RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 IQCA1Q86XH1 822 aa6.42□□□□□ -1.38
ZEB1-220ENST00000560909 CRACR2BQ8N4Y2 399 aaPredicted RBP6.42□□□□□ -1.38
ZEB1-220ENST00000560909 PRR7Q8TB68 274 aa6.42□□□□□ -1.38
ZEB1-220ENST00000560909 ZNF274Q96GC6 653 aaPredicted RBP6.42□□□□□ -1.38
ZEB1-220ENST00000560909 ZSCAN10Q96SZ4 725 aaPredicted RBP6.42□□□□□ -1.38
ZEB1-220ENST00000560909 GPBP1L1Q9HC44 474 aaPredicted RBP6.42□□□□□ -1.38
ZEB1-220ENST00000560909 ZBTB21Q9ULJ3 1066 aa6.42□□□□□ -1.38
ZEB1-220ENST00000560909 ANGEL1Q9UNK9 670 aaKnown RBP6.42□□□□□ -1.38
ZEB1-220ENST00000560909 MYH1P12882 1939 aa6.42□□□□□ -1.38
ZEB1-220ENST00000560909 NAV1Q8NEY1 1877 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 GREB1LQ9C091 1923 aaPredicted RBP6.41□□□□□ -1.38
ZEB1-220ENST00000560909 POLR2AP24928 1970 aaKnown RBP6.41□□□□□ -1.38
ZEB1-220ENST00000560909 TSPY2A6NKD2 308 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 TRAF5O00463 557 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 IFIT3O14879 490 aaKnown RBP6.41□□□□□ -1.38
ZEB1-220ENST00000560909 TRIM66O15016 1216 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 NMT2O60551 498 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 TOMM70O94826 608 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 TTLL1O95922 423 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 GH2P01242 217 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 TSPY3P0CV98 308 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 TSPY8P0CW00 308 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 FDX1P10109 184 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 TOP1P11387 765 aaKnown RBP6.41□□□□□ -1.38
ZEB1-220ENST00000560909 INPP5BP32019 993 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 AK2P54819 239 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 FSTL1Q12841 308 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 CUL4AQ13619 759 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 SEPT2Q15019 361 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 SART3Q15020 963 aaKnown RBP6.41□□□□□ -1.38
ZEB1-220ENST00000560909 PPP2R5BQ15173 497 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 SHROOM1Q2M3G4 852 aaPredicted RBP6.41□□□□□ -1.38
ZEB1-220ENST00000560909 SLC4A8Q2Y0W8 1093 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 Q6ZUG5 572 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 TRMT44Q8IYL2 757 aaKnown RBP6.41□□□□□ -1.38
ZEB1-220ENST00000560909 SCYL3Q8IZE3 742 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 ZNF784Q8NCA9 323 aaPredicted RBP6.41□□□□□ -1.38
ZEB1-220ENST00000560909 CEP95Q96GE4 821 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 ZSCAN31Q96LW9 406 aaPredicted RBP6.41□□□□□ -1.38
ZEB1-220ENST00000560909 TMEM47Q9BQJ4 181 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 UBAC1Q9BSL1 405 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 TBC1D2Q9BYX2 928 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 BRPF3Q9ULD4 1205 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 TPCN1Q9ULQ1 816 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 LIMCH1Q9UPQ0 1083 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 TMX2Q9Y320 296 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 TNKSO95271 1327 aa6.41□□□□□ -1.38
ZEB1-220ENST00000560909 LAMB1P07942 1786 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 A0A1W2PRG0 241 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 SPDYE5A6NIY4 337 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 USP17L5A8MUK1 530 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 PLA2G6O60733 806 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 PFKFB2O60825 505 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 DDAH1O94760 285 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 PTPRAP18433 802 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 YY1P25490 414 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 SMARCA1P28370 1054 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 PDIA3P30101 505 aaKnown RBP6.4□□□□□ -1.38
ZEB1-220ENST00000560909 NF2P35240 595 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 IREB2P48200 963 aaKnown RBP6.4□□□□□ -1.38
ZEB1-220ENST00000560909 ST3GAL1Q11201 340 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 WTAPQ15007 396 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 TMEM67Q5HYA8 995 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 SH3D19Q5HYK7 790 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 RRP12Q5JTH9 1297 aaKnown RBP6.4□□□□□ -1.38
ZEB1-220ENST00000560909 APOA5Q6Q788 366 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 CHST3Q7LGC8 479 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 ARMC9Q7Z3E5 817 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 PARP9Q8IXQ6 854 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 ANKRD13AQ8IZ07 590 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 STK11IPQ8N1F8 1099 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 SMC1BQ8NDV3 1235 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 GMCL1P1Q8NEA9 526 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 BRF1Q92994 677 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 TRIM11Q96F44 468 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 TMX3Q96JJ7 454 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 C12orf42Q96LP6 360 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 TCEANC2Q96MN5 208 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 WRNIP1Q96S55 665 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 PLVAPQ9BX97 442 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 TRIM34Q9BYJ4 488 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 LRRC2Q9BYS8 371 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 KIAA1683Q9H0B3 1180 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 CABP5Q9NP86 173 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 SH2B1Q9NRF2 756 aaPredicted RBP6.4□□□□□ -1.38
ZEB1-220ENST00000560909 MAP10Q9P2G4 905 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 KCNH4Q9UQ05 1017 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 DYRK1BQ9Y463 629 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 AFG3L2Q9Y4W6 797 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 SNCAIPQ9Y6H5 919 aa6.4□□□□□ -1.38
ZEB1-220ENST00000560909 PALM3A6NDB9 673 aaPredicted RBP6.39□□□□□ -1.39
ZEB1-220ENST00000560909 CXCL11O14625 94 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 CALM1P0DP23 149 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 CALM2P0DP24 149 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 CALM3P0DP25 149 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 EPXP11678 715 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 EEF2P13639 858 aaKnown RBP6.39□□□□□ -1.39
ZEB1-220ENST00000560909 GJA5P36382 358 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 ICA1Q05084 483 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 PPATQ06203 517 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms