178 aaKnown RBP19.64■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 SDSP20132 328 aa19.64■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 PSRC1Q6PGN9 363 aaPredicted RBP19.64■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 PBX4Q9BYU1 374 aa19.64■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 TRPV6Q9H1D0 765 aa19.64■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 ZNF576Q9H609 170 aa19.64■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 IL23AQ9NPF7 189 aa19.64■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 LOC102724159A0A0B4J2E5 919 aa19.63■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 CALML3P27482 149 aa19.63■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 PWP2Q15269 919 aaKnown RBP19.63■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 RNF207Q6ZRF8 634 aa19.63■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 ZKSCAN3Q9BRR0 538 aa19.63■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 MUC3AQ02505 3323 aa19.63■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 WDR19Q8NEZ3 1342 aa19.62■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 RBM47A0AV96 593 aaKnown RBP19.62■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 IGHDP01880 384 aa19.62■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 GOLGA8HP0CJ92 632 aa19.62■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 RPS6P62753 249 aaKnown RBP19.62■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 CHD1LQ86WJ1 897 aa19.62■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 PLEKHM2Q8IWE5 1019 aa19.62■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 HERVK_113Q902F9 699 aa19.62■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 NOC4LQ9BVI4 516 aaKnown RBP19.62■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 SEZ6LQ9BYH1 1024 aa19.62■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 WDR11Q9BZH6 1224 aa19.62■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 WNT8AQ9H1J5 351 aa19.62■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 CPVLQ9H3G5 476 aa19.62■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 CXXC1Q9P0U4 656 aaPredicted RBP19.62■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 EDNRBP24530 442 aa19.61■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 MFAP1P55081 439 aaKnown RBP19.61■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 CCL23P55773 120 aa19.61■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 PURAQ00577 322 aaKnown RBP19.61■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 AAMPQ13685 434 aa19.61■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 ESR2Q92731 530 aa19.61■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 ALDH8A1Q9H2A2 487 aaPredicted RBP19.61■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 RWDD1Q9H446 243 aaPredicted RBP19.61■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 OSBPL3Q9H4L5 887 aa19.61■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 RNF41Q9H4P4 317 aaPredicted RBP19.61■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 XIRP2A4UGR9 3374 aa19.61■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 ZNF213O14771 459 aa19.6■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 NUCB1Q02818 461 aa19.6■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 DGKHQ86XP1 1220 aa19.6■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 USP38Q8NB14 1042 aa19.6■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 VWCEQ96DN2 955 aa19.6■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 PNMA2Q9UL42 364 aa19.6■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 GBF1Q92538 1859 aa19.6■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 FGBP02675 491 aa19.59■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 CPT1AP50416 773 aa19.59■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 USH1GQ495M9 461 aa19.59■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 GPATCH4Q5T3I0 446 aaKnown RBP19.59■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 CWC27Q6UX04 472 aaKnown RBP19.59■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 OTOP2Q7RTS6 562 aa19.59■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 OR6J1Q8NGC5 347 aa19.59■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 UBA5Q9GZZ9 404 aa19.59■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 TRMT13Q9NUP7 481 aaKnown RBP19.59■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 POLR3EQ9NVU0 708 aa19.59■□□□□ 0.73
VPS9D1-AS1-201ENST00000562298 KDM4AO75164 1064 aa19.58■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 MYL3P08590 195 aa19.58■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 PDE4DQ08499 809 aa19.58■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 PNMA1Q8ND90 353 aa19.58■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 DNERQ8NFT8 737 aa19.58■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 COPS5Q92905 334 aa19.58■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 SCLYQ96I15 445 aa19.58■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 CYP2C9P11712 490 aa19.57■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 PPP2R5BQ15173 497 aa19.57■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 SCFD2Q8WU76 684 aa19.57■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 MTG1Q9BT17 334 aaPredicted RBP19.57■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 DIAPH3Q9NSV4 1193 aa19.57■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 TRANK1O15050 2925 aa19.57■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 TNKSO95271 1327 aa19.56■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 SCN10AQ9Y5Y9 1956 aa19.56■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 B4E1Z4 1266 aa19.56■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 ARIH2O95376 493 aa19.56■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 CDC37Q16543 378 aaPredicted RBP19.56■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 ENAHQ8N8S7 591 aaPredicted RBP19.56■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 RGS22Q8NE09 1264 aa19.56■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 EXOC6Q8TAG9 804 aa19.56■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 PPP1R13LQ8WUF5 828 aa19.56■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 TBC1D5Q92609 795 aa19.56■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 ANKS1AQ92625 1134 aa19.56■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 MPHOSPH6Q99547 160 aaKnown RBP19.56■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 MTIF3Q9H2K0 278 aaKnown RBP19.56■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 PRDM12Q9H4Q4 367 aa19.56■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 YBX2Q9Y2T7 364 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms