RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 CFBP00751 764 aa27.06■■□□□ 1.92
SMPD3-202ENST00000561749 ARMCX2Q7L311 632 aa27.06■■□□□ 1.92
SMPD3-202ENST00000561749 SHISA4Q96DD7 197 aa27.06■■□□□ 1.92
SMPD3-202ENST00000561749 C22orf23Q9BZE7 217 aa27.06■■□□□ 1.92
SMPD3-202ENST00000561749 NCOA5Q9HCD5 579 aaKnown RBP27.06■■□□□ 1.92
SMPD3-202ENST00000561749 SNAI1O95863 264 aaPredicted RBP27.05■■□□□ 1.92
SMPD3-202ENST00000561749 EVCP57679 992 aa27.05■■□□□ 1.92
SMPD3-202ENST00000561749 FUT2Q10981 343 aa27.05■■□□□ 1.92
SMPD3-202ENST00000561749 STK3Q13188 491 aa27.05■■□□□ 1.92
SMPD3-202ENST00000561749 MAMDC4Q6UXC1 1216 aa27.05■■□□□ 1.92
SMPD3-202ENST00000561749 NOL8Q76FK4 1167 aaKnown RBP27.05■■□□□ 1.92
SMPD3-202ENST00000561749 MCF2L2Q86YR7 1114 aa27.05■■□□□ 1.92
SMPD3-202ENST00000561749 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.05■■□□□ 1.92
SMPD3-202ENST00000561749 SYNGAP1Q96PV0 1343 aa27.05■■□□□ 1.92
SMPD3-202ENST00000561749 NID2Q14112 1375 aa27.05■■□□□ 1.92
SMPD3-202ENST00000561749 SGPL1O95470 568 aa27.04■■□□□ 1.92
SMPD3-202ENST00000561749 GJA8P48165 433 aa27.04■■□□□ 1.92
SMPD3-202ENST00000561749 AK2P54819 239 aa27.04■■□□□ 1.92
SMPD3-202ENST00000561749 ANO1Q5XXA6 986 aa27.04■■□□□ 1.92
SMPD3-202ENST00000561749 MSL3Q8N5Y2 521 aaKnown RBP27.04■■□□□ 1.92
SMPD3-202ENST00000561749 RGS22Q8NE09 1264 aa27.04■■□□□ 1.92
SMPD3-202ENST00000561749 GPKOWQ92917 476 aaPredicted RBP eCLIP27.04■■□□□ 1.92
SMPD3-202ENST00000561749 COL20A1Q9P218 1284 aa27.04■■□□□ 1.92
SMPD3-202ENST00000561749 ZHX1Q9UKY1 873 aaPredicted RBP27.04■■□□□ 1.92
SMPD3-202ENST00000561749 CNPY2Q9Y2B0 182 aa27.04■■□□□ 1.92
SMPD3-202ENST00000561749 CCDC196A0A1B0GTZ2 297 aa27.03■■□□□ 1.92
SMPD3-202ENST00000561749 PPFIA3O75145 1194 aa27.03■■□□□ 1.92
SMPD3-202ENST00000561749 TFRCP02786 760 aaKnown RBP27.03■■□□□ 1.92
SMPD3-202ENST00000561749 ALDH5A1P51649 535 aaPredicted RBP27.03■■□□□ 1.92
SMPD3-202ENST00000561749 NEK4P51957 841 aa27.03■■□□□ 1.92
SMPD3-202ENST00000561749 TRAF1Q13077 416 aa27.03■■□□□ 1.92
SMPD3-202ENST00000561749 SYTL5Q8TDW5 730 aaPredicted RBP27.03■■□□□ 1.92
SMPD3-202ENST00000561749 V9GY48 417 aaPredicted RBP27.03■■□□□ 1.92
SMPD3-202ENST00000561749 ASB14A6NK59 587 aa27.02■■□□□ 1.92
SMPD3-202ENST00000561749 HOXA13P31271 388 aaPredicted RBP27.02■■□□□ 1.92
SMPD3-202ENST00000561749 PPP2R5BQ15173 497 aa27.02■■□□□ 1.92
SMPD3-202ENST00000561749 HEATR3Q7Z4Q2 680 aa27.02■■□□□ 1.92
SMPD3-202ENST00000561749 TAAR1Q96RJ0 339 aa27.02■■□□□ 1.92
SMPD3-202ENST00000561749 ADD3Q9UEY8 706 aaKnown RBP27.02■■□□□ 1.92
SMPD3-202ENST00000561749 ZNF865P0CJ78 1059 aaPredicted RBP27.01■■□□□ 1.91
SMPD3-202ENST00000561749 ZNF274Q96GC6 653 aaPredicted RBP27.01■■□□□ 1.91
SMPD3-202ENST00000561749 DDX20Q9UHI6 824 aaKnown RBP27.01■■□□□ 1.91
SMPD3-202ENST00000561749 TPCN1Q9ULQ1 816 aa27.01■■□□□ 1.91
SMPD3-202ENST00000561749 HSD17B4P51659 736 aa27■■□□□ 1.91
SMPD3-202ENST00000561749 LHX8Q68G74 356 aa27■■□□□ 1.91
SMPD3-202ENST00000561749 EEPD1Q7L9B9 569 aa27■■□□□ 1.91
SMPD3-202ENST00000561749 PHKBQ93100 1093 aa27■■□□□ 1.91
SMPD3-202ENST00000561749 KIF2CQ99661 725 aa27■■□□□ 1.91
SMPD3-202ENST00000561749 ALDH8A1Q9H2A2 487 aaPredicted RBP27■■□□□ 1.91
SMPD3-202ENST00000561749 UPF2Q9HAU5 1272 aaKnown RBP27■■□□□ 1.91
SMPD3-202ENST00000561749 NRBP1Q9UHY1 535 aa27■■□□□ 1.91
SMPD3-202ENST00000561749 SEPT4O43236 478 aa26.99■■□□□ 1.91
SMPD3-202ENST00000561749 ACVR2BQ13705 512 aa26.99■■□□□ 1.91
SMPD3-202ENST00000561749 WWC2Q6AWC2 1192 aa26.99■■□□□ 1.91
SMPD3-202ENST00000561749 LENG1Q96BZ8 264 aaPredicted RBP26.99■■□□□ 1.91
SMPD3-202ENST00000561749 CRISPLD2Q9H0B8 497 aa26.99■■□□□ 1.91
SMPD3-202ENST00000561749 GCOM1H8Y6P7 765 aaPredicted RBP26.98■■□□□ 1.91
SMPD3-202ENST00000561749 POLR2MP0CAP2 368 aa26.98■■□□□ 1.91
SMPD3-202ENST00000561749 RBM25P49756 843 aaKnown RBP26.98■■□□□ 1.91
SMPD3-202ENST00000561749 ANKRD1Q15327 319 aa26.98■■□□□ 1.91
SMPD3-202ENST00000561749 NTRK3Q16288 839 aa26.98■■□□□ 1.91
SMPD3-202ENST00000561749 FCHSD1Q86WN1 690 aa26.98■■□□□ 1.91
SMPD3-202ENST00000561749 FBXO16Q8IX29 292 aaPredicted RBP26.98■■□□□ 1.91
SMPD3-202ENST00000561749 KATNBL1Q9H079 304 aa26.98■■□□□ 1.91
SMPD3-202ENST00000561749 ABHD16BQ9H3Z7 469 aa26.98■■□□□ 1.91
SMPD3-202ENST00000561749 EIF2AK2P19525 551 aaKnown RBP26.97■■□□□ 1.91
SMPD3-202ENST00000561749 GHRHRQ02643 423 aa26.97■■□□□ 1.91
SMPD3-202ENST00000561749 DNERQ8NFT8 737 aa26.97■■□□□ 1.91
SMPD3-202ENST00000561749 RMDN3Q96TC7 470 aa26.97■■□□□ 1.91
SMPD3-202ENST00000561749 SLC26A6Q9BXS9 759 aa26.97■■□□□ 1.91
SMPD3-202ENST00000561749 MAF1Q9H063 256 aa26.97■■□□□ 1.91
SMPD3-202ENST00000561749 PDE4DQ08499 809 aa26.96■■□□□ 1.91
SMPD3-202ENST00000561749 MORC4Q8TE76 937 aa26.96■■□□□ 1.91
SMPD3-202ENST00000561749 SLKQ9H2G2 1235 aaPredicted RBP26.96■■□□□ 1.91
SMPD3-202ENST00000561749 OGDHLQ9ULD0 1010 aa26.96■■□□□ 1.91
SMPD3-202ENST00000561749 KIAA1217Q5T5P2 1943 aa26.96■■□□□ 1.91
SMPD3-202ENST00000561749 CPLX1O14810 134 aa26.95■■□□□ 1.9
SMPD3-202ENST00000561749 MSCO60682 206 aa26.95■■□□□ 1.9
SMPD3-202ENST00000561749 DTNBO60941 627 aa26.95■■□□□ 1.9
SMPD3-202ENST00000561749 LARGE1O95461 756 aa26.95■■□□□ 1.9
SMPD3-202ENST00000561749 AKR1A1P14550 325 aa26.95■■□□□ 1.9
SMPD3-202ENST00000561749 IFNAR1P17181 557 aa26.95■■□□□ 1.9
SMPD3-202ENST00000561749 RGS19P49795 217 aa26.95■■□□□ 1.9
SMPD3-202ENST00000561749 NAPAP54920 295 aa26.95■■□□□ 1.9
SMPD3-202ENST00000561749 SCRN1Q12765 414 aa26.95■■□□□ 1.9
SMPD3-202ENST00000561749 CCDC144BQ3MJ40 725 aa26.95■■□□□ 1.9
SMPD3-202ENST00000561749 ARHGEF16Q5VV41 709 aa26.95■■□□□ 1.9
SMPD3-202ENST00000561749 TYW1BQ6NUM6 668 aa26.95■■□□□ 1.9
SMPD3-202ENST00000561749 USP17L6PQ6QN14 398 aa26.95■■□□□ 1.9
SMPD3-202ENST00000561749 NSUN6Q8TEA1 469 aaKnown RBP26.95■■□□□ 1.9
SMPD3-202ENST00000561749 PDGFCQ9NRA1 345 aa26.95■■□□□ 1.9
SMPD3-202ENST00000561749 FAM184BQ9ULE4 1060 aa26.95■■□□□ 1.9
SMPD3-202ENST00000561749 STXBP3O00186 592 aa26.94■■□□□ 1.9
SMPD3-202ENST00000561749 PRPF3O43395 683 aaKnown RBP26.94■■□□□ 1.9
SMPD3-202ENST00000561749 FARP2O94887 1054 aaPredicted RBP26.94■■□□□ 1.9
SMPD3-202ENST00000561749 MYCNP04198 464 aaPredicted RBP26.94■■□□□ 1.9
SMPD3-202ENST00000561749 AKAP17AQ02040 695 aaKnown RBP26.94■■□□□ 1.9
SMPD3-202ENST00000561749 PFKFB3Q16875 520 aaPredicted RBP26.94■■□□□ 1.9
SMPD3-202ENST00000561749 SMARCC2Q8TAQ2 1214 aa26.94■■□□□ 1.9
SMPD3-202ENST00000561749 DIS3LQ8TF46 1054 aaKnown RBP26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms