RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 ANO3Q9BYT9 981 aa18.21■□□□□ 0.51
AP4E1-205ENST00000561393 NLRC4Q9NPP4 1024 aa18.21■□□□□ 0.51
AP4E1-205ENST00000561393 COL14A1Q05707 1796 aaKnown RBP18.21■□□□□ 0.51
AP4E1-205ENST00000561393 TUBB4AP04350 444 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 PAFAH1B1P43034 410 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 RAPGEF1Q13905 1077 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 TMTC1Q8IUR5 882 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 PANK4Q9NVE7 773 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.2■□□□□ 0.5
AP4E1-205ENST00000561393 MACROD2A1Z1Q3 448 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 ZBED4O75132 1171 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 RPL13P26373 211 aaKnown RBP18.2■□□□□ 0.5
AP4E1-205ENST00000561393 PKN1Q16512 942 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 HHIPL2Q6UWX4 724 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 SLFN12Q8IYM2 578 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 CUEDC2Q9H467 287 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 IGSF3O75054 1194 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 KRT13P13646 458 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 FAM193AP78312 1265 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 SKIDA1Q1XH10 827 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 IQCEQ6IPM2 695 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 ARHGAP27Q6ZUM4 889 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 MAP3K14Q99558 947 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 IL17RBQ9NRM6 502 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 TMCO5BA8MYB1 307 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 IL1R1P14778 569 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 AMIGO3Q86WK7 504 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 VSTM4Q8IW00 320 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 TAOK3Q9H2K8 898 aa18.2■□□□□ 0.5
AP4E1-205ENST00000561393 GCFC2P16383 781 aaKnown RBP18.19■□□□□ 0.5
AP4E1-205ENST00000561393 ZNF543Q08ER8 600 aa18.19■□□□□ 0.5
AP4E1-205ENST00000561393 CRACR2AQ9BSW2 395 aa18.19■□□□□ 0.5
AP4E1-205ENST00000561393 CARD6Q9BX69 1037 aa18.19■□□□□ 0.5
AP4E1-205ENST00000561393 TMOD4Q9NZQ9 345 aa18.19■□□□□ 0.5
AP4E1-205ENST00000561393 MAD2L2Q9UI95 211 aa18.19■□□□□ 0.5
AP4E1-205ENST00000561393 CLEC11AQ9Y240 323 aa18.19■□□□□ 0.5
AP4E1-205ENST00000561393 PPP4R3AQ6IN85 833 aa18.19■□□□□ 0.5
AP4E1-205ENST00000561393 EHBP1Q8NDI1 1231 aa18.19■□□□□ 0.5
AP4E1-205ENST00000561393 CAPZA3Q96KX2 299 aa18.19■□□□□ 0.5
AP4E1-205ENST00000561393 TUBGCP2Q9BSJ2 902 aa18.19■□□□□ 0.5
AP4E1-205ENST00000561393 TMEM60Q9H2L4 133 aa18.19■□□□□ 0.5
AP4E1-205ENST00000561393 PPP2R2CQ9Y2T4 447 aa18.19■□□□□ 0.5
AP4E1-205ENST00000561393 TRIM49BA6NDI0 452 aa18.19■□□□□ 0.5
AP4E1-205ENST00000561393 EARS2Q5JPH6 523 aaKnown RBP18.19■□□□□ 0.5
AP4E1-205ENST00000561393 OR8K1Q8NGG5 319 aa18.19■□□□□ 0.5
AP4E1-205ENST00000561393 DPF2Q92785 391 aa18.19■□□□□ 0.5
AP4E1-205ENST00000561393 B4DLN1 442 aa18.18■□□□□ 0.5
AP4E1-205ENST00000561393 STXBP3O00186 592 aa18.18■□□□□ 0.5
AP4E1-205ENST00000561393 FAM83BQ5T0W9 1011 aa18.18■□□□□ 0.5
AP4E1-205ENST00000561393 SLC51AQ86UW1 340 aa18.18■□□□□ 0.5
AP4E1-205ENST00000561393 TESPA1A2RU30 521 aaPredicted RBP18.18■□□□□ 0.5
AP4E1-205ENST00000561393 AP5Z1O43299 807 aa18.18■□□□□ 0.5
AP4E1-205ENST00000561393 CNOT6LQ96LI5 555 aaKnown RBP18.18■□□□□ 0.5
AP4E1-205ENST00000561393 PCDHB13Q9Y5F0 798 aa18.18■□□□□ 0.5
AP4E1-205ENST00000561393 DNM2P50570 870 aa18.18■□□□□ 0.5
AP4E1-205ENST00000561393 ETF1P62495 437 aaKnown RBP18.18■□□□□ 0.5
AP4E1-205ENST00000561393 RBL2Q08999 1139 aa18.18■□□□□ 0.5
AP4E1-205ENST00000561393 P2RX5Q93086 422 aa18.18■□□□□ 0.5
AP4E1-205ENST00000561393 MAGEF1Q9HAY2 307 aa18.18■□□□□ 0.5
AP4E1-205ENST00000561393 TUBE1Q9UJT0 475 aa18.18■□□□□ 0.5
AP4E1-205ENST00000561393 PDS5AQ29RF7 1337 aaKnown RBP18.18■□□□□ 0.5
AP4E1-205ENST00000561393 CTAGE15A4D2H0 777 aa18.17■□□□□ 0.5
AP4E1-205ENST00000561393 CTAGE8P0CG41 777 aa18.17■□□□□ 0.5
AP4E1-205ENST00000561393 TM4SF1P30408 202 aa18.17■□□□□ 0.5
AP4E1-205ENST00000561393 CTAGE6Q86UF2 777 aa18.17■□□□□ 0.5
AP4E1-205ENST00000561393 CTAGE4Q8IX94 777 aa18.17■□□□□ 0.5
AP4E1-205ENST00000561393 CCDC102AQ96A19 550 aa18.17■□□□□ 0.5
AP4E1-205ENST00000561393 BPIFA3Q9BQP9 254 aa18.17■□□□□ 0.5
AP4E1-205ENST00000561393 TBC1D10BQ4KMP7 808 aaPredicted RBP18.17■□□□□ 0.5
AP4E1-205ENST00000561393 RDH13Q8NBN7 331 aa18.17■□□□□ 0.5
AP4E1-205ENST00000561393 KCNQ5Q9NR82 932 aa18.17■□□□□ 0.5
AP4E1-205ENST00000561393 TACC1O75410 805 aa18.17■□□□□ 0.5
AP4E1-205ENST00000561393 HOXA10P31260 410 aaPredicted RBP18.17■□□□□ 0.5
AP4E1-205ENST00000561393 PRCPP42785 496 aa18.17■□□□□ 0.5
AP4E1-205ENST00000561393 FMR1Q06787 632 aaKnown RBP eCLIP18.17■□□□□ 0.5
AP4E1-205ENST00000561393 RCSD1Q6JBY9 416 aa18.17■□□□□ 0.5
AP4E1-205ENST00000561393 NKX2-3Q8TAU0 364 aa18.17■□□□□ 0.5
AP4E1-205ENST00000561393 ZNF341Q9BYN7 854 aa18.17■□□□□ 0.5
AP4E1-205ENST00000561393 CCDC169A6NNP5 214 aa18.16■□□□□ 0.5
AP4E1-205ENST00000561393 EPB41P11171 864 aaKnown RBP18.16■□□□□ 0.5
AP4E1-205ENST00000561393 VEGFAP15692 232 aaPredicted RBP18.16■□□□□ 0.5
AP4E1-205ENST00000561393 NF2P35240 595 aa18.16■□□□□ 0.5
AP4E1-205ENST00000561393 LRCH2Q5VUJ6 765 aa18.16■□□□□ 0.5
AP4E1-205ENST00000561393 RRAGAQ7L523 313 aa18.16■□□□□ 0.5
AP4E1-205ENST00000561393 DCAF4Q8WV16 495 aa18.16■□□□□ 0.5
AP4E1-205ENST00000561393 SCLT1Q96NL6 688 aa18.16■□□□□ 0.5
AP4E1-205ENST00000561393 KCNF1Q9H3M0 494 aa18.16■□□□□ 0.5
AP4E1-205ENST00000561393 RWDD2AQ9UIY3 292 aa18.16■□□□□ 0.5
AP4E1-205ENST00000561393 MCTP2Q6DN12 878 aa18.16■□□□□ 0.5
AP4E1-205ENST00000561393 PRDM10Q9NQV6 1147 aa18.16■□□□□ 0.5
AP4E1-205ENST00000561393 STK17AQ9UEE5 414 aa18.16■□□□□ 0.5
AP4E1-205ENST00000561393 STX10O60499 249 aa18.16■□□□□ 0.5
AP4E1-205ENST00000561393 KRT31Q15323 416 aa18.16■□□□□ 0.5
AP4E1-205ENST00000561393 RBM43Q6ZSC3 357 aaKnown RBP18.16■□□□□ 0.5
AP4E1-205ENST00000561393 CCDC84Q86UT8 332 aaPredicted RBP18.16■□□□□ 0.5
AP4E1-205ENST00000561393 NUP58Q9BVL2 599 aa18.16■□□□□ 0.5
AP4E1-205ENST00000561393 POLD4Q9HCU8 107 aa18.16■□□□□ 0.5
AP4E1-205ENST00000561393 ZNF215Q9UL58 517 aaPredicted RBP18.16■□□□□ 0.5
AP4E1-205ENST00000561393 PALM3A6NDB9 673 aaPredicted RBP18.15■□□□□ 0.5
AP4E1-205ENST00000561393 SORBS3O60504 671 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms