RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 VPS53Q5VIR6 699 aa13.96□□□□□ -0.17
CARMIL3-204ENST00000561354 SYDE2Q5VT97 1194 aa13.96□□□□□ -0.17
CARMIL3-204ENST00000561354 TTBK2Q6IQ55 1244 aa13.96□□□□□ -0.17
CARMIL3-204ENST00000561354 TICAM2Q86XR7 235 aa13.96□□□□□ -0.17
CARMIL3-204ENST00000561354 ALDH8A1Q9H2A2 487 aaPredicted RBP13.96□□□□□ -0.17
CARMIL3-204ENST00000561354 NKX2-4Q9H2Z4 354 aa13.96□□□□□ -0.17
CARMIL3-204ENST00000561354 HELLSQ9NRZ9 838 aa13.96□□□□□ -0.17
CARMIL3-204ENST00000561354 TCP11L1Q9NUJ3 509 aa13.96□□□□□ -0.17
CARMIL3-204ENST00000561354 THEGQ9P2T0 379 aa13.96□□□□□ -0.17
CARMIL3-204ENST00000561354 YBX2Q9Y2T7 364 aaKnown RBP13.96□□□□□ -0.17
CARMIL3-204ENST00000561354 PRUNE2Q8WUY3 3088 aa13.96□□□□□ -0.18
CARMIL3-204ENST00000561354 LCTP09848 1927 aa13.96□□□□□ -0.18
CARMIL3-204ENST00000561354 NFIBO00712 420 aa13.95□□□□□ -0.18
CARMIL3-204ENST00000561354 PFKMP08237 780 aa13.95□□□□□ -0.18
CARMIL3-204ENST00000561354 SLC16A2P36021 539 aa13.95□□□□□ -0.18
CARMIL3-204ENST00000561354 CPT1AP50416 773 aa13.95□□□□□ -0.18
CARMIL3-204ENST00000561354 PURAQ00577 322 aaKnown RBP13.95□□□□□ -0.18
CARMIL3-204ENST00000561354 PPM1EQ8WY54 764 aa13.95□□□□□ -0.18
CARMIL3-204ENST00000561354 VWCEQ96DN2 955 aa13.95□□□□□ -0.18
CARMIL3-204ENST00000561354 ASB2Q96Q27 587 aa13.95□□□□□ -0.18
CARMIL3-204ENST00000561354 TMEM47Q9BQJ4 181 aa13.95□□□□□ -0.18
CARMIL3-204ENST00000561354 WDR11Q9BZH6 1224 aa13.95□□□□□ -0.18
CARMIL3-204ENST00000561354 MTMR7Q9Y216 660 aa13.95□□□□□ -0.18
CARMIL3-204ENST00000561354 SLC4A7Q9Y6M7 1214 aa13.95□□□□□ -0.18
CARMIL3-204ENST00000561354 MYO9BQ13459 2157 aa13.95□□□□□ -0.18
CARMIL3-204ENST00000561354 FGAP02671 866 aa13.94□□□□□ -0.18
CARMIL3-204ENST00000561354 CLEC4DQ8WXI8 215 aa13.94□□□□□ -0.18
CARMIL3-204ENST00000561354 TTC28Q96AY4 2481 aa13.94□□□□□ -0.18
CARMIL3-204ENST00000561354 TTC14Q96N46 770 aa13.94□□□□□ -0.18
CARMIL3-204ENST00000561354 PCDHA11Q9Y5I1 949 aa13.94□□□□□ -0.18
CARMIL3-204ENST00000561354 TNKSO95271 1327 aa13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 PTPDC1A2A3K4 754 aa13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 NKRFO15226 690 aaKnown RBP eCLIP13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 KPNA6O60684 536 aa13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 PDHBP11177 359 aa13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 PCP11498 1178 aaKnown RBP13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 IGFBP4P22692 258 aa13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 MRPS5P82675 430 aaKnown RBP13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 BRDTQ58F21 947 aaPredicted RBP13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 RNF207Q6ZRF8 634 aa13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 SCLYQ96I15 445 aa13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 MPHOSPH6Q99547 160 aaKnown RBP13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 MTG1Q9BT17 334 aaPredicted RBP13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 GPCPD1Q9NPB8 672 aa13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 GPHNQ9NQX3 736 aaPredicted RBP13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 TOMM22Q9NS69 142 aa13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 TRMT13Q9NUP7 481 aaKnown RBP13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 ZBTB47Q9UFB7 747 aaPredicted RBP13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 GBF1Q92538 1859 aa13.93□□□□□ -0.18
CARMIL3-204ENST00000561354 ZMYM6O95789 1325 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 FRMPD2Q68DX3 1309 aaPredicted RBP13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 WDR19Q8NEZ3 1342 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 A6NJR5 290 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 MYL3P08590 195 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 SNHG28P0DPA3 235 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 CYP2C9P11712 490 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 ATP2A2P16615 1042 aaKnown RBP13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 EDNRBP24530 442 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 CALML3P27482 149 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 RFC2P35250 354 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 RABGGTBP53611 331 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 PDE1AP54750 535 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 RPS6P62753 249 aaKnown RBP13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 PDE4DQ08499 809 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 CCDC85BQ15834 202 aaPredicted RBP13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 MCMDC2Q4G0Z9 681 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 RRP12Q5JTH9 1297 aaKnown RBP13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 ANKRD45Q5TZF3 282 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 PPP2R2DQ66LE6 453 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 NFRKBQ6P4R8 1299 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 SLC30A10Q6XR72 485 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 DNERQ8NFT8 737 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 OR6J1Q8NGC5 347 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 SCFD2Q8WU76 684 aa13.92□□□□□ -0.18
CARMIL3-204ENST00000561354 RAD50Q92878 1312 aa13.91□□□□□ -0.18
CARMIL3-204ENST00000561354 ZBBXA8MT70 800 aa13.91□□□□□ -0.18
CARMIL3-204ENST00000561354 B4DLN1 442 aa13.91□□□□□ -0.18
CARMIL3-204ENST00000561354 PITPNM1O00562 1244 aa13.91□□□□□ -0.18
CARMIL3-204ENST00000561354 HSPD1P10809 573 aaKnown RBP13.91□□□□□ -0.18
CARMIL3-204ENST00000561354 MRPL12P52815 198 aaKnown RBP13.91□□□□□ -0.18
CARMIL3-204ENST00000561354 PTPN11Q06124 597 aaPredicted RBP13.91□□□□□ -0.18
CARMIL3-204ENST00000561354 ZNF543Q08ER8 600 aa13.91□□□□□ -0.18
CARMIL3-204ENST00000561354 TTLL4Q14679 1199 aa13.91□□□□□ -0.18
CARMIL3-204ENST00000561354 PPP2R5BQ15173 497 aa13.91□□□□□ -0.18
CARMIL3-204ENST00000561354 RGS22Q8NE09 1264 aa13.91□□□□□ -0.18
CARMIL3-204ENST00000561354 ADAMTS19Q8TE59 1207 aa13.91□□□□□ -0.18
CARMIL3-204ENST00000561354 FAM227BQ96M60 508 aa13.91□□□□□ -0.18
CARMIL3-204ENST00000561354 MAF1Q9H063 256 aa13.91□□□□□ -0.18
CARMIL3-204ENST00000561354 TSPYL2Q9H2G4 693 aaPredicted RBP13.91□□□□□ -0.18
CARMIL3-204ENST00000561354 GTF3C3Q9Y5Q9 886 aa13.91□□□□□ -0.18
CARMIL3-204ENST00000561354 SPTBN5Q9NRC6 3674 aaKnown RBP13.91□□□□□ -0.18
CARMIL3-204ENST00000561354 SCN10AQ9Y5Y9 1956 aa13.91□□□□□ -0.18
CARMIL3-204ENST00000561354 A0A0D9SFI3 127 aa13.9□□□□□ -0.18
CARMIL3-204ENST00000561354 ACTN1P12814 892 aa13.9□□□□□ -0.18
CARMIL3-204ENST00000561354 MYOGP15173 224 aa13.9□□□□□ -0.18
CARMIL3-204ENST00000561354 POU3F3P20264 500 aaPredicted RBP13.9□□□□□ -0.18
CARMIL3-204ENST00000561354 NBPF20Q3BBV1 942 aa13.9□□□□□ -0.18
CARMIL3-204ENST00000561354 TMEM67Q5HYA8 995 aa13.9□□□□□ -0.18
CARMIL3-204ENST00000561354 MFSD6Q6ZSS7 791 aa13.9□□□□□ -0.18
CARMIL3-204ENST00000561354 PHOSPHO2Q8TCD6 241 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms