RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 PXYLP1Q8TE99 480 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 DCAF4Q8WV16 495 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 PIBF1Q8WXW3 757 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 SYAP1Q96A49 352 aaPredicted RBP8.63□□□□□ -1.03
TPM1-231ENST00000561395 PGBD1Q96JS3 809 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 PARK7Q99497 189 aaKnown RBP8.63□□□□□ -1.03
TPM1-231ENST00000561395 SH3GLB2Q9NR46 395 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 TMEM63CQ9P1W3 806 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 LOC285556D6RIA3 1793 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 CDH23Q9H251 3354 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 FRMPD2Q68DX3 1309 aaPredicted RBP8.62□□□□□ -1.03
TPM1-231ENST00000561395 POTEB2H3BUK9 544 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 STXBP3O00186 592 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 CALML3P27482 149 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 FLT3LGP49771 235 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 ZNF445P59923 1031 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 PPATQ06203 517 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 NR5A1Q13285 461 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 STK38Q15208 465 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 CCDC96Q2M329 555 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 ZSCAN23Q3MJ62 389 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 GPATCH4Q5T3I0 446 aaKnown RBP8.62□□□□□ -1.03
TPM1-231ENST00000561395 CCDC183Q5T5S1 534 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 ANO1Q5XXA6 986 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 WWC2Q6AWC2 1192 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 FAM109BQ6ICB4 259 aaPredicted RBP8.62□□□□□ -1.03
TPM1-231ENST00000561395 SIAH1Q8IUQ4 282 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 ANKLE1Q8NAG6 615 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 LINC00301Q8NCQ3 95 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 GMCL1P1Q8NEA9 526 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 CCDC148Q8NFR7 591 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 OXER1Q8TDS5 423 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 GPKOWQ92917 476 aaPredicted RBP eCLIP8.62□□□□□ -1.03
TPM1-231ENST00000561395 TNFRSF25Q93038 417 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.62□□□□□ -1.03
TPM1-231ENST00000561395 RIOX1Q9H6W3 641 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 BRMS1Q9HCU9 246 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 CABP5Q9NP86 173 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 BARHL2Q9NY43 387 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 RAPGEFL1Q9UHV5 662 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 ZBTB21Q9ULJ3 1066 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 SYNPO2Q9UMS6 1093 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 CLIC4Q9Y696 253 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 NCOR1O75376 2440 aa8.62□□□□□ -1.03
TPM1-231ENST00000561395 GOLGA6L4A6NEF3 574 aa8.61□□□□□ -1.03
TPM1-231ENST00000561395 hCG_1984214I3L0E3 225 aa8.61□□□□□ -1.03
TPM1-231ENST00000561395 MAP3K13O43283 966 aa8.61□□□□□ -1.03
TPM1-231ENST00000561395 GTPBP6O43824 516 aaPredicted RBP8.61□□□□□ -1.03
TPM1-231ENST00000561395 CYP2C8P10632 490 aa8.61□□□□□ -1.03
TPM1-231ENST00000561395 NLRP5P59047 1200 aa8.61□□□□□ -1.03
TPM1-231ENST00000561395 IRF5Q13568 498 aa8.61□□□□□ -1.03
TPM1-231ENST00000561395 MOGSQ13724 837 aa8.61□□□□□ -1.03
TPM1-231ENST00000561395 RILPL1Q5EBL4 403 aa8.61□□□□□ -1.03
TPM1-231ENST00000561395 SLFN13Q68D06 897 aa8.61□□□□□ -1.03
TPM1-231ENST00000561395 TYW1BQ6NUM6 668 aa8.61□□□□□ -1.03
TPM1-231ENST00000561395 HEATR3Q7Z4Q2 680 aa8.61□□□□□ -1.03
TPM1-231ENST00000561395 ZNF713Q8N859 430 aaPredicted RBP8.61□□□□□ -1.03
TPM1-231ENST00000561395 DAGLBQ8NCG7 672 aa8.61□□□□□ -1.03
TPM1-231ENST00000561395 MAFAQ8NHW3 353 aaPredicted RBP8.61□□□□□ -1.03
TPM1-231ENST00000561395 RRP36Q96EU6 259 aaKnown RBP8.61□□□□□ -1.03
TPM1-231ENST00000561395 GMCL1Q96IK5 515 aa8.61□□□□□ -1.03
TPM1-231ENST00000561395 CPVLQ9H3G5 476 aa8.61□□□□□ -1.03
TPM1-231ENST00000561395 GPCPD1Q9NPB8 672 aa8.61□□□□□ -1.03
TPM1-231ENST00000561395 SEC63Q9UGP8 760 aaKnown RBP8.61□□□□□ -1.03
TPM1-231ENST00000561395 RLFQ13129 1914 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.6□□□□□ -1.03
TPM1-231ENST00000561395 FSD2A1L4K1 749 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 C19orf67A6NJJ6 358 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 STK25O00506 426 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 TNPO2O14787 897 aaKnown RBP8.6□□□□□ -1.03
TPM1-231ENST00000561395 SPTLC2O15270 562 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 NDUFB10O96000 172 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 LIG1P18858 919 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 INPP5BP32019 993 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 PLA2G5P39877 138 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 CAP2P40123 477 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 SLC1A4P43007 532 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 ME1P48163 572 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 TOB1P50616 345 aaPredicted RBP8.6□□□□□ -1.03
TPM1-231ENST00000561395 SLC39A14Q15043 492 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 PTPAQ15257 358 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 SF3A1Q15459 793 aaKnown RBP8.6□□□□□ -1.03
TPM1-231ENST00000561395 ZNF697Q5TEC3 545 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 DCAF15Q66K64 600 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 GALNT17Q6IS24 598 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 KCTD1Q719H9 257 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 BLIDQ8IZY5 108 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 BICD2Q8TD16 824 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 CCDC12Q8WUD4 166 aaPredicted RBP8.6□□□□□ -1.03
TPM1-231ENST00000561395 SYMPKQ92797 1274 aaKnown RBP8.6□□□□□ -1.03
TPM1-231ENST00000561395 MTMR8Q96EF0 704 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 ZFP91Q96JP5 570 aaPredicted RBP8.6□□□□□ -1.03
TPM1-231ENST00000561395 PIGSQ96S52 555 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 UBA5Q9GZZ9 404 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 C11orf49Q9H6J7 331 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 ARHGEF10LQ9HCE6 1279 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 ISY1Q9ULR0 285 aaKnown RBP8.6□□□□□ -1.03
TPM1-231ENST00000561395 PCDHA7Q9UN72 937 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 PCDHA4Q9UN74 947 aa8.6□□□□□ -1.03
TPM1-231ENST00000561395 KCNH4Q9UQ05 1017 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms