RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 C22orf34Q6ZV56 151 aa5.65□□□□□ -1.5
LRRC28-222ENST00000561431 FAM177A1Q8N128 213 aaPredicted RBP5.65□□□□□ -1.5
LRRC28-222ENST00000561431 THAP3Q8WTV1 239 aaPredicted RBP5.65□□□□□ -1.5
LRRC28-222ENST00000561431 UBE2FQ969M7 185 aa5.65□□□□□ -1.5
LRRC28-222ENST00000561431 ZNF669Q96BR6 464 aaPredicted RBP5.65□□□□□ -1.5
LRRC28-222ENST00000561431 SYTL4Q96C24 671 aaPredicted RBP5.65□□□□□ -1.5
LRRC28-222ENST00000561431 SUSD2Q9UGT4 822 aa5.65□□□□□ -1.5
LRRC28-222ENST00000561431 KIF14Q15058 1648 aa5.65□□□□□ -1.51
LRRC28-222ENST00000561431 CLIP1P30622 1438 aa5.65□□□□□ -1.51
LRRC28-222ENST00000561431 ARAP3Q8WWN8 1544 aa5.64□□□□□ -1.51
LRRC28-222ENST00000561431 RBAK-RBAKDNI3L0D1 243 aa5.64□□□□□ -1.51
LRRC28-222ENST00000561431 TPP2P29144 1249 aaPredicted RBP5.64□□□□□ -1.51
LRRC28-222ENST00000561431 KCNJ6P48051 423 aa5.64□□□□□ -1.51
LRRC28-222ENST00000561431 CLCN7P51798 805 aa5.64□□□□□ -1.51
LRRC28-222ENST00000561431 AMPD2Q01433 879 aa5.64□□□□□ -1.51
LRRC28-222ENST00000561431 DPY19L1Q2PZI1 675 aa5.64□□□□□ -1.51
LRRC28-222ENST00000561431 FYB2Q5VWT5 728 aa5.64□□□□□ -1.51
LRRC28-222ENST00000561431 SDE2Q6IQ49 451 aa5.64□□□□□ -1.51
LRRC28-222ENST00000561431 JAZF1Q86VZ6 243 aa5.64□□□□□ -1.51
LRRC28-222ENST00000561431 LILRB2Q8N423 598 aa5.64□□□□□ -1.51
LRRC28-222ENST00000561431 ENOX1Q8TC92 643 aaKnown RBP5.64□□□□□ -1.51
LRRC28-222ENST00000561431 SYTL5Q8TDW5 730 aaPredicted RBP5.64□□□□□ -1.51
LRRC28-222ENST00000561431 SGSM3Q96HU1 749 aa5.64□□□□□ -1.51
LRRC28-222ENST00000561431 RCC1LQ96I51 464 aaKnown RBP5.64□□□□□ -1.51
LRRC28-222ENST00000561431 LGR4Q9BXB1 951 aa5.64□□□□□ -1.51
LRRC28-222ENST00000561431 CGGBP1Q9UFW8 167 aaPredicted RBP5.64□□□□□ -1.51
LRRC28-222ENST00000561431 MINPP1Q9UNW1 487 aa5.64□□□□□ -1.51
LRRC28-222ENST00000561431 CASKIN1Q8WXD9 1431 aa5.64□□□□□ -1.51
LRRC28-222ENST00000561431 NEO1Q92859 1461 aa5.64□□□□□ -1.51
LRRC28-222ENST00000561431 FYCO1Q9BQS8 1478 aa5.64□□□□□ -1.51
LRRC28-222ENST00000561431 TRAV20A0A0B4J274 112 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 SHISA3A0PJX4 238 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 SHOXO15266 292 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 GSNP06396 782 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 CD3EP07766 207 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 C1QTNF9P0C862 333 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 NOP2P46087 812 aaKnown RBP5.63□□□□□ -1.51
LRRC28-222ENST00000561431 PPP2R2AP63151 447 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 POU4F1Q01851 419 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 NKPD1Q17RQ9 610 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 PRR23BQ6ZRT6 265 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 ZNF227Q86WZ6 799 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 HOMER1Q86YM7 354 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 CREG2Q8IUH2 290 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 SPACA3Q8IXA5 215 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 ZNF655Q8N720 491 aaPredicted RBP5.63□□□□□ -1.51
LRRC28-222ENST00000561431 DAGLBQ8NCG7 672 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 APPBP2Q92624 585 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 RNPC3Q96LT9 517 aaKnown RBP5.63□□□□□ -1.51
LRRC28-222ENST00000561431 SLC26A8Q96RN1 970 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 AARSD1Q9BTE6 412 aaKnown RBP5.63□□□□□ -1.51
LRRC28-222ENST00000561431 GPR62Q9BZJ7 368 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 PRR13Q9NZ81 148 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 DUSP13Q9UII6 198 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 CTNND2Q9UQB3 1225 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 CFAP74Q9C0B2 1584 aa5.63□□□□□ -1.51
LRRC28-222ENST00000561431 A0A1W2PQU0 124 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 H0Y8X5 98 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 VAMP4O75379 141 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 CDC45O75419 566 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 SYPP08247 313 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 SNRPB2P08579 225 aaKnown RBP5.62□□□□□ -1.51
LRRC28-222ENST00000561431 FAM153BP0C7A2 387 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 PCBP3P57721 371 aaKnown RBP5.62□□□□□ -1.51
LRRC28-222ENST00000561431 C2orf27AQ580R0 203 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 CRTC3Q6UUV7 619 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 TSPYL5Q86VY4 417 aaPredicted RBP5.62□□□□□ -1.51
LRRC28-222ENST00000561431 AMIGO3Q86WK7 504 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 ARHGEF39Q8N4T4 335 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 ZBTB38Q8NAP3 1195 aaPredicted RBP5.62□□□□□ -1.51
LRRC28-222ENST00000561431 ZSWIM2Q8NEG5 633 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 ASB11Q8WXH4 323 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 TCTN2Q96GX1 697 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 DUSP15Q9H1R2 295 aaPredicted RBP5.62□□□□□ -1.51
LRRC28-222ENST00000561431 SLKQ9H2G2 1235 aaPredicted RBP5.62□□□□□ -1.51
LRRC28-222ENST00000561431 FANCLQ9NW38 375 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 BCCIPQ9P287 314 aaKnown RBP eCLIP5.62□□□□□ -1.51
LRRC28-222ENST00000561431 JAG2Q9Y219 1238 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 GPR55Q9Y2T6 319 aaPredicted RBP5.62□□□□□ -1.51
LRRC28-222ENST00000561431 EMC9Q9Y3B6 208 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 TBX22Q9Y458 520 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 SNX11Q9Y5W9 270 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 TROQ12816 1431 aaPredicted RBP5.62□□□□□ -1.51
LRRC28-222ENST00000561431 CCDC18Q5T9S5 1454 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 RICTORQ6R327 1708 aa5.62□□□□□ -1.51
LRRC28-222ENST00000561431 ESYT3A0FGR9 886 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 FANCAO15360 1455 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 PRODHO43272 600 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 FKTNO75072 461 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 INHBBP09529 407 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 CANXP27824 592 aaKnown RBP5.61□□□□□ -1.51
LRRC28-222ENST00000561431 ECI1P42126 302 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 IKZF1Q13422 519 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 CEP162Q5TB80 1403 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 GTF2IRD2BQ6EKJ0 949 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 THAP5Q7Z6K1 395 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 GTF2IRD2Q86UP8 949 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 TRIM59Q8IWR1 403 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 BTN2A2Q8WVV5 523 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 CDADC1Q9BWV3 514 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms