RNA–Protein interactions for RNA: ENST00000561314.5

MARK3-226, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 724 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-226ENST00000561314 RNF208Q9H0X6 261 aa12.54□□□□□ -0.4
MARK3-226ENST00000561314 PAK6Q9NQU5 681 aaPredicted RBP12.54□□□□□ -0.4
MARK3-226ENST00000561314 RBM28Q9NW13 759 aaKnown RBP12.54□□□□□ -0.4
MARK3-226ENST00000561314 MRPL11Q9Y3B7 192 aaKnown RBP12.54□□□□□ -0.4
MARK3-226ENST00000561314 ASTN1O14525 1302 aa12.54□□□□□ -0.4
MARK3-226ENST00000561314 PFASO15067 1338 aa12.54□□□□□ -0.4
MARK3-226ENST00000561314 ABCB11O95342 1321 aa12.54□□□□□ -0.4
MARK3-226ENST00000561314 POTEFA5A3E0 1075 aa12.53□□□□□ -0.4
MARK3-226ENST00000561314 SNAI1O95863 264 aaPredicted RBP12.53□□□□□ -0.4
MARK3-226ENST00000561314 RBM25P49756 843 aaKnown RBP12.53□□□□□ -0.4
MARK3-226ENST00000561314 RPS6P62753 249 aaKnown RBP12.53□□□□□ -0.4
MARK3-226ENST00000561314 GHRHRQ02643 423 aa12.53□□□□□ -0.4
MARK3-226ENST00000561314 TRAF1Q13077 416 aa12.53□□□□□ -0.4
MARK3-226ENST00000561314 NTRK3Q16288 839 aa12.53□□□□□ -0.4
MARK3-226ENST00000561314 PRAMEF19Q5SWL8 479 aa12.53□□□□□ -0.4
MARK3-226ENST00000561314 IFFO2Q5TF58 517 aa12.53□□□□□ -0.4
MARK3-226ENST00000561314 NSMFQ6X4W1 530 aa12.53□□□□□ -0.4
MARK3-226ENST00000561314 HOMER1Q86YM7 354 aa12.53□□□□□ -0.4
MARK3-226ENST00000561314 RRP36Q96EU6 259 aaKnown RBP12.53□□□□□ -0.4
MARK3-226ENST00000561314 LARP6Q9BRS8 491 aaKnown RBP12.53□□□□□ -0.4
MARK3-226ENST00000561314 TMEM106CQ9BVX2 250 aa12.53□□□□□ -0.4
MARK3-226ENST00000561314 C22orf23Q9BZE7 217 aa12.53□□□□□ -0.4
MARK3-226ENST00000561314 HMX1Q9NP08 348 aaPredicted RBP12.53□□□□□ -0.4
MARK3-226ENST00000561314 V9GY48 417 aaPredicted RBP12.53□□□□□ -0.4
MARK3-226ENST00000561314 CEP290O15078 2479 aa12.53□□□□□ -0.4
MARK3-226ENST00000561314 DNAH12Q6ZR08 3092 aa12.53□□□□□ -0.4
MARK3-226ENST00000561314 CCDC196A0A1B0GTZ2 297 aa12.52□□□□□ -0.41
MARK3-226ENST00000561314 hCG_1642624A0A1W2PR95 340 aa12.52□□□□□ -0.41
MARK3-226ENST00000561314 GOLGA8AA7E2F4 631 aa12.52□□□□□ -0.41
MARK3-226ENST00000561314 GOLGA8BA8MQT2 603 aa12.52□□□□□ -0.41
MARK3-226ENST00000561314 PYGBP11216 843 aa12.52□□□□□ -0.41
MARK3-226ENST00000561314 CCND3P30281 292 aaPredicted RBP12.52□□□□□ -0.41
MARK3-226ENST00000561314 RGS19P49795 217 aa12.52□□□□□ -0.41
MARK3-226ENST00000561314 METAP2P50579 478 aaKnown RBP eCLIP12.52□□□□□ -0.41
MARK3-226ENST00000561314 LHX8Q68G74 356 aa12.52□□□□□ -0.41
MARK3-226ENST00000561314 RNF207Q6ZRF8 634 aa12.52□□□□□ -0.41
MARK3-226ENST00000561314 MCF2L2Q86YR7 1114 aa12.52□□□□□ -0.41
MARK3-226ENST00000561314 PIBF1Q8WXW3 757 aa12.52□□□□□ -0.41
MARK3-226ENST00000561314 BACH2Q9BYV9 841 aa12.52□□□□□ -0.41
MARK3-226ENST00000561314 NRBP1Q9UHY1 535 aa12.52□□□□□ -0.41
MARK3-226ENST00000561314 SYNGAP1Q96PV0 1343 aa12.52□□□□□ -0.41
MARK3-226ENST00000561314 NID2Q14112 1375 aa12.52□□□□□ -0.41
MARK3-226ENST00000561314 ZNF236Q9UL36 1845 aa12.51□□□□□ -0.41
MARK3-226ENST00000561314 PTPDC1A2A3K4 754 aa12.51□□□□□ -0.41
MARK3-226ENST00000561314 SGPL1O95470 568 aa12.51□□□□□ -0.41
MARK3-226ENST00000561314 ZNF865P0CJ78 1059 aaPredicted RBP12.51□□□□□ -0.41
MARK3-226ENST00000561314 CYBAP13498 195 aa12.51□□□□□ -0.41
MARK3-226ENST00000561314 EN2P19622 333 aaPredicted RBP12.51□□□□□ -0.41
MARK3-226ENST00000561314 CALML3P27482 149 aa12.51□□□□□ -0.41
MARK3-226ENST00000561314 GJA8P48165 433 aa12.51□□□□□ -0.41
MARK3-226ENST00000561314 HSD17B4P51659 736 aa12.51□□□□□ -0.41
MARK3-226ENST00000561314 NEK4P51957 841 aa12.51□□□□□ -0.41
MARK3-226ENST00000561314 AK2P54819 239 aa12.51□□□□□ -0.41
MARK3-226ENST00000561314 SOX10P56693 466 aa12.51□□□□□ -0.41
MARK3-226ENST00000561314 SLC30A10Q6XR72 485 aa12.51□□□□□ -0.41
MARK3-226ENST00000561314 SAMD3Q8N6K7 520 aa12.51□□□□□ -0.41
MARK3-226ENST00000561314 SYTL5Q8TDW5 730 aaPredicted RBP12.51□□□□□ -0.41
MARK3-226ENST00000561314 MORC4Q8TE76 937 aa12.51□□□□□ -0.41
MARK3-226ENST00000561314 DEFB118Q96PH6 123 aa12.51□□□□□ -0.41
MARK3-226ENST00000561314 KATNBL1Q9H079 304 aa12.51□□□□□ -0.41
MARK3-226ENST00000561314 CRISPLD2Q9H0B8 497 aa12.51□□□□□ -0.41
MARK3-226ENST00000561314 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.51□□□□□ -0.41
MARK3-226ENST00000561314 MAP3K20Q9NYL2 800 aaKnown RBP12.51□□□□□ -0.41
MARK3-226ENST00000561314 COL20A1Q9P218 1284 aa12.51□□□□□ -0.41
MARK3-226ENST00000561314 TPCN1Q9ULQ1 816 aa12.51□□□□□ -0.41
MARK3-226ENST00000561314 NAP1L2Q9ULW6 460 aaPredicted RBP12.51□□□□□ -0.41
MARK3-226ENST00000561314 IFNAR1P17181 557 aa12.5□□□□□ -0.41
MARK3-226ENST00000561314 CCT2P78371 535 aaKnown RBP12.5□□□□□ -0.41
MARK3-226ENST00000561314 ANKRD1Q15327 319 aa12.5□□□□□ -0.41
MARK3-226ENST00000561314 U2AF1L4Q8WU68 220 aaKnown RBP12.5□□□□□ -0.41
MARK3-226ENST00000561314 TAAR1Q96RJ0 339 aa12.5□□□□□ -0.41
MARK3-226ENST00000561314 NCOA5Q9HCD5 579 aaKnown RBP12.5□□□□□ -0.41
MARK3-226ENST00000561314 DDX49Q9Y6V7 483 aaKnown RBP12.5□□□□□ -0.41
MARK3-226ENST00000561314 CNTNAP5Q8WYK1 1306 aa12.5□□□□□ -0.41
MARK3-226ENST00000561314 PDE4DIPQ5VU43 2346 aa12.5□□□□□ -0.41
MARK3-226ENST00000561314 LOC102724159A0A0B4J2E5 919 aa12.49□□□□□ -0.41
MARK3-226ENST00000561314 ASB14A6NK59 587 aa12.49□□□□□ -0.41
MARK3-226ENST00000561314 PRPF3O43395 683 aaKnown RBP12.49□□□□□ -0.41
MARK3-226ENST00000561314 PFKFB2O60825 505 aa12.49□□□□□ -0.41
MARK3-226ENST00000561314 CFBP00751 764 aa12.49□□□□□ -0.41
MARK3-226ENST00000561314 CAPN2P17655 700 aa12.49□□□□□ -0.41
MARK3-226ENST00000561314 EDNRBP24530 442 aa12.49□□□□□ -0.41
MARK3-226ENST00000561314 ACVR2BQ13705 512 aa12.49□□□□□ -0.41
MARK3-226ENST00000561314 PWP2Q15269 919 aaKnown RBP12.49□□□□□ -0.41
MARK3-226ENST00000561314 PKN1Q16512 942 aa12.49□□□□□ -0.41
MARK3-226ENST00000561314 ARMCX2Q7L311 632 aa12.49□□□□□ -0.41
MARK3-226ENST00000561314 DNERQ8NFT8 737 aa12.49□□□□□ -0.41
MARK3-226ENST00000561314 SHISA4Q96DD7 197 aa12.49□□□□□ -0.41
MARK3-226ENST00000561314 ABHD16BQ9H3Z7 469 aa12.49□□□□□ -0.41
MARK3-226ENST00000561314 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.49□□□□□ -0.41
MARK3-226ENST00000561314 ADD3Q9UEY8 706 aaKnown RBP12.49□□□□□ -0.41
MARK3-226ENST00000561314 SEC63Q9UGP8 760 aaKnown RBP12.49□□□□□ -0.41
MARK3-226ENST00000561314 OGDHLQ9ULD0 1010 aa12.49□□□□□ -0.41
MARK3-226ENST00000561314 TNRC18O15417 2968 aaPredicted RBP12.49□□□□□ -0.41
MARK3-226ENST00000561314 GCOM1H8Y6P7 765 aaPredicted RBP12.48□□□□□ -0.41
MARK3-226ENST00000561314 MEIS2O14770 477 aa12.48□□□□□ -0.41
MARK3-226ENST00000561314 SEPT4O43236 478 aa12.48□□□□□ -0.41
MARK3-226ENST00000561314 POLR2MP0CAP2 368 aa12.48□□□□□ -0.41
MARK3-226ENST00000561314 ALDH5A1P51649 535 aaPredicted RBP12.48□□□□□ -0.41
MARK3-226ENST00000561314 WWC2Q6AWC2 1192 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms