RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 MFSD5Q6N075 450 aa19.02■□□□□ 0.64
SNX1-213ENST00000561026 RNF207Q6ZRF8 634 aa19.02■□□□□ 0.64
SNX1-213ENST00000561026 SLC43A3Q8NBI5 491 aa19.02■□□□□ 0.64
SNX1-213ENST00000561026 PNMA1Q8ND90 353 aa19.02■□□□□ 0.64
SNX1-213ENST00000561026 ZSWIM5Q9P217 1185 aa19.02■□□□□ 0.64
SNX1-213ENST00000561026 CDH23Q9H251 3354 aa19.01■□□□□ 0.63
SNX1-213ENST00000561026 B4E1Z4 1266 aa19.01■□□□□ 0.63
SNX1-213ENST00000561026 TLR3O15455 904 aaKnown RBP19.01■□□□□ 0.63
SNX1-213ENST00000561026 RPS6P62753 249 aaKnown RBP19.01■□□□□ 0.63
SNX1-213ENST00000561026 DUSP28Q4G0W2 176 aa19.01■□□□□ 0.63
SNX1-213ENST00000561026 SLC30A10Q6XR72 485 aa19.01■□□□□ 0.63
SNX1-213ENST00000561026 ZSCAN10Q96SZ4 725 aaPredicted RBP19.01■□□□□ 0.63
SNX1-213ENST00000561026 UBA5Q9GZZ9 404 aa19.01■□□□□ 0.63
SNX1-213ENST00000561026 KAT14Q9H8E8 782 aa19.01■□□□□ 0.63
SNX1-213ENST00000561026 LCTP09848 1927 aa19■□□□□ 0.63
SNX1-213ENST00000561026 CD4P01730 458 aa19■□□□□ 0.63
SNX1-213ENST00000561026 ITGA7Q13683 1181 aa19■□□□□ 0.63
SNX1-213ENST00000561026 ENAHQ8N8S7 591 aaPredicted RBP19■□□□□ 0.63
SNX1-213ENST00000561026 WDR11Q9BZH6 1224 aa19■□□□□ 0.63
SNX1-213ENST00000561026 CPVLQ9H3G5 476 aa19■□□□□ 0.63
SNX1-213ENST00000561026 SEMA6BQ9H3T3 888 aa19■□□□□ 0.63
SNX1-213ENST00000561026 GRIN2DO15399 1336 aa19■□□□□ 0.63
SNX1-213ENST00000561026 LRRC37A2A6NM11 1700 aa18.99■□□□□ 0.63
SNX1-213ENST00000561026 RBM47A0AV96 593 aaKnown RBP18.99■□□□□ 0.63
SNX1-213ENST00000561026 PDE4AP27815 886 aa18.99■□□□□ 0.63
SNX1-213ENST00000561026 RGS22Q8NE09 1264 aa18.99■□□□□ 0.63
SNX1-213ENST00000561026 DNERQ8NFT8 737 aa18.99■□□□□ 0.63
SNX1-213ENST00000561026 SEZ6LQ9BYH1 1024 aa18.99■□□□□ 0.63
SNX1-213ENST00000561026 KRT23Q9C075 422 aa18.99■□□□□ 0.63
SNX1-213ENST00000561026 IL25Q9H293 177 aa18.99■□□□□ 0.63
SNX1-213ENST00000561026 UNC80Q8N2C7 3258 aa18.99■□□□□ 0.63
SNX1-213ENST00000561026 PPIGQ13427 754 aaKnown RBP eCLIP18.98■□□□□ 0.632e-7■■□□□ 12.1
SNX1-213ENST00000561026 USH1GQ495M9 461 aa18.98■□□□□ 0.63
SNX1-213ENST00000561026 C16orf59Q7L2K0 433 aa18.98■□□□□ 0.63
SNX1-213ENST00000561026 TMEM199Q8N511 208 aa18.98■□□□□ 0.63
SNX1-213ENST00000561026 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.98■□□□□ 0.633e-7■■□□□ 11.8
SNX1-213ENST00000561026 CNNM2Q9H8M5 875 aa18.98■□□□□ 0.63
SNX1-213ENST00000561026 TNKSO95271 1327 aa18.98■□□□□ 0.63
SNX1-213ENST00000561026 GSPT1P15170 499 aaKnown RBP18.97■□□□□ 0.63
SNX1-213ENST00000561026 CSF2RAP15509 400 aa18.97■□□□□ 0.63
SNX1-213ENST00000561026 EDNRBP24530 442 aa18.97■□□□□ 0.63
SNX1-213ENST00000561026 PDE4DQ08499 809 aa18.97■□□□□ 0.63
SNX1-213ENST00000561026 ASPRV1Q53RT3 343 aa18.97■□□□□ 0.63
SNX1-213ENST00000561026 TTC22Q5TAA0 569 aa18.97■□□□□ 0.63
SNX1-213ENST00000561026 ADGRF4Q8IZF3 695 aa18.97■□□□□ 0.63
SNX1-213ENST00000561026 MPHOSPH6Q99547 160 aaKnown RBP18.97■□□□□ 0.63
SNX1-213ENST00000561026 CDX2Q99626 313 aaPredicted RBP18.97■□□□□ 0.63
SNX1-213ENST00000561026 PPP1R12CQ9BZL4 782 aa18.97■□□□□ 0.63
SNX1-213ENST00000561026 TTYH1Q9H313 450 aaPredicted RBP18.97■□□□□ 0.63
SNX1-213ENST00000561026 LAMA4Q16363 1823 aa18.97■□□□□ 0.63
SNX1-213ENST00000561026 EYSQ5T1H1 3165 aa18.96■□□□□ 0.63
SNX1-213ENST00000561026 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.96■□□□□ 0.63
SNX1-213ENST00000561026 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.96■□□□□ 0.63
SNX1-213ENST00000561026 PSMC6P62333 389 aa18.96■□□□□ 0.63
SNX1-213ENST00000561026 CDC37Q16543 378 aaPredicted RBP18.96■□□□□ 0.63
SNX1-213ENST00000561026 UBAC1Q9BSL1 405 aa18.96■□□□□ 0.63
SNX1-213ENST00000561026 MAF1Q9H063 256 aa18.96■□□□□ 0.63
SNX1-213ENST00000561026 B4DLN1 442 aa18.95■□□□□ 0.62
SNX1-213ENST00000561026 PARP1P09874 1014 aaKnown RBP18.95■□□□□ 0.62
SNX1-213ENST00000561026 CYP2C18P33260 490 aa18.95■□□□□ 0.62
SNX1-213ENST00000561026 MRPL12P52815 198 aaKnown RBP18.95■□□□□ 0.62
SNX1-213ENST00000561026 TMEM240Q5SV17 173 aa18.95■□□□□ 0.62
SNX1-213ENST00000561026 TRPV6Q9H1D0 765 aa18.95■□□□□ 0.62
SNX1-213ENST00000561026 HIPK3Q9H422 1215 aa18.95■□□□□ 0.62
SNX1-213ENST00000561026 TMEM265A0A087WTH1 108 aa18.94■□□□□ 0.62
SNX1-213ENST00000561026 DLL1O00548 723 aa18.94■□□□□ 0.62
SNX1-213ENST00000561026 NKRFO15226 690 aaKnown RBP eCLIP18.94■□□□□ 0.62
SNX1-213ENST00000561026 B4GALT4O60513 344 aa18.94■□□□□ 0.62
SNX1-213ENST00000561026 CPT1AP50416 773 aa18.94■□□□□ 0.62
SNX1-213ENST00000561026 SCFD2Q8WU76 684 aa18.94■□□□□ 0.62
SNX1-213ENST00000561026 TBC1D5Q92609 795 aa18.94■□□□□ 0.62
SNX1-213ENST00000561026 POLR3EQ9NVU0 708 aa18.94■□□□□ 0.62
SNX1-213ENST00000561026 ABCB11O95342 1321 aa18.94■□□□□ 0.62
SNX1-213ENST00000561026 ACRP10323 421 aa18.93■□□□□ 0.62
SNX1-213ENST00000561026 PURAQ00577 322 aaKnown RBP18.93■□□□□ 0.62
SNX1-213ENST00000561026 PPP2R5BQ15173 497 aa18.93■□□□□ 0.62
SNX1-213ENST00000561026 QRICH1Q2TAL8 776 aa18.93■□□□□ 0.62
SNX1-213ENST00000561026 IFIT1BQ5T764 474 aaKnown RBP18.93■□□□□ 0.62
SNX1-213ENST00000561026 RASIP1Q5U651 963 aa18.93■□□□□ 0.62
SNX1-213ENST00000561026 ZNF365Q70YC5 407 aa18.93■□□□□ 0.62
SNX1-213ENST00000561026 OR6J1Q8NGC5 347 aa18.93■□□□□ 0.62
SNX1-213ENST00000561026 ALDH8A1Q9H2A2 487 aaPredicted RBP18.93■□□□□ 0.62
SNX1-213ENST00000561026 JMJD4Q9H9V9 463 aa18.93■□□□□ 0.62
SNX1-213ENST00000561026 VAT1LQ9HCJ6 419 aa18.93■□□□□ 0.62
SNX1-213ENST00000561026 RAD50Q92878 1312 aa18.93■□□□□ 0.62
SNX1-213ENST00000561026 DHX16O60231 1041 aaKnown RBP18.93■□□□□ 0.62
SNX1-213ENST00000561026 TXNP10599 105 aaKnown RBP18.93■□□□□ 0.62
SNX1-213ENST00000561026 DNAJB2P25686 324 aa18.93■□□□□ 0.62
SNX1-213ENST00000561026 SEC23AQ15436 765 aa18.93■□□□□ 0.62
SNX1-213ENST00000561026 BRDTQ58F21 947 aaPredicted RBP18.93■□□□□ 0.62
SNX1-213ENST00000561026 PSRC1Q6PGN9 363 aaPredicted RBP18.93■□□□□ 0.62
SNX1-213ENST00000561026 CYB5R4Q7L1T6 521 aa18.93■□□□□ 0.62
SNX1-213ENST00000561026 FBXO11Q86XK2 927 aa18.93■□□□□ 0.62
SNX1-213ENST00000561026 MCF2L2Q86YR7 1114 aa18.93■□□□□ 0.62
SNX1-213ENST00000561026 SYTL5Q8TDW5 730 aaPredicted RBP18.93■□□□□ 0.62
SNX1-213ENST00000561026 RUFY2Q8WXA3 655 aa18.93■□□□□ 0.62
SNX1-213ENST00000561026 NOC4LQ9BVI4 516 aaKnown RBP18.93■□□□□ 0.62
SNX1-213ENST00000561026 IL23AQ9NPF7 189 aa18.93■□□□□ 0.62
SNX1-213ENST00000561026 GPHNQ9NQX3 736 aaPredicted RBP18.93■□□□□ 0.62
SNX1-213ENST00000561026 A6NJR5 290 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms