RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 DUSP11O75319 330 aaKnown RBP11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 NEFLP07196 543 aa11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 ASGR1P07306 291 aa11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 GRM4Q14833 912 aa11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 BMP2KLQ5H9B9 411 aa11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 GNASQ5JWF2 1037 aa11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 TAPT1Q6NXT6 567 aa11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 CXCL17Q6UXB2 119 aa11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 NFXL1Q6ZNB6 911 aa11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 TLK2Q86UE8 772 aa11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 CMTR1Q8N1G2 835 aaKnown RBP11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 KLHDC9Q8NEP7 349 aa11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 COPS5Q92905 334 aa11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 LRCH3Q96II8 777 aa11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 TAAR1Q96RJ0 339 aa11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 LBHD1Q9BQE6 289 aaPredicted RBP11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 COL20A1Q9P218 1284 aa11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 PRKAG2Q9UGJ0 569 aa11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 WDR19Q8NEZ3 1342 aa11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 TRIM43BA6NCK2 446 aa11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 CTAGE5O15320 804 aa11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 SORBS3O60504 671 aa11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 CFBP00751 764 aa11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 ITGB8P26012 769 aa11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 CHMP4BP1P59074 171 aa11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 PSMC6P62333 389 aa11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 PDE4DQ08499 809 aa11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 CASC1Q6TDU7 716 aa11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 SYTL5Q8TDW5 730 aaPredicted RBP11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 IGDCC4Q8TDY8 1250 aa11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 BADQ92934 168 aa11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 TRIM43Q96BQ3 446 aaPredicted RBP11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 AP5M1Q9H0R1 490 aa11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 SPC25Q9HBM1 224 aa11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 PDLIM7Q9NR12 457 aa11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 ADD3Q9UEY8 706 aaKnown RBP11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 LRRC37A2A6NM11 1700 aa11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 ABCB11O95342 1321 aa11.03□□□□□ -0.64
NSMCE1-203ENST00000562039 hCG_1642624A0A1W2PR95 340 aa11.02□□□□□ -0.65
NSMCE1-203ENST00000562039 PALM3A6NDB9 673 aaPredicted RBP11.02□□□□□ -0.65
NSMCE1-203ENST00000562039 RBAK-RBAKDNI3L0D1 243 aa11.02□□□□□ -0.65
NSMCE1-203ENST00000562039 CDC45O75419 566 aa11.02□□□□□ -0.65
NSMCE1-203ENST00000562039 EIF2AK2P19525 551 aaKnown RBP11.02□□□□□ -0.65
NSMCE1-203ENST00000562039 HOXA13P31271 388 aaPredicted RBP11.02□□□□□ -0.65
NSMCE1-203ENST00000562039 GJA9P57773 515 aa11.02□□□□□ -0.65
NSMCE1-203ENST00000562039 SART3Q15020 963 aaKnown RBP11.02□□□□□ -0.65
NSMCE1-203ENST00000562039 CCSAPQ6IQ19 270 aaPredicted RBP11.02□□□□□ -0.65
NSMCE1-203ENST00000562039 SEPT14Q6ZU15 432 aa11.02□□□□□ -0.65
NSMCE1-203ENST00000562039 CATIPQ7Z7H3 387 aa11.02□□□□□ -0.65
NSMCE1-203ENST00000562039 CCDC82Q8N4S0 544 aa11.02□□□□□ -0.65
NSMCE1-203ENST00000562039 WDR11Q9BZH6 1224 aa11.02□□□□□ -0.65
NSMCE1-203ENST00000562039 UPF3AQ9H1J1 476 aaKnown RBP11.02□□□□□ -0.65
NSMCE1-203ENST00000562039 LY9Q9HBG7 655 aa11.02□□□□□ -0.65
NSMCE1-203ENST00000562039 VTA1Q9NP79 307 aa11.02□□□□□ -0.65
NSMCE1-203ENST00000562039 GNEQ9Y223 722 aaKnown RBP11.02□□□□□ -0.65
NSMCE1-203ENST00000562039 RANBP2P49792 3224 aaKnown RBP11.02□□□□□ -0.65
NSMCE1-203ENST00000562039 DNAH12Q6ZR08 3092 aa11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 SH2B2O14492 632 aaPredicted RBP11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 OPLAHO14841 1288 aa11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 CYTH3O43739 400 aa11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 ARIH2O95376 493 aa11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 PLEKHA8P1O95397 391 aa11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 MYL3P08590 195 aa11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 CLTBP09497 229 aa11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 CPA1P15085 419 aa11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 SNX17Q15036 470 aa11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 NECTIN1Q15223 517 aa11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 FSCN1Q16658 493 aaKnown RBP11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 FCHSD1Q86WN1 690 aa11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 ZNF654Q8IZM8 581 aa11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 OR6J1Q8NGC5 347 aa11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 GLT1D1Q96MS3 346 aa11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 TSEN34Q9BSV6 310 aaKnown RBP11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 AMNQ9BXJ7 453 aa11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 TMEM39AQ9NV64 488 aa11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 MRPL11Q9Y3B7 192 aaKnown RBP11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 PCDHA1Q9Y5I3 950 aa11.01□□□□□ -0.65
NSMCE1-203ENST00000562039 MOXD2PA6NHM9 499 aa11□□□□□ -0.65
NSMCE1-203ENST00000562039 CCDC69A6NI79 296 aa11□□□□□ -0.65
NSMCE1-203ENST00000562039 ZBTB5O15062 677 aa11□□□□□ -0.65
NSMCE1-203ENST00000562039 MYCLP12524 364 aaPredicted RBP11□□□□□ -0.65
NSMCE1-203ENST00000562039 MCM5P33992 734 aa11□□□□□ -0.65
NSMCE1-203ENST00000562039 NT5C2P49902 561 aa11□□□□□ -0.65
NSMCE1-203ENST00000562039 TROAPQ12815 778 aa11□□□□□ -0.65
NSMCE1-203ENST00000562039 ADCK5Q3MIX3 580 aa11□□□□□ -0.65
NSMCE1-203ENST00000562039 C9orf50Q5SZB4 431 aa11□□□□□ -0.65
NSMCE1-203ENST00000562039 ARHGEF16Q5VV41 709 aa11□□□□□ -0.65
NSMCE1-203ENST00000562039 IQSEC1Q6DN90 963 aa11□□□□□ -0.65
NSMCE1-203ENST00000562039 TDHQ8IZJ6 230 aa11□□□□□ -0.65
NSMCE1-203ENST00000562039 PCSK9Q8NBP7 692 aaKnown RBP11□□□□□ -0.65
NSMCE1-203ENST00000562039 MORC4Q8TE76 937 aa11□□□□□ -0.65
NSMCE1-203ENST00000562039 RMDN3Q96TC7 470 aa11□□□□□ -0.65
NSMCE1-203ENST00000562039 PPP1R12CQ9BZL4 782 aa11□□□□□ -0.65
NSMCE1-203ENST00000562039 NAP1L2Q9ULW6 460 aaPredicted RBP11□□□□□ -0.65
NSMCE1-203ENST00000562039 TXNP10599 105 aaKnown RBP10.99□□□□□ -0.65
NSMCE1-203ENST00000562039 RAG1P15918 1043 aa10.99□□□□□ -0.65
NSMCE1-203ENST00000562039 CST5P28325 142 aaPredicted RBP10.99□□□□□ -0.65
NSMCE1-203ENST00000562039 BMP8BP34820 402 aa10.99□□□□□ -0.65
NSMCE1-203ENST00000562039 EPHB4P54760 987 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms