RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 RNF111Q6ZNA4 994 aa5.92□□□□□ -1.46
TMOD3-207ENST00000560549 WAPLQ7Z5K2 1190 aa5.92□□□□□ -1.46
TMOD3-207ENST00000560549 C7orf61Q8IZ16 206 aa5.92□□□□□ -1.46
TMOD3-207ENST00000560549 LINC00116Q8NCU8 138 aa5.92□□□□□ -1.46
TMOD3-207ENST00000560549 UBXN4Q92575 508 aa5.92□□□□□ -1.46
TMOD3-207ENST00000560549 SEC16BQ96JE7 1060 aa5.92□□□□□ -1.46
TMOD3-207ENST00000560549 HHIPL1Q96JK4 782 aa5.92□□□□□ -1.46
TMOD3-207ENST00000560549 DIRC2Q96SL1 478 aa5.92□□□□□ -1.46
TMOD3-207ENST00000560549 ASCC2Q9H1I8 757 aaPredicted RBP5.92□□□□□ -1.46
TMOD3-207ENST00000560549 NSUN3Q9H649 340 aaKnown RBP5.92□□□□□ -1.46
TMOD3-207ENST00000560549 PPP1R1BQ9UD71 204 aaPredicted RBP5.92□□□□□ -1.46
TMOD3-207ENST00000560549 FRMPD1Q5SYB0 1578 aa5.92□□□□□ -1.46
TMOD3-207ENST00000560549 MAST1Q9Y2H9 1570 aa5.92□□□□□ -1.46
TMOD3-207ENST00000560549 PLA2R1Q13018 1463 aa5.92□□□□□ -1.46
TMOD3-207ENST00000560549 SPATA31E1Q6ZUB1 1445 aa5.92□□□□□ -1.46
TMOD3-207ENST00000560549 FITM1A5D6W6 292 aa5.91□□□□□ -1.46
TMOD3-207ENST00000560549 TP53P04637 393 aaPredicted RBP5.91□□□□□ -1.46
TMOD3-207ENST00000560549 COL9A2Q14055 689 aaPredicted RBP5.91□□□□□ -1.46
TMOD3-207ENST00000560549 SYDE1Q6ZW31 735 aaPredicted RBP5.91□□□□□ -1.46
TMOD3-207ENST00000560549 CCDC144CPQ8IYA2 1237 aa5.91□□□□□ -1.46
TMOD3-207ENST00000560549 MAP6Q96JE9 813 aa5.91□□□□□ -1.46
TMOD3-207ENST00000560549 FBXL21Q9UKT6 434 aa5.91□□□□□ -1.46
TMOD3-207ENST00000560549 PCDHB10Q9UN67 800 aa5.91□□□□□ -1.46
TMOD3-207ENST00000560549 SCAPERQ9BY12 1400 aa5.91□□□□□ -1.46
TMOD3-207ENST00000560549 FAM135AQ9P2D6 1515 aa5.9□□□□□ -1.46
TMOD3-207ENST00000560549 A0A1W2PQH9 124 aa5.9□□□□□ -1.46
TMOD3-207ENST00000560549 H0Y8X5 98 aa5.9□□□□□ -1.46
TMOD3-207ENST00000560549 RAP1GAPP47736 663 aa5.9□□□□□ -1.46
TMOD3-207ENST00000560549 PCBP3P57721 371 aaKnown RBP5.9□□□□□ -1.46
TMOD3-207ENST00000560549 ZNF445P59923 1031 aa5.9□□□□□ -1.46
TMOD3-207ENST00000560549 RTP2Q5QGT7 225 aa5.9□□□□□ -1.46
TMOD3-207ENST00000560549 OXR1Q8N573 874 aa5.9□□□□□ -1.46
TMOD3-207ENST00000560549 BRF1Q92994 677 aa5.9□□□□□ -1.46
TMOD3-207ENST00000560549 DNAJC2Q99543 621 aaKnown RBP5.9□□□□□ -1.46
TMOD3-207ENST00000560549 PLCD4Q9BRC7 762 aa5.9□□□□□ -1.46
TMOD3-207ENST00000560549 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.9□□□□□ -1.46
TMOD3-207ENST00000560549 SRRTQ9BXP5 876 aaKnown RBP5.9□□□□□ -1.46
TMOD3-207ENST00000560549 EPB41L4BQ9H329 900 aa5.9□□□□□ -1.46
TMOD3-207ENST00000560549 ERVK13-1Q9NX77 482 aa5.9□□□□□ -1.46
TMOD3-207ENST00000560549 ZNF214Q9UL59 606 aaPredicted RBP5.9□□□□□ -1.46
TMOD3-207ENST00000560549 ZNF451Q9Y4E5 1061 aa5.9□□□□□ -1.46
TMOD3-207ENST00000560549 ZNF518AQ6AHZ1 1483 aa5.9□□□□□ -1.46
TMOD3-207ENST00000560549 POGZQ7Z3K3 1410 aa5.9□□□□□ -1.46
TMOD3-207ENST00000560549 ABCC1P33527 1531 aa5.9□□□□□ -1.47
TMOD3-207ENST00000560549 ZMYM4Q5VZL5 1548 aa5.9□□□□□ -1.47
TMOD3-207ENST00000560549 ZNF205O95201 554 aa5.9□□□□□ -1.47
TMOD3-207ENST00000560549 C1QTNF9P0C862 333 aa5.9□□□□□ -1.47
TMOD3-207ENST00000560549 ATP2B1P20020 1258 aa5.9□□□□□ -1.47
TMOD3-207ENST00000560549 CFPP27918 469 aa5.9□□□□□ -1.47
TMOD3-207ENST00000560549 GTF2F1P35269 517 aaKnown RBP eCLIP5.9□□□□□ -1.47
TMOD3-207ENST00000560549 EIF6P56537 245 aaKnown RBP5.9□□□□□ -1.47
TMOD3-207ENST00000560549 CHRNEQ04844 493 aa5.9□□□□□ -1.47
TMOD3-207ENST00000560549 FBLN7Q53RD9 439 aa5.9□□□□□ -1.47
TMOD3-207ENST00000560549 LCE4AQ5TA78 99 aa5.9□□□□□ -1.47
TMOD3-207ENST00000560549 IRF2BP1Q8IU81 584 aa5.9□□□□□ -1.47
TMOD3-207ENST00000560549 ANKS4BQ8N8V4 417 aa5.9□□□□□ -1.47
TMOD3-207ENST00000560549 KLHL6Q8WZ60 621 aa5.9□□□□□ -1.47
TMOD3-207ENST00000560549 DHRS1Q96LJ7 313 aa5.9□□□□□ -1.47
TMOD3-207ENST00000560549 ZNF408Q9H9D4 720 aa5.9□□□□□ -1.47
TMOD3-207ENST00000560549 GP6Q9HCN6 339 aa5.9□□□□□ -1.47
TMOD3-207ENST00000560549 CD320Q9NPF0 282 aa5.9□□□□□ -1.47
TMOD3-207ENST00000560549 AP5S1Q9NUS5 200 aa5.9□□□□□ -1.47
TMOD3-207ENST00000560549 CCDC7Q96M83 1385 aa5.89□□□□□ -1.47
TMOD3-207ENST00000560549 ARHGEF40Q8TER5 1519 aa5.89□□□□□ -1.47
TMOD3-207ENST00000560549 SPAG9O60271 1321 aaKnown RBP5.89□□□□□ -1.47
TMOD3-207ENST00000560549 KIF7Q2M1P5 1343 aa5.89□□□□□ -1.47
TMOD3-207ENST00000560549 MAGI2Q86UL8 1455 aa5.89□□□□□ -1.47
TMOD3-207ENST00000560549 CD247P20963 164 aa5.89□□□□□ -1.47
TMOD3-207ENST00000560549 GLDCP23378 1020 aa5.89□□□□□ -1.47
TMOD3-207ENST00000560549 BMP8BP34820 402 aa5.89□□□□□ -1.47
TMOD3-207ENST00000560549 ETFBP38117 255 aa5.89□□□□□ -1.47
TMOD3-207ENST00000560549 RBL2Q08999 1139 aa5.89□□□□□ -1.47
TMOD3-207ENST00000560549 DUSP4Q13115 394 aa5.89□□□□□ -1.47
TMOD3-207ENST00000560549 SNX17Q15036 470 aa5.89□□□□□ -1.47
TMOD3-207ENST00000560549 NLRX1Q86UT6 975 aa5.89□□□□□ -1.47
TMOD3-207ENST00000560549 TMEM52Q8NDY8 209 aa5.89□□□□□ -1.47
TMOD3-207ENST00000560549 ARMC5Q96C12 935 aa5.89□□□□□ -1.47
TMOD3-207ENST00000560549 CWC22Q9HCG8 908 aaKnown RBP5.89□□□□□ -1.47
TMOD3-207ENST00000560549 DCP1AQ9NPI6 582 aaPredicted RBP5.89□□□□□ -1.47
TMOD3-207ENST00000560549 PRR13Q9NZ81 148 aa5.89□□□□□ -1.47
TMOD3-207ENST00000560549 GPR160Q9UJ42 338 aa5.89□□□□□ -1.47
TMOD3-207ENST00000560549 YBX2Q9Y2T7 364 aaKnown RBP5.89□□□□□ -1.47
TMOD3-207ENST00000560549 UHRF1BP1Q6BDS2 1440 aa5.89□□□□□ -1.47
TMOD3-207ENST00000560549 KDM5CP41229 1560 aa5.88□□□□□ -1.47
TMOD3-207ENST00000560549 ADAMTS20P59510 1910 aa5.88□□□□□ -1.47
TMOD3-207ENST00000560549 PLXNC1O60486 1568 aa5.88□□□□□ -1.47
TMOD3-207ENST00000560549 FADS2P1A8MWK0 482 aa5.88□□□□□ -1.47
TMOD3-207ENST00000560549 CCER2I3L3R5 266 aa5.88□□□□□ -1.47
TMOD3-207ENST00000560549 ANP32CO43423 234 aa5.88□□□□□ -1.47
TMOD3-207ENST00000560549 VAV1P15498 845 aa5.88□□□□□ -1.47
TMOD3-207ENST00000560549 CCDC184Q52MB2 194 aa5.88□□□□□ -1.47
TMOD3-207ENST00000560549 ANKRD39Q53RE8 183 aa5.88□□□□□ -1.47
TMOD3-207ENST00000560549 SPPL2CQ8IUH8 684 aa5.88□□□□□ -1.47
TMOD3-207ENST00000560549 SIRT2Q8IXJ6 389 aa5.88□□□□□ -1.47
TMOD3-207ENST00000560549 SMARCC1Q92922 1105 aaPredicted RBP5.88□□□□□ -1.47
TMOD3-207ENST00000560549 INTS4Q96HW7 963 aaKnown RBP5.88□□□□□ -1.47
TMOD3-207ENST00000560549 FCRL2Q96LA5 508 aaPredicted RBP5.88□□□□□ -1.47
TMOD3-207ENST00000560549 TOX2Q96NM4 488 aa5.88□□□□□ -1.47
TMOD3-207ENST00000560549 SLC26A8Q96RN1 970 aa5.88□□□□□ -1.47
TMOD3-207ENST00000560549 SLC12A9Q9BXP2 914 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms