RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	MAPK4	P31152	587 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	ADD1	P35611	737 aa	Known RBP	11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	SLC16A2	P36021	539 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	STAT3	P40763	770 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	ERVK-9	P63128	1117 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	ERVK-24	P63145	666 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	HMGN5	P82970	282 aa	Known RBP	11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	FUT2	Q10981	343 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	SCRN1	Q12765	414 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	NTRK3	Q16288	839 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CDC37	Q16543	378 aa	Predicted RBP	11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	RIOX2	Q8IUF8	465 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CCDC144CP	Q8IYA2	1237 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	SRBD1	Q8N5C6	995 aa	Known RBP	11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	SAMD3	Q8N6K7	520 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	REPS2	Q8NFH8	660 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	WASF1	Q92558	559 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	AMN	Q9BXJ7	453 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	UBA5	Q9GZZ9	404 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	SPATC1L	Q9H0A9	340 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	MROH8	Q9H579	483 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	RBPJL	Q9UBG7	517 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	ZNF214	Q9UL59	606 aa	Predicted RBP	11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	KIF3A	Q9Y496	699 aa		11.45	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CNTNAP5	Q8WYK1	1306 aa		11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367		K7ELQ4	463 aa	Predicted RBP	11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CYTH3	O43739	400 aa		11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	STRN	O43815	780 aa		11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	PLEKHA8P1	O95397	391 aa		11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	DEXI	O95424	95 aa		11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	FMNL1	O95466	1100 aa	Predicted RBP	11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CCT2	P78371	535 aa	Known RBP	11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	SSRP1	Q08945	709 aa	Known RBP	11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	KIF22	Q14807	665 aa		11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	TMEM132B	Q14DG7	1078 aa		11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	RASGRP2	Q7LDG7	609 aa		11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	FBXO11	Q86XK2	927 aa		11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	HSCB	Q8IWL3	235 aa		11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CCAR1	Q8IX12	1150 aa	Known RBP	11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	ANKRD13C	Q8N6S4	541 aa		11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	RGS22	Q8NE09	1264 aa		11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CHST13	Q8NET6	341 aa		11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	TMX3	Q96JJ7	454 aa		11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	GLT8D2	Q9H1C3	349 aa		11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	MAP3K20	Q9NYL2	800 aa	Known RBP	11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	TSR3	Q9UJK0	312 aa	Known RBP	11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	RLF	Q13129	1914 aa		11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	PARP14	Q460N5	1801 aa		11.44	□□□□□ -0.58
KNSTRN-215	ENST00000561367	ABCB11	O95342	1321 aa		11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	XBP1	P17861	261 aa		11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	SP3	Q02447	781 aa		11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	STK3	Q13188	491 aa		11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	BECN1	Q14457	450 aa		11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	IFFO2	Q5TF58	517 aa		11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	SNRNP48	Q6IEG0	339 aa	Known RBP	11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	PPP1R18	Q6NYC8	613 aa		11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	NOL8	Q76FK4	1167 aa	Known RBP	11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	NBPF11	Q86T75	865 aa		11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	ABRA	Q8N0Z2	381 aa		11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	ERO1A	Q96HE7	468 aa		11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	INTS4	Q96HW7	963 aa	Known RBP	11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	PAGR1	Q9BTK6	254 aa		11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	NCOA5	Q9HCD5	579 aa	Known RBP	11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	SH3GLB2	Q9NR46	395 aa		11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	BTBD7	Q9P203	1132 aa		11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CCPG1	Q9ULG6	757 aa		11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	MRPL11	Q9Y3B7	192 aa	Known RBP	11.43	□□□□□ -0.58
KNSTRN-215	ENST00000561367	ZNF536	O15090	1300 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	GPR25	O00155	361 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CNMD	O75829	334 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	SCG2	P13521	617 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	PDIA4	P13667	645 aa	Known RBP	11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	LACTB	P83111	547 aa	Predicted RBP	11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CUL4A	Q13619	759 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	PLS1	Q14651	629 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	PFKFB3	Q16875	520 aa	Predicted RBP	11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	QRICH1	Q2TAL8	776 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	MCTP2	Q6DN12	878 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	HOMER1	Q86YM7	354 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	MCF2L2	Q86YR7	1114 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	RAB11FIP4	Q86YS3	637 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CPXCR1	Q8N123	301 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CCDC148	Q8NFR7	591 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	PIGS	Q96S52	555 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	VAT1L	Q9HCJ6	419 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	TXNRD2	Q9NNW7	524 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CPA4	Q9UI42	421 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	IVNS1ABP	Q9Y6Y0	642 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367		V9GY48	417 aa	Predicted RBP	11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CEP350	Q5VT06	3117 aa		11.42	□□□□□ -0.58
KNSTRN-215	ENST00000561367	PFAS	O15067	1338 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	FKTN	O75072	461 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CD2BP2	O95400	341 aa	Known RBP	11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	LARGE1	O95461	756 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	TBC1D8	O95759	1140 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	HOXD10	P28358	340 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms