RNA–Protein interactions for RNA: ENST00000560444.1

PIF1-208, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 2

Gene PIF1, Length 1,631 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-208ENST00000560444 USP17L22D6RA61 530 aa26.86■■□□□ 1.89
PIF1-208ENST00000560444 USP17L17D6RBQ6 530 aa26.86■■□□□ 1.89
PIF1-208ENST00000560444 USP17L19D6RCP7 530 aa26.86■■□□□ 1.89
PIF1-208ENST00000560444 USP17L20D6RJB6 530 aa26.86■■□□□ 1.89
PIF1-208ENST00000560444 CDC25AP30304 524 aa26.86■■□□□ 1.89
PIF1-208ENST00000560444 USP17L24Q0WX57 530 aa26.86■■□□□ 1.89
PIF1-208ENST00000560444 SEMA3FQ13275 785 aa26.86■■□□□ 1.89
PIF1-208ENST00000560444 USP17L6PQ6QN14 398 aa26.86■■□□□ 1.89
PIF1-208ENST00000560444 CABP7Q86V35 215 aa26.86■■□□□ 1.89
PIF1-208ENST00000560444 RANBP17Q9H2T7 1088 aaKnown RBP26.86■■□□□ 1.89
PIF1-208ENST00000560444 RRAGDQ9NQL2 400 aaPredicted RBP26.86■■□□□ 1.89
PIF1-208ENST00000560444 GPRC5DQ9NZD1 345 aa26.86■■□□□ 1.89
PIF1-208ENST00000560444 DICER1Q9UPY3 1922 aaKnown RBP26.85■■□□□ 1.89
PIF1-208ENST00000560444 CYP3A7-CYP3A51PA0A087WV96 503 aa26.85■■□□□ 1.89
PIF1-208ENST00000560444 TDP2O95551 362 aa26.85■■□□□ 1.89
PIF1-208ENST00000560444 CYP3A7P24462 503 aa26.85■■□□□ 1.89
PIF1-208ENST00000560444 TECP42680 631 aa26.85■■□□□ 1.89
PIF1-208ENST00000560444 C9orf131Q5VYM1 1079 aa26.85■■□□□ 1.89
PIF1-208ENST00000560444 RASSF8Q8NHQ8 419 aa26.85■■□□□ 1.89
PIF1-208ENST00000560444 ANO3Q9BYT9 981 aa26.85■■□□□ 1.89
PIF1-208ENST00000560444 DDX25Q9UHL0 483 aaKnown RBP26.85■■□□□ 1.89
PIF1-208ENST00000560444 PIK3CDO00329 1044 aa26.84■■□□□ 1.89
PIF1-208ENST00000560444 ERCC5P28715 1186 aaPredicted RBP26.84■■□□□ 1.89
PIF1-208ENST00000560444 TXKP42681 527 aa26.84■■□□□ 1.89
PIF1-208ENST00000560444 SNAP25P60880 206 aa26.84■■□□□ 1.89
PIF1-208ENST00000560444 LPAR1Q92633 364 aa26.84■■□□□ 1.89
PIF1-208ENST00000560444 RMND1Q9NWS8 449 aa26.84■■□□□ 1.89
PIF1-208ENST00000560444 SLC37A4O43826 429 aa26.83■■□□□ 1.89
PIF1-208ENST00000560444 USH1GQ495M9 461 aa26.83■■□□□ 1.89
PIF1-208ENST00000560444 ENOX1Q8TC92 643 aaKnown RBP26.83■■□□□ 1.89
PIF1-208ENST00000560444 KIAA1683Q9H0B3 1180 aa26.83■■□□□ 1.89
PIF1-208ENST00000560444 ASTN2O75129 1339 aaPredicted RBP26.83■■□□□ 1.89
PIF1-208ENST00000560444 PP2D1A8MPX8 630 aa26.83■■□□□ 1.88
PIF1-208ENST00000560444 NAALADL2Q58DX5 795 aa26.83■■□□□ 1.88
PIF1-208ENST00000560444 DRC7Q8IY82 874 aa26.83■■□□□ 1.88
PIF1-208ENST00000560444 MBOAT7Q96N66 472 aa26.83■■□□□ 1.88
PIF1-208ENST00000560444 ZNF341Q9BYN7 854 aa26.83■■□□□ 1.88
PIF1-208ENST00000560444 SCAF8Q9UPN6 1271 aaKnown RBP26.83■■□□□ 1.88
PIF1-208ENST00000560444 PPP2R3BQ9Y5P8 575 aa26.83■■□□□ 1.88
PIF1-208ENST00000560444 UTRNP46939 3433 aa26.82■■□□□ 1.88
PIF1-208ENST00000560444 CLCN1P35523 988 aa26.82■■□□□ 1.88
PIF1-208ENST00000560444 CRYGNQ8WXF5 182 aa26.82■■□□□ 1.88
PIF1-208ENST00000560444 CALML4Q96GE6 196 aa26.82■■□□□ 1.88
PIF1-208ENST00000560444 FEZ1Q99689 392 aa26.82■■□□□ 1.88
PIF1-208ENST00000560444 MTRQ99707 1265 aa26.82■■□□□ 1.88
PIF1-208ENST00000560444 KBTBD4Q9NVX7 518 aa26.82■■□□□ 1.88
PIF1-208ENST00000560444 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.82■■□□□ 1.88
PIF1-208ENST00000560444 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.82■■□□□ 1.88
PIF1-208ENST00000560444 LRWD1Q9UFC0 647 aa26.82■■□□□ 1.88
PIF1-208ENST00000560444 ZNF112Q9UJU3 913 aa26.82■■□□□ 1.88
PIF1-208ENST00000560444 SPDYE3A6NKU9 549 aa26.81■■□□□ 1.88
PIF1-208ENST00000560444 NBPF12Q5TAG4 269 aaPredicted RBP26.81■■□□□ 1.88
PIF1-208ENST00000560444 SPC24Q8NBT2 197 aa26.81■■□□□ 1.88
PIF1-208ENST00000560444 KIFC2Q96AC6 838 aa26.81■■□□□ 1.88
PIF1-208ENST00000560444 GLIS2Q9BZE0 524 aaPredicted RBP26.81■■□□□ 1.88
PIF1-208ENST00000560444 WDR46O15213 610 aaKnown RBP26.8■■□□□ 1.88
PIF1-208ENST00000560444 ZYXQ15942 572 aaKnown RBP26.8■■□□□ 1.88
PIF1-208ENST00000560444 ANGEL2Q5VTE6 544 aaKnown RBP26.8■■□□□ 1.88
PIF1-208ENST00000560444 MRPL11Q9Y3B7 192 aaKnown RBP26.8■■□□□ 1.88
PIF1-208ENST00000560444 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.8■■□□□ 1.88
PIF1-208ENST00000560444 GRIN3BO60391 1043 aa26.79■■□□□ 1.88
PIF1-208ENST00000560444 CUL4BQ13620 913 aa26.79■■□□□ 1.88
PIF1-208ENST00000560444 OPLAHO14841 1288 aa26.79■■□□□ 1.88
PIF1-208ENST00000560444 SLC26A4O43511 780 aa26.79■■□□□ 1.88
PIF1-208ENST00000560444 SREBF1P36956 1147 aa26.79■■□□□ 1.88
PIF1-208ENST00000560444 ARHGAP4P98171 946 aa26.79■■□□□ 1.88
PIF1-208ENST00000560444 STAMQ92783 540 aa26.79■■□□□ 1.88
PIF1-208ENST00000560444 HAS1Q92839 578 aa26.79■■□□□ 1.88
PIF1-208ENST00000560444 MMTAG2Q9BU76 263 aaKnown RBP26.79■■□□□ 1.88
PIF1-208ENST00000560444 HSD3B7Q9H2F3 369 aa26.79■■□□□ 1.88
PIF1-208ENST00000560444 TTC12Q9H892 705 aaPredicted RBP26.79■■□□□ 1.88
PIF1-208ENST00000560444 MARCH6O60337 910 aa26.78■■□□□ 1.88
PIF1-208ENST00000560444 RPN1P04843 607 aaKnown RBP26.78■■□□□ 1.88
PIF1-208ENST00000560444 PLCG1P19174 1290 aa26.78■■□□□ 1.88
PIF1-208ENST00000560444 CASP1P29466 404 aa26.78■■□□□ 1.88
PIF1-208ENST00000560444 USP14P54578 494 aa26.78■■□□□ 1.88
PIF1-208ENST00000560444 AMPD3Q01432 767 aa26.78■■□□□ 1.88
PIF1-208ENST00000560444 BLZF1Q9H2G9 400 aa26.78■■□□□ 1.88
PIF1-208ENST00000560444 ABCB11O95342 1321 aa26.77■■□□□ 1.88
PIF1-208ENST00000560444 TBX3O15119 743 aa26.77■■□□□ 1.88
PIF1-208ENST00000560444 ZNF500O60304 480 aaPredicted RBP26.77■■□□□ 1.88
PIF1-208ENST00000560444 DDNO94850 711 aaPredicted RBP26.77■■□□□ 1.88
PIF1-208ENST00000560444 KCNB1Q14721 858 aa26.77■■□□□ 1.88
PIF1-208ENST00000560444 Q4G0T1 1027 aa26.77■■□□□ 1.88
PIF1-208ENST00000560444 KRT79Q5XKE5 535 aa26.77■■□□□ 1.88
PIF1-208ENST00000560444 SLFN12Q8IYM2 578 aa26.77■■□□□ 1.88
PIF1-208ENST00000560444 PRPF38AQ8NAV1 312 aaKnown RBP26.77■■□□□ 1.88
PIF1-208ENST00000560444 TRPM4Q8TD43 1214 aa26.77■■□□□ 1.88
PIF1-208ENST00000560444 WDR18Q9BV38 432 aa26.77■■□□□ 1.88
PIF1-208ENST00000560444 KCNMB3Q9NPA1 279 aa26.77■■□□□ 1.88
PIF1-208ENST00000560444 STK17AQ9UEE5 414 aa26.77■■□□□ 1.88
PIF1-208ENST00000560444 PCDHA12Q9UN75 941 aa26.77■■□□□ 1.88
PIF1-208ENST00000560444 CYP3A4P08684 503 aa26.76■■□□□ 1.87
PIF1-208ENST00000560444 LMOD1P29536 600 aaPredicted RBP26.76■■□□□ 1.87
PIF1-208ENST00000560444 CIITAP33076 1130 aa26.76■■□□□ 1.87
PIF1-208ENST00000560444 ZNF658Q5TYW1 1059 aaPredicted RBP26.76■■□□□ 1.87
PIF1-208ENST00000560444 CCDC84Q86UT8 332 aaPredicted RBP26.76■■□□□ 1.87
PIF1-208ENST00000560444 SCYL3Q8IZE3 742 aa26.76■■□□□ 1.87
PIF1-208ENST00000560444 GTPBP4Q9BZE4 634 aaKnown RBP26.76■■□□□ 1.87
PIF1-208ENST00000560444 AS3MTQ9HBK9 375 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms