RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 SLFN13Q68D06 897 aa11.83□□□□□ -0.52
TPM1-225ENST00000560679 IQSEC1Q6DN90 963 aa11.83□□□□□ -0.52
TPM1-225ENST00000560679 TMCO2Q7Z6W1 182 aaPredicted RBP11.83□□□□□ -0.52
TPM1-225ENST00000560679 SIRT2Q8IXJ6 389 aa11.83□□□□□ -0.52
TPM1-225ENST00000560679 TRERF1Q96PN7 1200 aa11.83□□□□□ -0.52
TPM1-225ENST00000560679 BCL11AQ9H165 835 aa11.83□□□□□ -0.52
TPM1-225ENST00000560679 VTA1Q9NP79 307 aa11.83□□□□□ -0.52
TPM1-225ENST00000560679 SIP14410 1827 aa11.83□□□□□ -0.52
TPM1-225ENST00000560679 USP34Q70CQ2 3546 aa11.82□□□□□ -0.52
TPM1-225ENST00000560679 TRIOO75962 3097 aa11.82□□□□□ -0.52
TPM1-225ENST00000560679 MINDY4BA8MYZ0 360 aa11.82□□□□□ -0.52
TPM1-225ENST00000560679 PRR33A8MZF0 331 aa11.82□□□□□ -0.52
TPM1-225ENST00000560679 PITPNM1O00562 1244 aa11.82□□□□□ -0.52
TPM1-225ENST00000560679 TTLL1O95922 423 aa11.82□□□□□ -0.52
TPM1-225ENST00000560679 SUPT20HL2P0C7V6 817 aa11.82□□□□□ -0.52
TPM1-225ENST00000560679 ALAS1P13196 640 aa11.82□□□□□ -0.52
TPM1-225ENST00000560679 SNAP25P60880 206 aa11.82□□□□□ -0.52
TPM1-225ENST00000560679 KIAA1211Q6ZU35 1233 aa11.82□□□□□ -0.52
TPM1-225ENST00000560679 UBE2ZQ9H832 354 aaPredicted RBP11.82□□□□□ -0.52
TPM1-225ENST00000560679 MYL3P08590 195 aa11.81□□□□□ -0.52
TPM1-225ENST00000560679 FDX1P10109 184 aa11.81□□□□□ -0.52
TPM1-225ENST00000560679 MRE11P49959 708 aa11.81□□□□□ -0.52
TPM1-225ENST00000560679 WDR5P61964 334 aaKnown RBP11.81□□□□□ -0.52
TPM1-225ENST00000560679 GPNMBQ14956 572 aa11.81□□□□□ -0.52
TPM1-225ENST00000560679 NBPF20Q3BBV1 942 aa11.81□□□□□ -0.52
TPM1-225ENST00000560679 TKFCQ3LXA3 575 aa11.81□□□□□ -0.52
TPM1-225ENST00000560679 GIMAP6Q6P9H5 292 aa11.81□□□□□ -0.52
TPM1-225ENST00000560679 FAM178BQ8IXR5 827 aa11.81□□□□□ -0.52
TPM1-225ENST00000560679 PANK1Q8TE04 598 aa11.81□□□□□ -0.52
TPM1-225ENST00000560679 OSBP2Q969R2 916 aa11.81□□□□□ -0.52
TPM1-225ENST00000560679 CHMP4CQ96CF2 233 aa11.81□□□□□ -0.52
TPM1-225ENST00000560679 GMCL1Q96IK5 515 aa11.81□□□□□ -0.52
TPM1-225ENST00000560679 CTAGE1Q96RT6 745 aa11.81□□□□□ -0.52
TPM1-225ENST00000560679 MTG1Q9BT17 334 aaPredicted RBP11.81□□□□□ -0.52
TPM1-225ENST00000560679 POLR3EQ9NVU0 708 aa11.81□□□□□ -0.52
TPM1-225ENST00000560679 ZNF318Q5VUA4 2279 aa11.8□□□□□ -0.52
TPM1-225ENST00000560679 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.8□□□□□ -0.52
TPM1-225ENST00000560679 RBM47A0AV96 593 aaKnown RBP11.8□□□□□ -0.52
TPM1-225ENST00000560679 BAIAP3O94812 1187 aa11.8□□□□□ -0.52
TPM1-225ENST00000560679 DEFB103AP81534 67 aa11.8□□□□□ -0.52
TPM1-225ENST00000560679 TCTN1Q2MV58 587 aa11.8□□□□□ -0.52
TPM1-225ENST00000560679 FAM160B2Q86V87 743 aa11.8□□□□□ -0.52
TPM1-225ENST00000560679 GJD3Q8N144 294 aa11.8□□□□□ -0.52
TPM1-225ENST00000560679 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.8□□□□□ -0.52
TPM1-225ENST00000560679 STAG1Q8WVM7 1258 aa11.8□□□□□ -0.52
TPM1-225ENST00000560679 WDR11Q9BZH6 1224 aa11.8□□□□□ -0.52
TPM1-225ENST00000560679 FTOQ9C0B1 505 aaKnown RBP eCLIP11.8□□□□□ -0.52
TPM1-225ENST00000560679 ISY1Q9ULR0 285 aaKnown RBP11.8□□□□□ -0.52
TPM1-225ENST00000560679 C5orf42Q9H799 3197 aa11.8□□□□□ -0.52
TPM1-225ENST00000560679 TRIP12Q14669 1992 aaPredicted RBP11.79□□□□□ -0.52
TPM1-225ENST00000560679 KIF28PB7ZC32 967 aa11.79□□□□□ -0.52
TPM1-225ENST00000560679 IL9P15248 144 aa11.79□□□□□ -0.52
TPM1-225ENST00000560679 SLC1A4P43007 532 aa11.79□□□□□ -0.52
TPM1-225ENST00000560679 CPT1AP50416 773 aa11.79□□□□□ -0.52
TPM1-225ENST00000560679 ALDH5A1P51649 535 aaPredicted RBP11.79□□□□□ -0.52
TPM1-225ENST00000560679 NHLH1Q02575 133 aa11.79□□□□□ -0.52
TPM1-225ENST00000560679 IKQ13123 557 aaPredicted RBP11.79□□□□□ -0.52
TPM1-225ENST00000560679 LEXMQ3ZCV2 418 aa11.79□□□□□ -0.52
TPM1-225ENST00000560679 FAM47CQ5HY64 1035 aa11.79□□□□□ -0.52
TPM1-225ENST00000560679 ZSCAN25Q6NSZ9 544 aa11.79□□□□□ -0.52
TPM1-225ENST00000560679 NFRKBQ6P4R8 1299 aa11.79□□□□□ -0.52
TPM1-225ENST00000560679 NSMFQ6X4W1 530 aa11.79□□□□□ -0.52
TPM1-225ENST00000560679 KCTD1Q719H9 257 aa11.79□□□□□ -0.52
TPM1-225ENST00000560679 OR6J1Q8NGC5 347 aa11.79□□□□□ -0.52
TPM1-225ENST00000560679 NEDD1Q8NHV4 660 aa11.79□□□□□ -0.52
TPM1-225ENST00000560679 SUGCTQ9HAC7 445 aa11.79□□□□□ -0.52
TPM1-225ENST00000560679 LMCD1Q9NZU5 365 aa11.79□□□□□ -0.52
TPM1-225ENST00000560679 MTUS1Q9ULD2 1270 aa11.79□□□□□ -0.52
TPM1-225ENST00000560679 PRR12Q9ULL5 1215 aa11.79□□□□□ -0.52
TPM1-225ENST00000560679 LINC01553A4QN01 128 aa11.78□□□□□ -0.52
TPM1-225ENST00000560679 M0R2C6 588 aa11.78□□□□□ -0.52
TPM1-225ENST00000560679 NFIBO00712 420 aa11.78□□□□□ -0.52
TPM1-225ENST00000560679 GPAA1O43292 621 aa11.78□□□□□ -0.52
TPM1-225ENST00000560679 PLA2G6O60733 806 aa11.78□□□□□ -0.52
TPM1-225ENST00000560679 RAB11FIP3O75154 756 aa11.78□□□□□ -0.52
TPM1-225ENST00000560679 KCNA5P22460 613 aa11.78□□□□□ -0.52
TPM1-225ENST00000560679 MCCP23508 829 aa11.78□□□□□ -0.52
TPM1-225ENST00000560679 KCNJ6P48051 423 aa11.78□□□□□ -0.52
TPM1-225ENST00000560679 TDO2P48775 406 aa11.78□□□□□ -0.52
TPM1-225ENST00000560679 SLC30A10Q6XR72 485 aa11.78□□□□□ -0.52
TPM1-225ENST00000560679 ZNF444Q8N0Y2 327 aaPredicted RBP11.78□□□□□ -0.52
TPM1-225ENST00000560679 CHURC1Q8WUH1 139 aa11.78□□□□□ -0.52
TPM1-225ENST00000560679 DHX38Q92620 1227 aaKnown RBP11.78□□□□□ -0.52
TPM1-225ENST00000560679 APPBP2Q92624 585 aa11.78□□□□□ -0.52
TPM1-225ENST00000560679 COPS5Q92905 334 aa11.78□□□□□ -0.52
TPM1-225ENST00000560679 CCPG1Q9ULG6 757 aa11.78□□□□□ -0.52
TPM1-225ENST00000560679 SUPT16HQ9Y5B9 1047 aaKnown RBP11.78□□□□□ -0.52
TPM1-225ENST00000560679 A6NJR5 290 aa11.77□□□□□ -0.53
TPM1-225ENST00000560679 ICAM1P05362 532 aa11.77□□□□□ -0.53
TPM1-225ENST00000560679 TSPY3P0CV98 308 aa11.77□□□□□ -0.53
TPM1-225ENST00000560679 TSPY8P0CW00 308 aa11.77□□□□□ -0.53
TPM1-225ENST00000560679 ERVK-21P61565 698 aa11.77□□□□□ -0.53
TPM1-225ENST00000560679 PTPN11Q06124 597 aaPredicted RBP11.77□□□□□ -0.53
TPM1-225ENST00000560679 BAATQ14032 418 aaPredicted RBP11.77□□□□□ -0.53
TPM1-225ENST00000560679 RETREG2Q8NC44 543 aa11.77□□□□□ -0.53
TPM1-225ENST00000560679 ANKS1AQ92625 1134 aa11.77□□□□□ -0.53
TPM1-225ENST00000560679 SNX27Q96L92 541 aa11.77□□□□□ -0.53
TPM1-225ENST00000560679 RANBP17Q9H2T7 1088 aaKnown RBP11.77□□□□□ -0.53
TPM1-225ENST00000560679 ATG2AQ2TAZ0 1938 aa11.77□□□□□ -0.53
TPM1-225ENST00000560679 NBNO60934 754 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms