RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 C6orf222P0C671 652 aaPredicted RBP14.78□□□□□ -0.04
CHRNA3-208ENST00000561128 RXRAP19793 462 aa14.78□□□□□ -0.04
CHRNA3-208ENST00000561128 EDNRBP24530 442 aa14.78□□□□□ -0.04
CHRNA3-208ENST00000561128 CST5P28325 142 aaPredicted RBP14.78□□□□□ -0.04
CHRNA3-208ENST00000561128 GJA9P57773 515 aa14.78□□□□□ -0.04
CHRNA3-208ENST00000561128 RNF207Q6ZRF8 634 aa14.78□□□□□ -0.04
CHRNA3-208ENST00000561128 RASEFQ8IZ41 740 aa14.78□□□□□ -0.04
CHRNA3-208ENST00000561128 TRIM43Q96BQ3 446 aaPredicted RBP14.78□□□□□ -0.04
CHRNA3-208ENST00000561128 LRCH3Q96II8 777 aa14.78□□□□□ -0.04
CHRNA3-208ENST00000561128 CCDC136Q96JN2 1154 aa14.78□□□□□ -0.04
CHRNA3-208ENST00000561128 TCEANC2Q96MN5 208 aa14.78□□□□□ -0.04
CHRNA3-208ENST00000561128 ASB14A6NK59 587 aa14.77□□□□□ -0.05
CHRNA3-208ENST00000561128 SH2B2O14492 632 aaPredicted RBP14.77□□□□□ -0.05
CHRNA3-208ENST00000561128 PRC1O43663 620 aa14.77□□□□□ -0.05
CHRNA3-208ENST00000561128 DHX16O60231 1041 aaKnown RBP14.77□□□□□ -0.05
CHRNA3-208ENST00000561128 ARIH2O95376 493 aa14.77□□□□□ -0.05
CHRNA3-208ENST00000561128 TNFAIP2Q03169 654 aa14.77□□□□□ -0.05
CHRNA3-208ENST00000561128 TLE2Q04725 743 aa14.77□□□□□ -0.05
CHRNA3-208ENST00000561128 TRDNQ13061 729 aa14.77□□□□□ -0.05
CHRNA3-208ENST00000561128 WTAPQ15007 396 aa14.77□□□□□ -0.05
CHRNA3-208ENST00000561128 ADCK5Q3MIX3 580 aa14.77□□□□□ -0.05
CHRNA3-208ENST00000561128 RNF180Q86T96 592 aa14.77□□□□□ -0.05
CHRNA3-208ENST00000561128 TLK2Q86UE8 772 aa14.77□□□□□ -0.05
CHRNA3-208ENST00000561128 SYTL5Q8TDW5 730 aaPredicted RBP14.77□□□□□ -0.05
CHRNA3-208ENST00000561128 PPP1R13LQ8WUF5 828 aa14.77□□□□□ -0.05
CHRNA3-208ENST00000561128 COPS5Q92905 334 aa14.77□□□□□ -0.05
CHRNA3-208ENST00000561128 TAAR1Q96RJ0 339 aa14.77□□□□□ -0.05
CHRNA3-208ENST00000561128 PIGSQ96S52 555 aa14.77□□□□□ -0.05
CHRNA3-208ENST00000561128 ABCB11O95342 1321 aa14.76□□□□□ -0.05
CHRNA3-208ENST00000561128 CDC45O75419 566 aa14.76□□□□□ -0.05
CHRNA3-208ENST00000561128 PLEKHA8P1O95397 391 aa14.76□□□□□ -0.05
CHRNA3-208ENST00000561128 ASGR1P07306 291 aa14.76□□□□□ -0.05
CHRNA3-208ENST00000561128 NKX3-2P78367 333 aa14.76□□□□□ -0.05
CHRNA3-208ENST00000561128 FBXO11Q86XK2 927 aa14.76□□□□□ -0.05
CHRNA3-208ENST00000561128 HOMER1Q86YM7 354 aa14.76□□□□□ -0.05
CHRNA3-208ENST00000561128 ZNF654Q8IZM8 581 aa14.76□□□□□ -0.05
CHRNA3-208ENST00000561128 IL31RAQ8NI17 732 aa14.76□□□□□ -0.05
CHRNA3-208ENST00000561128 PIBF1Q8WXW3 757 aa14.76□□□□□ -0.05
CHRNA3-208ENST00000561128 PRDM5Q9NQX1 630 aaPredicted RBP14.76□□□□□ -0.05
CHRNA3-208ENST00000561128 BAZ2BQ9UIF8 2168 aaKnown RBP14.75□□□□□ -0.05
CHRNA3-208ENST00000561128 GRIN2DO15399 1336 aa14.75□□□□□ -0.05
CHRNA3-208ENST00000561128 PQBP1O60828 265 aaKnown RBP14.75□□□□□ -0.05
CHRNA3-208ENST00000561128 CXCL17Q6UXB2 119 aa14.75□□□□□ -0.05
CHRNA3-208ENST00000561128 KIAA1211Q6ZU35 1233 aa14.75□□□□□ -0.05
CHRNA3-208ENST00000561128 CMTR1Q8N1G2 835 aaKnown RBP14.75□□□□□ -0.05
CHRNA3-208ENST00000561128 TSEN34Q9BSV6 310 aaKnown RBP14.75□□□□□ -0.05
CHRNA3-208ENST00000561128 RIOX1Q9H6W3 641 aa14.75□□□□□ -0.05
CHRNA3-208ENST00000561128 VTA1Q9NP79 307 aa14.75□□□□□ -0.05
CHRNA3-208ENST00000561128 RBM47A0AV96 593 aaKnown RBP14.74□□□□□ -0.05
CHRNA3-208ENST00000561128 DYNC1LI2O43237 492 aaPredicted RBP14.74□□□□□ -0.05
CHRNA3-208ENST00000561128 CPA1P15085 419 aa14.74□□□□□ -0.05
CHRNA3-208ENST00000561128 HOXA13P31271 388 aaPredicted RBP14.74□□□□□ -0.05
CHRNA3-208ENST00000561128 BMP8BP34820 402 aa14.74□□□□□ -0.05
CHRNA3-208ENST00000561128 EPHB4P54760 987 aa14.74□□□□□ -0.05
CHRNA3-208ENST00000561128 PSMC6P62333 389 aa14.74□□□□□ -0.05
CHRNA3-208ENST00000561128 GNASQ5JWF2 1037 aa14.74□□□□□ -0.05
CHRNA3-208ENST00000561128 C1orf53Q5VUE5 145 aa14.74□□□□□ -0.05
CHRNA3-208ENST00000561128 NOL8Q76FK4 1167 aaKnown RBP14.74□□□□□ -0.05
CHRNA3-208ENST00000561128 NUP133Q8WUM0 1156 aa14.74□□□□□ -0.05
CHRNA3-208ENST00000561128 STARD7Q9NQZ5 370 aa14.74□□□□□ -0.05
CHRNA3-208ENST00000561128 KIAA1217Q5T5P2 1943 aa14.73□□□□□ -0.05
CHRNA3-208ENST00000561128 MOXD2PA6NHM9 499 aa14.73□□□□□ -0.05
CHRNA3-208ENST00000561128 ZBTB5O15062 677 aa14.73□□□□□ -0.05
CHRNA3-208ENST00000561128 EIF2AK2P19525 551 aaKnown RBP14.73□□□□□ -0.05
CHRNA3-208ENST00000561128 HSD17B4P51659 736 aa14.73□□□□□ -0.05
CHRNA3-208ENST00000561128 FAAP100Q0VG06 881 aa14.73□□□□□ -0.05
CHRNA3-208ENST00000561128 FSCN1Q16658 493 aaKnown RBP14.73□□□□□ -0.05
CHRNA3-208ENST00000561128 BADQ92934 168 aa14.73□□□□□ -0.05
CHRNA3-208ENST00000561128 ZFP91Q96JP5 570 aaPredicted RBP14.73□□□□□ -0.05
CHRNA3-208ENST00000561128 WDR11Q9BZH6 1224 aa14.73□□□□□ -0.05
CHRNA3-208ENST00000561128 UBE2OQ9C0C9 1292 aaKnown RBP14.73□□□□□ -0.05
CHRNA3-208ENST00000561128 hCG_1642624A0A1W2PR95 340 aa14.72□□□□□ -0.05
CHRNA3-208ENST00000561128 ERICH2A1L162 156 aa14.72□□□□□ -0.05
CHRNA3-208ENST00000561128 CFBP00751 764 aa14.72□□□□□ -0.05
CHRNA3-208ENST00000561128 CDK7P50613 346 aa14.72□□□□□ -0.05
CHRNA3-208ENST00000561128 GHRHRQ02643 423 aa14.72□□□□□ -0.05
CHRNA3-208ENST00000561128 PDE4DQ08499 809 aa14.72□□□□□ -0.05
CHRNA3-208ENST00000561128 DUSP28Q4G0W2 176 aa14.72□□□□□ -0.05
CHRNA3-208ENST00000561128 C9orf50Q5SZB4 431 aa14.72□□□□□ -0.05
CHRNA3-208ENST00000561128 ANKRD33Q7Z3H0 272 aa14.72□□□□□ -0.05
CHRNA3-208ENST00000561128 SRBD1Q8N5C6 995 aaKnown RBP14.72□□□□□ -0.05
CHRNA3-208ENST00000561128 RGS22Q8NE09 1264 aa14.72□□□□□ -0.05
CHRNA3-208ENST00000561128 DNERQ8NFT8 737 aa14.72□□□□□ -0.05
CHRNA3-208ENST00000561128 AMNQ9BXJ7 453 aa14.72□□□□□ -0.05
CHRNA3-208ENST00000561128 ADD3Q9UEY8 706 aaKnown RBP14.72□□□□□ -0.05
CHRNA3-208ENST00000561128 UMODL1Q5DID0 1318 aa14.71□□□□□ -0.05
CHRNA3-208ENST00000561128 RGS20O76081 388 aa14.71□□□□□ -0.05
CHRNA3-208ENST00000561128 DDAH1O94760 285 aa14.71□□□□□ -0.05
CHRNA3-208ENST00000561128 CLTBP09497 229 aa14.71□□□□□ -0.05
CHRNA3-208ENST00000561128 MCM5P33992 734 aa14.71□□□□□ -0.05
CHRNA3-208ENST00000561128 SART3Q15020 963 aaKnown RBP14.71□□□□□ -0.05
CHRNA3-208ENST00000561128 IQSEC1Q6DN90 963 aa14.71□□□□□ -0.05
CHRNA3-208ENST00000561128 CCDC62Q6P9F0 684 aa14.71□□□□□ -0.05
CHRNA3-208ENST00000561128 CATIPQ7Z7H3 387 aa14.71□□□□□ -0.05
CHRNA3-208ENST00000561128 FAM126BQ8IXS8 530 aa14.71□□□□□ -0.05
CHRNA3-208ENST00000561128 TDHQ8IZJ6 230 aa14.71□□□□□ -0.05
CHRNA3-208ENST00000561128 GPKOWQ92917 476 aaPredicted RBP eCLIP14.71□□□□□ -0.05
CHRNA3-208ENST00000561128 PXMP2Q9NR77 195 aa14.71□□□□□ -0.05
CHRNA3-208ENST00000561128 TBX21Q9UL17 535 aa14.71□□□□□ -0.05
CHRNA3-208ENST00000561128 BRPF3Q9ULD4 1205 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms