RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 DPP9Q86TI2 863 aa15.53■□□□□ 0.08
CDH1-204ENST00000562118 HOMER1Q86YM7 354 aa15.53■□□□□ 0.08
CDH1-204ENST00000562118 TINF2Q9BSI4 451 aa15.53■□□□□ 0.08
CDH1-204ENST00000562118 CWC22Q9HCG8 908 aaKnown RBP15.53■□□□□ 0.08
CDH1-204ENST00000562118 RBM27Q9P2N5 1060 aaKnown RBP15.53■□□□□ 0.08
CDH1-204ENST00000562118 STK36Q9NRP7 1315 aa15.52■□□□□ 0.08
CDH1-204ENST00000562118 DHX16O60231 1041 aaKnown RBP15.52■□□□□ 0.08
CDH1-204ENST00000562118 LARGE1O95461 756 aa15.52■□□□□ 0.08
CDH1-204ENST00000562118 CNTN2Q02246 1040 aa15.52■□□□□ 0.08
CDH1-204ENST00000562118 CACNB2Q08289 660 aaPredicted RBP15.52■□□□□ 0.08
CDH1-204ENST00000562118 TRIM32Q13049 653 aa15.52■□□□□ 0.08
CDH1-204ENST00000562118 BAATQ14032 418 aaPredicted RBP15.52■□□□□ 0.08
CDH1-204ENST00000562118 TYW1BQ6NUM6 668 aa15.52■□□□□ 0.08
CDH1-204ENST00000562118 RNF207Q6ZRF8 634 aa15.52■□□□□ 0.08
CDH1-204ENST00000562118 MCF2L2Q86YR7 1114 aa15.52■□□□□ 0.08
CDH1-204ENST00000562118 DNERQ8NFT8 737 aa15.52■□□□□ 0.08
CDH1-204ENST00000562118 GTF3C6Q969F1 213 aa15.52■□□□□ 0.08
CDH1-204ENST00000562118 NCOA5Q9HCD5 579 aaKnown RBP15.52■□□□□ 0.08
CDH1-204ENST00000562118 COL20A1Q9P218 1284 aa15.52■□□□□ 0.08
CDH1-204ENST00000562118 SEC63Q9UGP8 760 aaKnown RBP15.52■□□□□ 0.08
CDH1-204ENST00000562118 KIAA0100Q14667 2235 aaKnown RBP15.51■□□□□ 0.07
CDH1-204ENST00000562118 RPTORQ8N122 1335 aa15.51■□□□□ 0.07
CDH1-204ENST00000562118 POTEB2H3BUK9 544 aa15.51■□□□□ 0.07
CDH1-204ENST00000562118 STXBP3O00186 592 aa15.51■□□□□ 0.07
CDH1-204ENST00000562118 CTDNEP1O95476 244 aa15.51■□□□□ 0.07
CDH1-204ENST00000562118 WWC2Q6AWC2 1192 aa15.51■□□□□ 0.07
CDH1-204ENST00000562118 FAM177A1Q8N128 213 aaPredicted RBP15.51■□□□□ 0.07
CDH1-204ENST00000562118 TRPV1Q8NER1 839 aa15.51■□□□□ 0.07
CDH1-204ENST00000562118 SYTL5Q8TDW5 730 aaPredicted RBP15.51■□□□□ 0.07
CDH1-204ENST00000562118 TBC1D5Q92609 795 aa15.51■□□□□ 0.07
CDH1-204ENST00000562118 SHISA4Q96DD7 197 aa15.51■□□□□ 0.07
CDH1-204ENST00000562118 DDX11Q96FC9 970 aa15.51■□□□□ 0.07
CDH1-204ENST00000562118 LARP6Q9BRS8 491 aaKnown RBP15.51■□□□□ 0.07
CDH1-204ENST00000562118 BARHL2Q9NY43 387 aa15.51■□□□□ 0.07
CDH1-204ENST00000562118 ESYT2A0FGR8 921 aa15.5■□□□□ 0.07
CDH1-204ENST00000562118 MEIS2O14770 477 aa15.5■□□□□ 0.07
CDH1-204ENST00000562118 SNAI1O95863 264 aaPredicted RBP15.5■□□□□ 0.07
CDH1-204ENST00000562118 SCG2P13521 617 aa15.5■□□□□ 0.07
CDH1-204ENST00000562118 PRKAR2AP13861 404 aaKnown RBP15.5■□□□□ 0.07
CDH1-204ENST00000562118 CAPN2P17655 700 aa15.5■□□□□ 0.07
CDH1-204ENST00000562118 UBXN2AP68543 259 aa15.5■□□□□ 0.07
CDH1-204ENST00000562118 CCT2P78371 535 aaKnown RBP15.5■□□□□ 0.07
CDH1-204ENST00000562118 MTFR1Q15390 333 aa15.5■□□□□ 0.07
CDH1-204ENST00000562118 NSMFQ6X4W1 530 aa15.5■□□□□ 0.07
CDH1-204ENST00000562118 LIMCH1Q9UPQ0 1083 aa15.5■□□□□ 0.07
CDH1-204ENST00000562118 V9GY48 417 aaPredicted RBP15.5■□□□□ 0.07
CDH1-204ENST00000562118 ZNF865P0CJ78 1059 aaPredicted RBP15.49■□□□□ 0.07
CDH1-204ENST00000562118 CYP2C19P33261 490 aa15.49■□□□□ 0.07
CDH1-204ENST00000562118 SLC4A3P48751 1232 aa15.49■□□□□ 0.07
CDH1-204ENST00000562118 ALDH5A1P51649 535 aaPredicted RBP15.49■□□□□ 0.07
CDH1-204ENST00000562118 MFSD14CQ5VZR4 134 aa15.49■□□□□ 0.07
CDH1-204ENST00000562118 CCDC82Q8N4S0 544 aa15.49■□□□□ 0.07
CDH1-204ENST00000562118 PURBQ96QR8 312 aaKnown RBP15.49■□□□□ 0.07
CDH1-204ENST00000562118 CRISPLD2Q9H0B8 497 aa15.49■□□□□ 0.07
CDH1-204ENST00000562118 SLKQ9H2G2 1235 aaPredicted RBP15.49■□□□□ 0.07
CDH1-204ENST00000562118 hCG_1642624A0A1W2PR95 340 aa15.48■□□□□ 0.07
CDH1-204ENST00000562118 PTPDC1A2A3K4 754 aa15.48■□□□□ 0.07
CDH1-204ENST00000562118 ASB14A6NK59 587 aa15.48■□□□□ 0.07
CDH1-204ENST00000562118 CD2BP2O95400 341 aaKnown RBP15.48■□□□□ 0.07
CDH1-204ENST00000562118 GJB1P08034 283 aa15.48■□□□□ 0.07
CDH1-204ENST00000562118 CCL5P13501 91 aa15.48■□□□□ 0.07
CDH1-204ENST00000562118 CLK2P49760 499 aaKnown RBP15.48■□□□□ 0.07
CDH1-204ENST00000562118 ARMCX2Q7L311 632 aa15.48■□□□□ 0.07
CDH1-204ENST00000562118 PHKBQ93100 1093 aa15.48■□□□□ 0.07
CDH1-204ENST00000562118 ZMYND12Q9H0C1 365 aa15.48■□□□□ 0.07
CDH1-204ENST00000562118 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.48■□□□□ 0.07
CDH1-204ENST00000562118 UNC93B1Q9H1C4 597 aa15.48■□□□□ 0.07
CDH1-204ENST00000562118 SH3GLB2Q9NR46 395 aa15.48■□□□□ 0.07
CDH1-204ENST00000562118 ADD3Q9UEY8 706 aaKnown RBP15.48■□□□□ 0.07
CDH1-204ENST00000562118 RBM47A0AV96 593 aaKnown RBP15.47■□□□□ 0.07
CDH1-204ENST00000562118 CDKL5O76039 1030 aa15.47■□□□□ 0.07
CDH1-204ENST00000562118 DEXIO95424 95 aa15.47■□□□□ 0.07
CDH1-204ENST00000562118 GJA8P48165 433 aa15.47■□□□□ 0.07
CDH1-204ENST00000562118 NKX3-2P78367 333 aa15.47■□□□□ 0.07
CDH1-204ENST00000562118 IFFO2Q5TF58 517 aa15.47■□□□□ 0.07
CDH1-204ENST00000562118 LHX8Q68G74 356 aa15.47■□□□□ 0.07
CDH1-204ENST00000562118 NSUN7Q8NE18 718 aaKnown RBP15.47■□□□□ 0.07
CDH1-204ENST00000562118 GPKOWQ92917 476 aaPredicted RBP eCLIP15.47■□□□□ 0.07
CDH1-204ENST00000562118 ZSCAN31Q96LW9 406 aaPredicted RBP15.47■□□□□ 0.07
CDH1-204ENST00000562118 IWS1Q96ST2 819 aa15.47■□□□□ 0.07
CDH1-204ENST00000562118 ABHD16BQ9H3Z7 469 aa15.47■□□□□ 0.07
CDH1-204ENST00000562118 RIC8AQ9NPQ8 531 aa15.47■□□□□ 0.07
CDH1-204ENST00000562118 SH2B1Q9NRF2 756 aaPredicted RBP15.47■□□□□ 0.07
CDH1-204ENST00000562118 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.47■□□□□ 0.07
CDH1-204ENST00000562118 NAP1L2Q9ULW6 460 aaPredicted RBP15.47■□□□□ 0.07
CDH1-204ENST00000562118 GCOM1H8Y6P7 765 aaPredicted RBP15.46■□□□□ 0.07
CDH1-204ENST00000562118 SEPT4O43236 478 aa15.46■□□□□ 0.07
CDH1-204ENST00000562118 ST18O60284 1047 aa15.46■□□□□ 0.07
CDH1-204ENST00000562118 CFBP00751 764 aa15.46■□□□□ 0.07
CDH1-204ENST00000562118 POLR2MP0CAP2 368 aa15.46■□□□□ 0.07
CDH1-204ENST00000562118 FDPSP14324 419 aaKnown RBP15.46■□□□□ 0.07
CDH1-204ENST00000562118 CALML3P27482 149 aa15.46■□□□□ 0.07
CDH1-204ENST00000562118 CCND3P30281 292 aaPredicted RBP15.46■□□□□ 0.07
CDH1-204ENST00000562118 MCM2P49736 904 aa15.46■□□□□ 0.07
CDH1-204ENST00000562118 STK3Q13188 491 aa15.46■□□□□ 0.07
CDH1-204ENST00000562118 NPY5RQ15761 445 aa15.46■□□□□ 0.07
CDH1-204ENST00000562118 CPLX2Q6PUV4 134 aaKnown RBP15.46■□□□□ 0.07
CDH1-204ENST00000562118 HEATR3Q7Z4Q2 680 aa15.46■□□□□ 0.07
CDH1-204ENST00000562118 SMARCC2Q8TAQ2 1214 aa15.46■□□□□ 0.07
CDH1-204ENST00000562118 NSUN6Q8TEA1 469 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms