RNA–Protein interactions for RNA: ENST00000560673.1

KNSTRN-211, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-211ENST00000560673 CNKSR3Q6P9H4 555 aa13.77□□□□□ -0.21
KNSTRN-211ENST00000560673 FRMD5Q7Z6J6 570 aa13.77□□□□□ -0.21
KNSTRN-211ENST00000560673 SIAH1Q8IUQ4 282 aa13.77□□□□□ -0.21
KNSTRN-211ENST00000560673 WDR63Q8IWG1 891 aa13.77□□□□□ -0.21
KNSTRN-211ENST00000560673 SAMD11Q96NU1 681 aa13.77□□□□□ -0.21
KNSTRN-211ENST00000560673 TANC1Q9C0D5 1861 aa13.77□□□□□ -0.21
KNSTRN-211ENST00000560673 FOXD4L1Q9NU39 408 aa13.77□□□□□ -0.21
KNSTRN-211ENST00000560673 POLR3EQ9NVU0 708 aa13.77□□□□□ -0.21
KNSTRN-211ENST00000560673 ABHD14A-ACY1A0A1B0GW23 586 aa13.76□□□□□ -0.21
KNSTRN-211ENST00000560673 H3BNC9 293 aa13.76□□□□□ -0.21
KNSTRN-211ENST00000560673 EFCAB14O75071 495 aa13.76□□□□□ -0.21
KNSTRN-211ENST00000560673 PTGS1P23219 599 aa13.76□□□□□ -0.21
KNSTRN-211ENST00000560673 GPM6BQ13491 265 aa13.76□□□□□ -0.21
KNSTRN-211ENST00000560673 CTC1Q2NKJ3 1217 aa13.76□□□□□ -0.21
KNSTRN-211ENST00000560673 ERICH6BQ5W0A0 696 aa13.76□□□□□ -0.21
KNSTRN-211ENST00000560673 CLEC10AQ8IUN9 316 aa13.76□□□□□ -0.21
KNSTRN-211ENST00000560673 NOD1Q9Y239 953 aa13.76□□□□□ -0.21
KNSTRN-211ENST00000560673 CEP250Q9BV73 2442 aa13.75□□□□□ -0.21
KNSTRN-211ENST00000560673 RAD21O60216 631 aa13.75□□□□□ -0.21
KNSTRN-211ENST00000560673 CYP2E1P05181 493 aaPredicted RBP13.75□□□□□ -0.21
KNSTRN-211ENST00000560673 DLX2Q07687 328 aaPredicted RBP13.75□□□□□ -0.21
KNSTRN-211ENST00000560673 MKRN4PQ13434 485 aaPredicted RBP13.75□□□□□ -0.21
KNSTRN-211ENST00000560673 IQSEC1Q6DN90 963 aa13.75□□□□□ -0.21
KNSTRN-211ENST00000560673 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.75□□□□□ -0.21
KNSTRN-211ENST00000560673 CCDC155Q8N6L0 562 aa13.75□□□□□ -0.21
KNSTRN-211ENST00000560673 GPHNQ9NQX3 736 aaPredicted RBP13.75□□□□□ -0.21
KNSTRN-211ENST00000560673 FBXO40Q9UH90 709 aa13.75□□□□□ -0.21
KNSTRN-211ENST00000560673 CD207Q9UJ71 328 aa13.75□□□□□ -0.21
KNSTRN-211ENST00000560673 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.75□□□□□ -0.21
KNSTRN-211ENST00000560673 MAP1BP46821 2468 aaKnown RBP13.75□□□□□ -0.21
KNSTRN-211ENST00000560673 ASB14A6NK59 587 aa13.74□□□□□ -0.21
KNSTRN-211ENST00000560673 LOC730098B7Z3J9 87 aa13.74□□□□□ -0.21
KNSTRN-211ENST00000560673 PURAQ00577 322 aaKnown RBP13.74□□□□□ -0.21
KNSTRN-211ENST00000560673 PUM1Q14671 1186 aaKnown RBP eCLIP13.74□□□□□ -0.21
KNSTRN-211ENST00000560673 FAM83BQ5T0W9 1011 aa13.74□□□□□ -0.21
KNSTRN-211ENST00000560673 NFRKBQ6P4R8 1299 aa13.74□□□□□ -0.21
KNSTRN-211ENST00000560673 CPXCR1Q8N123 301 aa13.74□□□□□ -0.21
KNSTRN-211ENST00000560673 AFAP1L1Q8TED9 768 aa13.74□□□□□ -0.21
KNSTRN-211ENST00000560673 SLF1Q9BQI6 1058 aa13.74□□□□□ -0.21
KNSTRN-211ENST00000560673 MTG1Q9BT17 334 aaPredicted RBP13.74□□□□□ -0.21
KNSTRN-211ENST00000560673 GOPCQ9HD26 462 aa13.74□□□□□ -0.21
KNSTRN-211ENST00000560673 HDAC5Q9UQL6 1122 aa13.74□□□□□ -0.21
KNSTRN-211ENST00000560673 CTDP1Q9Y5B0 961 aaPredicted RBP13.74□□□□□ -0.21
KNSTRN-211ENST00000560673 SPTBN2O15020 2390 aa13.73□□□□□ -0.21
KNSTRN-211ENST00000560673 ATP2A1O14983 1001 aa13.73□□□□□ -0.21
KNSTRN-211ENST00000560673 PARNO95453 639 aaKnown RBP13.73□□□□□ -0.21
KNSTRN-211ENST00000560673 MYL3P08590 195 aa13.73□□□□□ -0.21
KNSTRN-211ENST00000560673 CNTN2Q02246 1040 aa13.73□□□□□ -0.21
KNSTRN-211ENST00000560673 IKBKEQ14164 716 aa13.73□□□□□ -0.21
KNSTRN-211ENST00000560673 CBX2Q14781 532 aaPredicted RBP13.73□□□□□ -0.21
KNSTRN-211ENST00000560673 TTC39AQ5SRH9 613 aa13.73□□□□□ -0.21
KNSTRN-211ENST00000560673 CHST13Q8NET6 341 aa13.73□□□□□ -0.21
KNSTRN-211ENST00000560673 CAGE1Q8TC20 777 aa13.73□□□□□ -0.21
KNSTRN-211ENST00000560673 PDGFCQ9NRA1 345 aa13.73□□□□□ -0.21
KNSTRN-211ENST00000560673 USP24Q9UPU5 2620 aa13.72□□□□□ -0.21
KNSTRN-211ENST00000560673 ZBED4O75132 1171 aa13.72□□□□□ -0.21
KNSTRN-211ENST00000560673 AKR1B1P15121 316 aa13.72□□□□□ -0.21
KNSTRN-211ENST00000560673 CPT1AP50416 773 aa13.72□□□□□ -0.21
KNSTRN-211ENST00000560673 PTPN11Q06124 597 aaPredicted RBP13.72□□□□□ -0.21
KNSTRN-211ENST00000560673 HYAL1Q12794 435 aa13.72□□□□□ -0.21
KNSTRN-211ENST00000560673 COL9A2Q14055 689 aaPredicted RBP13.72□□□□□ -0.21
KNSTRN-211ENST00000560673 GPNMBQ14956 572 aa13.72□□□□□ -0.21
KNSTRN-211ENST00000560673 ST3GAL2Q16842 350 aa13.72□□□□□ -0.21
KNSTRN-211ENST00000560673 MRPL50Q8N5N7 158 aaKnown RBP13.72□□□□□ -0.21
KNSTRN-211ENST00000560673 SP7Q8TDD2 431 aaPredicted RBP13.72□□□□□ -0.21
KNSTRN-211ENST00000560673 COL26A1Q96A83 441 aa13.72□□□□□ -0.21
KNSTRN-211ENST00000560673 RIPOR3Q96MK2 946 aa13.72□□□□□ -0.21
KNSTRN-211ENST00000560673 MCM9Q9NXL9 1143 aa13.72□□□□□ -0.21
KNSTRN-211ENST00000560673 SWAP70Q9UH65 585 aa13.72□□□□□ -0.21
KNSTRN-211ENST00000560673 USP17L12C9JPN9 530 aa13.71□□□□□ -0.21
KNSTRN-211ENST00000560673 USP17L21D6R901 530 aa13.71□□□□□ -0.21
KNSTRN-211ENST00000560673 TBX10O75333 385 aa13.71□□□□□ -0.21
KNSTRN-211ENST00000560673 CXCL10P02778 98 aa13.71□□□□□ -0.21
KNSTRN-211ENST00000560673 EEF2P13639 858 aaKnown RBP13.71□□□□□ -0.21
KNSTRN-211ENST00000560673 SELPP16109 830 aa13.71□□□□□ -0.21
KNSTRN-211ENST00000560673 HTRA4P83105 476 aaPredicted RBP13.71□□□□□ -0.21
KNSTRN-211ENST00000560673 CCDC158Q5M9N0 1113 aa13.71□□□□□ -0.21
KNSTRN-211ENST00000560673 TMEM63BQ5T3F8 832 aa13.71□□□□□ -0.21
KNSTRN-211ENST00000560673 TAPT1Q6NXT6 567 aa13.71□□□□□ -0.21
KNSTRN-211ENST00000560673 KIAA1211Q6ZU35 1233 aa13.71□□□□□ -0.21
KNSTRN-211ENST00000560673 LRRC8DQ7L1W4 858 aa13.71□□□□□ -0.21
KNSTRN-211ENST00000560673 TMEM192Q8IY95 271 aa13.71□□□□□ -0.21
KNSTRN-211ENST00000560673 FAM133AQ8N9E0 248 aa13.71□□□□□ -0.21
KNSTRN-211ENST00000560673 PRPF38AQ8NAV1 312 aaKnown RBP13.71□□□□□ -0.21
KNSTRN-211ENST00000560673 PIH1D3Q9NQM4 214 aaKnown RBP13.71□□□□□ -0.21
KNSTRN-211ENST00000560673 IDH1O75874 414 aaKnown RBP13.7□□□□□ -0.22
KNSTRN-211ENST00000560673 EYA4O95677 639 aa13.7□□□□□ -0.22
KNSTRN-211ENST00000560673 PDGFBP01127 241 aaPredicted RBP13.7□□□□□ -0.22
KNSTRN-211ENST00000560673 ICAM3P32942 547 aa13.7□□□□□ -0.22
KNSTRN-211ENST00000560673 EVX2Q03828 476 aa13.7□□□□□ -0.22
KNSTRN-211ENST00000560673 PTGISQ16647 500 aa13.7□□□□□ -0.22
KNSTRN-211ENST00000560673 BRDTQ58F21 947 aaPredicted RBP13.7□□□□□ -0.22
KNSTRN-211ENST00000560673 EEPD1Q7L9B9 569 aa13.7□□□□□ -0.22
KNSTRN-211ENST00000560673 FBXO11Q86XK2 927 aa13.7□□□□□ -0.22
KNSTRN-211ENST00000560673 FBXO16Q8IX29 292 aaPredicted RBP13.7□□□□□ -0.22
KNSTRN-211ENST00000560673 PPP1R13LQ8WUF5 828 aa13.7□□□□□ -0.22
KNSTRN-211ENST00000560673 IGFLR1Q9H665 355 aa13.7□□□□□ -0.22
KNSTRN-211ENST00000560673 RAVER2Q9HCJ3 691 aaKnown RBP13.7□□□□□ -0.22
KNSTRN-211ENST00000560673 SALL2Q9Y467 1007 aaPredicted RBP13.7□□□□□ -0.22
KNSTRN-211ENST00000560673 TRIP12Q14669 1992 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms